RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 RHOQP17081 205 aa14.55□□□□□ -0.08
SUPT16H-208ENST00000557652 GRIA2P42262 883 aa14.55□□□□□ -0.08
SUPT16H-208ENST00000557652 CDH18Q13634 790 aa14.55□□□□□ -0.08
SUPT16H-208ENST00000557652 GAB4Q2WGN9 574 aa14.55□□□□□ -0.08
SUPT16H-208ENST00000557652 DGKKQ5KSL6 1271 aa14.55□□□□□ -0.08
SUPT16H-208ENST00000557652 RFWD3Q6PCD5 774 aa14.55□□□□□ -0.08
SUPT16H-208ENST00000557652 CYP4V2Q6ZWL3 525 aaPredicted RBP14.55□□□□□ -0.08
SUPT16H-208ENST00000557652 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.55□□□□□ -0.08
SUPT16H-208ENST00000557652 LRRC57Q8N9N7 239 aa14.55□□□□□ -0.08
SUPT16H-208ENST00000557652 TRIM58Q8NG06 486 aa14.55□□□□□ -0.08
SUPT16H-208ENST00000557652 PRICKLE1Q96MT3 831 aaPredicted RBP14.55□□□□□ -0.08
SUPT16H-208ENST00000557652 PNKPQ96T60 521 aa14.55□□□□□ -0.08
SUPT16H-208ENST00000557652 P2RY13Q9BPV8 354 aa14.55□□□□□ -0.08
SUPT16H-208ENST00000557652 ANLNQ9NQW6 1124 aa14.55□□□□□ -0.08
SUPT16H-208ENST00000557652 KCND1Q9NSA2 647 aa14.55□□□□□ -0.08
SUPT16H-208ENST00000557652 PCSK1NQ9UHG2 260 aa14.55□□□□□ -0.08
SUPT16H-208ENST00000557652 XPO7Q9UIA9 1087 aaKnown RBP14.55□□□□□ -0.08
SUPT16H-208ENST00000557652 VANGL2Q9ULK5 521 aa14.55□□□□□ -0.08
SUPT16H-208ENST00000557652 TBC1D30Q9Y2I9 924 aa14.55□□□□□ -0.08
SUPT16H-208ENST00000557652 ZDBF2Q9HCK1 2354 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 KANSL1LA0AUZ9 987 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 MACROD2A1Z1Q3 448 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 OTOL1A6NHN0 477 aaPredicted RBP14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 H3BRJ5 948 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 TNFRSF10AO00220 468 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 TBL1XO60907 577 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 TULP3O75386 442 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 MOCS3O95396 460 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 APODP05090 189 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 RARAP10276 462 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 COMTP21964 271 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 IL1R2P27930 398 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 OPRD1P41143 372 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 SSR1P43307 286 aaKnown RBP14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 TNFRSF4P43489 277 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 DGKGP49619 791 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 TPI1P60174 286 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 GRSF1Q12849 480 aaKnown RBP eCLIP14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 ZNF177Q13360 481 aaPredicted RBP14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 LRRC32Q14392 662 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 HSF5Q4G112 596 aaPredicted RBP14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 ODF2Q5BJF6 829 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 TMEM196Q5HYL7 178 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 C6orf118Q5T5N4 469 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 GRAMD4Q6IC98 578 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 TRIM67Q6ZTA4 783 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 TPRG1Q6ZUI0 275 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 MFN1Q8IWA4 741 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 LZTR1Q8N653 840 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 ST13P5Q8NFI4 369 aaPredicted RBP14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 FAM3CQ92520 227 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 PEBP4Q96S96 227 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 ZNF670Q9BS34 389 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 DHX35Q9H5Z1 703 aaKnown RBP14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 TMEM248Q9NWD8 314 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 KIAA1522Q9P206 1035 aaPredicted RBP14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 SALL4Q9UJQ4 1053 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 AMFRQ9UKV5 643 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 GUCA1BQ9UMX6 200 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 DUSP10Q9Y6W6 482 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 ATG2BQ96BY7 2078 aa14.54□□□□□ -0.08
SUPT16H-208ENST00000557652 GOLGA6L7A0A1B0GV03 622 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 ILVBLA1L0T0 632 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 TMEM110-MUSTN1A8MSY1 372 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 H0Y626 953 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 EEF2KO00418 725 aaKnown RBP14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 SCAMP3O14828 347 aaKnown RBP14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 BUB1O43683 1085 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 CTNNA2P26232 953 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 CTNNA1P35221 906 aaKnown RBP14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 CETN2P41208 172 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 PLK1P53350 603 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 VCPP55072 806 aaKnown RBP14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 COPS2P61201 443 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 RPS24P62847 133 aaKnown RBP14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 SULT2A1Q06520 285 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 RAB6CQ53S08 254 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 PEX26Q7Z412 305 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 BMP8AQ7Z5Y6 402 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 ANKS1BQ7Z6G8 1248 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 KIAA0907Q7Z7F0 614 aaPredicted RBP14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 KATNAL2Q8IYT4 538 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 AHI1Q8N157 1196 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 CCAR2Q8N163 923 aaKnown RBP14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 UBL4BQ8N7F7 174 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 TERB1Q8NA31 727 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 UCMAQ8WVF2 138 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 RBM41Q96IZ5 413 aaKnown RBP14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 RAB6CQ9H0N0 254 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 DNAJC17Q9NVM6 304 aaKnown RBP14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 STARD13Q9Y3M8 1113 aa14.53□□□□□ -0.08
SUPT16H-208ENST00000557652 GRID2IPA4D2P6 1211 aa14.52□□□□□ -0.09
SUPT16H-208ENST00000557652 TSPAN3O60637 253 aa14.52□□□□□ -0.09
SUPT16H-208ENST00000557652 SRGAP2O75044 1071 aa14.52□□□□□ -0.09
SUPT16H-208ENST00000557652 ASLP04424 464 aa14.52□□□□□ -0.09
SUPT16H-208ENST00000557652 CISD3P0C7P0 127 aa14.52□□□□□ -0.09
SUPT16H-208ENST00000557652 EPHB2P29323 1055 aa14.52□□□□□ -0.09
SUPT16H-208ENST00000557652 HOXD11P31277 338 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms