RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 EIF3IQ13347 325 aaKnown RBP9.83□□□□□ -0.84
NEDD1-211ENST00000557454 AAMPQ13685 434 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 SPIDRQ14159 915 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 STAT4Q14765 748 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 ZNF174Q15697 407 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 SV2AQ7L0J3 742 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 DPH6Q7L8W6 267 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 PRPF39Q86UA1 669 aaKnown RBP9.83□□□□□ -0.84
NEDD1-211ENST00000557454 HEATR4Q86WZ0 1026 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 DTX1Q86Y01 620 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 MMAAQ8IVH4 418 aaKnown RBP9.83□□□□□ -0.84
NEDD1-211ENST00000557454 AADATQ8N5Z0 425 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 JPH3Q8WXH2 748 aaPredicted RBP9.83□□□□□ -0.84
NEDD1-211ENST00000557454 KCNB2Q92953 911 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 KLHDC7BQ96G42 594 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 ZNF274Q96GC6 653 aaPredicted RBP9.83□□□□□ -0.84
NEDD1-211ENST00000557454 ABHD17AQ96GS6 310 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 MYOCQ99972 504 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 MTMR12Q9C0I1 747 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 IKZF4Q9H2S9 585 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 CASS4Q9NQ75 786 aa9.83□□□□□ -0.84
NEDD1-211ENST00000557454 LARSQ9P2J5 1176 aaKnown RBP9.83□□□□□ -0.84
NEDD1-211ENST00000557454 TPX2Q9ULW0 747 aaKnown RBP9.83□□□□□ -0.84
NEDD1-211ENST00000557454 SDK2Q58EX2 2172 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 UBE4BO95155 1302 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 MED13LQ71F56 2210 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 TBC1D3DA0A087WVF3 549 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 TBC1D3IA0A087WXS9 549 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 TBC1D3EA0A087X179 549 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 TBC1D3KA0A087X1G2 549 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 EME2A4GXA9 379 aaPredicted RBP9.82□□□□□ -0.84
NEDD1-211ENST00000557454 TBC1D3FA6NER0 549 aaPredicted RBP9.82□□□□□ -0.84
NEDD1-211ENST00000557454 NEMP2A6NFY4 417 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 TBC1D3LB9A6J9 549 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 AGRPO00253 132 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 MUSKO15146 869 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 RNASEH1O60930 286 aaKnown RBP9.82□□□□□ -0.84
NEDD1-211ENST00000557454 TBC1D3HP0C7X1 549 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 JMJD7P0C870 316 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 NR1D1P20393 614 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 CORO1AP31146 461 aaKnown RBP9.82□□□□□ -0.84
NEDD1-211ENST00000557454 CHKAP35790 457 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 PLA2G4AP47712 749 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 PSMD8P48556 350 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 ZNF542PQ5EBM4 170 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 TBC1D3GQ6DHY5 549 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 TBC1D3CQ6IPX1 549 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 ZCCHC8Q6NZY4 707 aaKnown RBP9.82□□□□□ -0.84
NEDD1-211ENST00000557454 SND1Q7KZF4 910 aaKnown RBP eCLIP9.82□□□□□ -0.84
NEDD1-211ENST00000557454 ADIPOR2Q86V24 386 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 TBC1D3Q8IZP1 549 aaPredicted RBP9.82□□□□□ -0.84
NEDD1-211ENST00000557454 ZSWIM2Q8NEG5 633 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 WFIKKN2Q8TEU8 576 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 DDI1Q8WTU0 396 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 PDCD6IPQ8WUM4 868 aaKnown RBP9.82□□□□□ -0.84
NEDD1-211ENST00000557454 CACTINQ8WUQ7 758 aaKnown RBP9.82□□□□□ -0.84
NEDD1-211ENST00000557454 NANOS1Q8WY41 292 aaKnown RBP9.82□□□□□ -0.84
NEDD1-211ENST00000557454 SLC2A11Q9BYW1 496 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 FOXP3Q9BZS1 431 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 SLC24A3Q9HC58 644 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 PREBQ9HCU5 417 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 DMAP1Q9NPF5 467 aaPredicted RBP9.82□□□□□ -0.84
NEDD1-211ENST00000557454 TLR8Q9NR97 1041 aaKnown RBP9.82□□□□□ -0.84
NEDD1-211ENST00000557454 ABCB8Q9NUT2 735 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 SUN2Q9UH99 717 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 CYTH4Q9UIA0 394 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 RP1P56715 2156 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 ESPL1Q14674 2120 aa9.82□□□□□ -0.84
NEDD1-211ENST00000557454 HMBSP08397 361 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 DLDP09622 509 aaKnown RBP9.81□□□□□ -0.84
NEDD1-211ENST00000557454 GOT1P17174 413 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 ITIH1P19827 911 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 HOXD9P28356 352 aaPredicted RBP9.81□□□□□ -0.84
NEDD1-211ENST00000557454 SLC8A1P32418 973 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 GNL1P36915 607 aaPredicted RBP9.81□□□□□ -0.84
NEDD1-211ENST00000557454 POU5F1Q01860 360 aaKnown RBP9.81□□□□□ -0.84
NEDD1-211ENST00000557454 NAA30Q147X3 362 aaPredicted RBP9.81□□□□□ -0.84
NEDD1-211ENST00000557454 NR0B2Q15466 257 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 ZRSR1Q15695 479 aaKnown RBP9.81□□□□□ -0.84
NEDD1-211ENST00000557454 C10orf120Q5SQS8 335 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 MBLAC2Q68D91 279 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 FAM35AQ86V20 835 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 BRSK2Q8IWQ3 736 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 B3GALNT2Q8NCR0 500 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 MARVELD3Q96A59 401 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 HPDLQ96IR7 371 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 FAM213AQ9BRX8 229 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 CALN1Q9BXU9 219 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 SNX25Q9H3E2 840 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 NMUR1Q9HB89 426 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 GGA2Q9UJY4 613 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 AGO1Q9UL18 857 aaKnown RBP9.81□□□□□ -0.84
NEDD1-211ENST00000557454 DMTF1Q9Y222 760 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 TP53TG5Q9Y2B4 290 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 ZNF510Q9Y2H8 683 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 LOXL2Q9Y4K0 774 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 STYXL1Q9Y6J8 313 aa9.81□□□□□ -0.84
NEDD1-211ENST00000557454 SVILO95425 2214 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 SLC12A8A0AV02 714 aa9.8□□□□□ -0.84
NEDD1-211ENST00000557454 PRAMEF26H0Y7S4 382 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms