RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 APAF1O14727 1248 aa4.74□□□□□ -1.65
VRK1-207ENST00000557352 MDM4O15151 490 aa4.74□□□□□ -1.65
VRK1-207ENST00000557352 PMM2O15305 246 aa4.74□□□□□ -1.65
VRK1-207ENST00000557352 FGF18O76093 207 aa4.74□□□□□ -1.65
VRK1-207ENST00000557352 NFATC1O95644 943 aa4.74□□□□□ -1.65
VRK1-207ENST00000557352 TTC39AQ5SRH9 613 aa4.74□□□□□ -1.65
VRK1-207ENST00000557352 HMBOX1Q6NT76 420 aa4.74□□□□□ -1.65
VRK1-207ENST00000557352 PDXDC1Q6P996 788 aa4.74□□□□□ -1.65
VRK1-207ENST00000557352 FBXO38Q6PIJ6 1188 aa4.74□□□□□ -1.65
VRK1-207ENST00000557352 ADGRF3Q8IZF5 1079 aa4.74□□□□□ -1.65
VRK1-207ENST00000557352 IQCF1Q8N6M8 205 aa4.74□□□□□ -1.65
VRK1-207ENST00000557352 KAT2AQ92830 837 aa4.74□□□□□ -1.65
VRK1-207ENST00000557352 MCRS1Q96EZ8 462 aa4.74□□□□□ -1.65
VRK1-207ENST00000557352 IL21RQ9HBE5 538 aa4.74□□□□□ -1.65
VRK1-207ENST00000557352 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.74□□□□□ -1.65
VRK1-207ENST00000557352 SELENONQ9NZV5 590 aa4.74□□□□□ -1.65
VRK1-207ENST00000557352 LOC105369274A0A096LPK9 316 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 LOC102723532A0A0G2JNH3 316 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 RPS10-NUDT3A0A1W2PQS6 291 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 EME2A4GXA9 379 aaPredicted RBP4.73□□□□□ -1.65
VRK1-207ENST00000557352 FOXO6A8MYZ6 492 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 M0QYT0 321 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 PODXLO00592 558 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 NKX2-8O15522 239 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 NTSR2O95665 410 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 TNFSF4P23510 183 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 EEF1GP26641 437 aaKnown RBP4.73□□□□□ -1.65
VRK1-207ENST00000557352 SHC2P98077 582 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 AAK1Q2M2I8 961 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 CYB5R4Q7L1T6 521 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 DPP9Q86TI2 863 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 GPSM1Q86YR5 675 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 DCP1BQ8IZD4 617 aaKnown RBP4.73□□□□□ -1.65
VRK1-207ENST00000557352 OR4N4Q8N0Y3 316 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 ADPRHL1Q8NDY3 354 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 NEUROG1Q92886 237 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 ZNF566Q969W8 418 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 MEIS3Q99687 375 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 SF3B5Q9BWJ5 86 aaKnown RBP4.73□□□□□ -1.65
VRK1-207ENST00000557352 EPS8L2Q9H6S3 715 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 SFXN1Q9H9B4 322 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 MAP6D1Q9H9H5 199 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 NECTIN3Q9NQS3 549 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 SIRT3Q9NTG7 399 aaPredicted RBP4.73□□□□□ -1.65
VRK1-207ENST00000557352 LMTK3Q96Q04 1460 aa4.73□□□□□ -1.65
VRK1-207ENST00000557352 PCDH17O14917 1159 aa4.72□□□□□ -1.65
VRK1-207ENST00000557352 CER1O95813 267 aa4.72□□□□□ -1.65
VRK1-207ENST00000557352 TRIM27P14373 513 aa4.72□□□□□ -1.65
VRK1-207ENST00000557352 IGFBP2P18065 325 aa4.72□□□□□ -1.65
VRK1-207ENST00000557352 MLH1P40692 756 aa4.72□□□□□ -1.65
VRK1-207ENST00000557352 RFX2P48378 723 aa4.72□□□□□ -1.65
VRK1-207ENST00000557352 GRM4Q14833 912 aa4.72□□□□□ -1.65
VRK1-207ENST00000557352 ASIC2Q16515 512 aa4.72□□□□□ -1.65
VRK1-207ENST00000557352 WASHC2DQ5SRD0 308 aa4.72□□□□□ -1.65
VRK1-207ENST00000557352 ANKRD40Q6AI12 368 aa4.72□□□□□ -1.65
VRK1-207ENST00000557352 ZNF324BQ6AW86 544 aaPredicted RBP4.72□□□□□ -1.65
VRK1-207ENST00000557352 PARM1Q6UWI2 310 aa4.72□□□□□ -1.65
VRK1-207ENST00000557352 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.72□□□□□ -1.65
VRK1-207ENST00000557352 ISCUQ9H1K1 167 aa4.72□□□□□ -1.65
VRK1-207ENST00000557352 METTL14Q9HCE5 456 aaKnown RBP4.72□□□□□ -1.65
VRK1-207ENST00000557352 ZNF112Q9UJU3 913 aa4.72□□□□□ -1.65
VRK1-207ENST00000557352 INSL5Q9Y5Q6 135 aa4.72□□□□□ -1.65
VRK1-207ENST00000557352 GLP2RO95838 553 aa4.71□□□□□ -1.66
VRK1-207ENST00000557352 ANXA6P08133 673 aa4.71□□□□□ -1.66
VRK1-207ENST00000557352 MYL3P08590 195 aa4.71□□□□□ -1.66
VRK1-207ENST00000557352 ALDOCP09972 364 aaKnown RBP4.71□□□□□ -1.66
VRK1-207ENST00000557352 PEPDP12955 493 aa4.71□□□□□ -1.66
VRK1-207ENST00000557352 LTBQ06643 244 aa4.71□□□□□ -1.66
VRK1-207ENST00000557352 RAB30Q15771 203 aa4.71□□□□□ -1.66
VRK1-207ENST00000557352 ARL6IP4Q66PJ3 421 aaKnown RBP4.71□□□□□ -1.66
VRK1-207ENST00000557352 SPATA2LQ8IUW3 424 aaPredicted RBP4.71□□□□□ -1.66
VRK1-207ENST00000557352 ATP2A3Q93084 1043 aa4.71□□□□□ -1.66
VRK1-207ENST00000557352 OSBPL5Q9H0X9 879 aaPredicted RBP4.71□□□□□ -1.66
VRK1-207ENST00000557352 TXNRD2Q9NNW7 524 aa4.71□□□□□ -1.66
VRK1-207ENST00000557352 CXorf65A6NEN9 183 aa4.7□□□□□ -1.66
VRK1-207ENST00000557352 GAGE12JA6NER3 117 aa4.7□□□□□ -1.66
VRK1-207ENST00000557352 HNRNPDLO14979 420 aaKnown RBP4.7□□□□□ -1.66
VRK1-207ENST00000557352 NEURL1O76050 574 aa4.7□□□□□ -1.66
VRK1-207ENST00000557352 KLKB1P03952 638 aa4.7□□□□□ -1.66
VRK1-207ENST00000557352 ALDOAP04075 364 aaKnown RBP4.7□□□□□ -1.66
VRK1-207ENST00000557352 TM4SF4P48230 202 aa4.7□□□□□ -1.66
VRK1-207ENST00000557352 FOXL2P58012 376 aa4.7□□□□□ -1.66
VRK1-207ENST00000557352 TAS2R50P59544 299 aa4.7□□□□□ -1.66
VRK1-207ENST00000557352 RPL15P61313 204 aaKnown RBP4.7□□□□□ -1.66
VRK1-207ENST00000557352 TLE3Q04726 772 aa4.7□□□□□ -1.66
VRK1-207ENST00000557352 SLC4A8Q2Y0W8 1093 aa4.7□□□□□ -1.66
VRK1-207ENST00000557352 DGKKQ5KSL6 1271 aa4.7□□□□□ -1.66
VRK1-207ENST00000557352 Q5PR19 223 aa4.7□□□□□ -1.66
VRK1-207ENST00000557352 C10orf76Q5T2E6 689 aa4.7□□□□□ -1.66
VRK1-207ENST00000557352 TRILQ7L0X0 811 aa4.7□□□□□ -1.66
VRK1-207ENST00000557352 KDELC2Q7Z4H8 507 aa4.7□□□□□ -1.66
VRK1-207ENST00000557352 CTU1Q7Z7A3 348 aaKnown RBP4.7□□□□□ -1.66
VRK1-207ENST00000557352 TRABD2AQ86V40 505 aa4.7□□□□□ -1.66
VRK1-207ENST00000557352 C7orf57Q8NEG2 295 aa4.7□□□□□ -1.66
VRK1-207ENST00000557352 PJA1Q8NG27 643 aa4.7□□□□□ -1.66
VRK1-207ENST00000557352 NUDCD2Q8WVJ2 157 aa4.7□□□□□ -1.66
VRK1-207ENST00000557352 URB1-AS1Q96HZ7 61 aa4.7□□□□□ -1.66
VRK1-207ENST00000557352 FAM84BQ96KN1 310 aaPredicted RBP4.7□□□□□ -1.66
VRK1-207ENST00000557352 RIPOR3Q96MK2 946 aa4.7□□□□□ -1.66
VRK1-207ENST00000557352 TM7SF3Q9NS93 570 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms