RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 TMEM40Q8WWA1 233 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 SNF8Q96H20 258 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 LRGUKQ96M69 825 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 GBA2Q9HCG7 927 aaPredicted RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 NGRNQ9NPE2 291 aaKnown RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 VPS45Q9NRW7 570 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 SETD4Q9NVD3 440 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 RRN3Q9NYV6 651 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 SENP1Q9P0U3 644 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 LNPEPQ9UIQ6 1025 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 DNPEPQ9ULA0 475 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 NOVA2Q9UNW9 492 aaKnown RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 SPEF1Q9Y4P9 236 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 LAMA3Q16787 3333 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 SCN10AQ9Y5Y9 1956 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 SIGLEC16A6NMB1 481 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 RAD51BO15315 384 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 HNRNPRO43390 633 aaKnown RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 LIASO43766 372 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 ZBTB14O43829 449 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 MICAL2O94851 1124 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 PFKMP08237 780 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 PTPN7P35236 360 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 SERPINB6P35237 376 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 GABRB2P47870 512 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 ITGA8P53708 1063 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 SEC24CP53992 1094 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 EIF3BP55884 814 aaKnown RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 ADAM17P78536 824 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 TNFAIP2Q03169 654 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 TMEM132DQ14C87 1099 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 RAB6CQ53S08 254 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 PRAMEF19Q5SWL8 479 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 CST9Q5W186 159 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 ARHGAP11AQ6P4F7 1023 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 RUFY4Q6ZNE9 571 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 DPP9Q86TI2 863 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 CLVS1Q8IUQ0 354 aaPredicted RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 FNIP1Q8TF40 1166 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 PGM2Q96G03 612 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 TMEM176AQ96HP8 235 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 MIS12Q9H081 205 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 RAB6CQ9H0N0 254 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 BRD9Q9H8M2 597 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 CRLF2Q9HC73 371 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 IL20Q9NYY1 176 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 AFF4Q9UHB7 1163 aaKnown RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 CLEC11AQ9Y240 323 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 TSC2P49815 1807 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 MBLAC1A4D2B0 266 aaPredicted RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 SGK1O00141 431 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 NVLO15381 856 aaKnown RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 NCAM2O15394 837 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 STAU1O95793 577 aaKnown RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 IGHA2P01877 340 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 FYNP06241 537 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 CD48P09326 243 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 ALOX5P09917 674 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 CD19P15391 556 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 ITIH2P19823 946 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 PCK1P35558 622 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 GRM5P41594 1212 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 FKBP1BP68106 108 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 GSTM4Q03013 218 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 CACNB2Q08289 660 aaPredicted RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 PIGHQ14442 188 aaPredicted RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 ZBTB6Q15916 424 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 TAZQ16635 292 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 PTGISQ16647 500 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 DGKDQ16760 1214 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 SMTNL2Q2TAL5 461 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 KCNT1Q5JUK3 1230 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 MORN1Q5T089 497 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 OLFML2BQ68BL8 750 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 DENND2CQ68D51 928 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 DRICH1Q6PGQ1 229 aaPredicted RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 DCUN1D2Q6PH85 259 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 SPOCD1Q6ZMY3 1216 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 SYDE1Q6ZW31 735 aaPredicted RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 POLNQ7Z5Q5 900 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 PLEKHH3Q7Z736 793 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 ZNF410Q86VK4 478 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 GALNT13Q8IUC8 556 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 CCDC33Q8N5R6 958 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 OR6J1Q8NGC5 347 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 CFAP61Q8NHU2 1237 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 MCRS1Q96EZ8 462 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 HPDLQ96IR7 371 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 RADILQ96JH8 1075 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 TMEM109Q9BVC6 243 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 CALN1Q9BXU9 219 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 METTL5Q9NRN9 209 aaKnown RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 PCMTD2Q9NV79 361 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 ASIC3Q9UHC3 531 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 ANGPTL2Q9UKU9 493 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 VANGL2Q9ULK5 521 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 SOX13Q9UN79 622 aa5.23□□□□□ -1.57
TMEM260-210ENST00000556422 MTF2Q9Y483 593 aaPredicted RBP5.23□□□□□ -1.57
TMEM260-210ENST00000556422 HES2Q9Y543 173 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms