RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 TMCO5BA8MYB1 307 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 K7ESF4 209 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 PAGE1O75459 146 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 MOCS2O96007 188 aaPredicted RBP9.99□□□□□ -0.81
SRP54-210ENST00000556380 APOEP02649 317 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 CYBBP04839 570 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 FAM228BP0C875 321 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 SP9P0CG40 484 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 HOXA6P31267 233 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 HOXC13P31276 330 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 SULT1E1P49888 294 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 MMP16P51512 607 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 RPL7AP62424 266 aaKnown RBP9.99□□□□□ -0.81
SRP54-210ENST00000556380 RPS24P62847 133 aaKnown RBP9.99□□□□□ -0.81
SRP54-210ENST00000556380 MRPS21P82921 87 aaKnown RBP9.99□□□□□ -0.81
SRP54-210ENST00000556380 SATB1Q01826 763 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 OGDHQ02218 1023 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 DEUP1Q05D60 604 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 KDSRQ06136 332 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 MTA1Q13330 715 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 C15orf59Q2T9L4 293 aaPredicted RBP9.99□□□□□ -0.81
SRP54-210ENST00000556380 BRMS1LQ5PSV4 323 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 RAP1GAP2Q684P5 730 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 GRAMD4Q6IC98 578 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 DNAJC24Q6P3W2 148 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 C14orf80Q86SX3 495 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.99□□□□□ -0.81
SRP54-210ENST00000556380 ATP6V0D2Q8N8Y2 350 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 DDI1Q8WTU0 396 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 MRFAP1L1Q96HT8 127 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 DDX50Q9BQ39 737 aaKnown RBP9.99□□□□□ -0.81
SRP54-210ENST00000556380 TRIM5Q9C035 493 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 POLR3BQ9NW08 1133 aaPredicted RBP9.99□□□□□ -0.81
SRP54-210ENST00000556380 COX16Q9P0S2 106 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 SLC12A6Q9UHW9 1150 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 FBXO4Q9UKT5 387 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 HS3ST4Q9Y661 456 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 MIA3Q5JRA6 1907 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 TMEM191CA6NGB0 347 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 DRGXA6NNA5 263 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 H0Y858 1186 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 LAMTOR5O43504 91 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 TBL1XO60907 577 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 MFAP3LO75121 409 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 ABCB4P21439 1286 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 TACR2P21452 398 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 GPD1P21695 349 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 HLA-FP30511 346 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 SDC4P31431 198 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 RDXP35241 583 aaKnown RBP9.98□□□□□ -0.81
SRP54-210ENST00000556380 EIF4A3P38919 411 aaKnown RBP9.98□□□□□ -0.81
SRP54-210ENST00000556380 CXCL12P48061 93 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 DGKGP49619 791 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 CCR3P51677 355 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 ZNF143P52747 638 aaPredicted RBP9.98□□□□□ -0.81
SRP54-210ENST00000556380 ADKP55263 362 aaKnown RBP9.98□□□□□ -0.81
SRP54-210ENST00000556380 HDAC4P56524 1084 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 AUHQ13825 339 aaKnown RBP9.98□□□□□ -0.81
SRP54-210ENST00000556380 GEN1Q17RS7 908 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 ZNF528Q3MIS6 628 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 PREPLQ4J6C6 727 aaPredicted RBP9.98□□□□□ -0.81
SRP54-210ENST00000556380 C2orf27AQ580R0 203 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 TDRD12Q587J7 1177 aaKnown RBP9.98□□□□□ -0.81
SRP54-210ENST00000556380 TMEM215Q68D42 235 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 FBXL22Q6P050 247 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 SYT13Q7L8C5 426 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 STRADAQ7RTN6 431 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 TMC6Q7Z403 805 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 LGI2Q8N0V4 545 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 CFAP52Q8N1V2 620 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 TC2NQ8N9U0 490 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 IL17RCQ8NAC3 791 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 HJURPQ8NCD3 748 aaPredicted RBP9.98□□□□□ -0.81
SRP54-210ENST00000556380 RPLP0P6Q8NHW5 317 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 CCDC26Q8TAB7 109 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 FIBINQ8TAL6 211 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 WFDC5Q8TCV5 224 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 RNF34Q969K3 372 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 IGSF8Q969P0 613 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 C1orf74Q96LT6 269 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 HAPLN3Q96S86 360 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 CHP1Q99653 195 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 SELENOOQ9BVL4 669 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 TKTL2Q9H0I9 626 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 WDCPQ9H6R7 721 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 TMPRSS4Q9NRS4 437 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 ABHD10Q9NUJ1 306 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 PARVAQ9NVD7 372 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 MYO18AQ92614 2054 aaKnown RBP9.98□□□□□ -0.81
SRP54-210ENST00000556380 ATG2BQ96BY7 2078 aa9.98□□□□□ -0.81
SRP54-210ENST00000556380 GVINP1Q7Z2Y8 2422 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 FRYLO94915 3013 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 IGLV3-10A0A075B6K4 115 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 SSU72P8A0A1W2PR75 194 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 AKR1B15C9JRZ8 316 aaPredicted RBP9.97□□□□□ -0.81
SRP54-210ENST00000556380 ADAM23O75077 832 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 ATG13O75143 517 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 MYBL1P10243 752 aa9.97□□□□□ -0.81
SRP54-210ENST00000556380 HNRNPLP14866 589 aaKnown RBP eCLIP9.97□□□□□ -0.81
SRP54-210ENST00000556380 ADRA1BP35368 520 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms