RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 GPR18Q14330 331 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 TTC39AQ5SRH9 613 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 FNBP1LQ5T0N5 605 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 FAM90A2PQ658T7 463 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 APOA5Q6Q788 366 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 OVCH2Q7RTZ1 564 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 LAS2Q8IYD9 372 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 TTC8Q8TAM2 541 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 NODALQ96S42 347 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 DDX31Q9H8H2 851 aaKnown RBP3.77□□□□□ -1.81
SCFD1-218ENST00000556256 TCF7L2Q9NQB0 619 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 FZD10Q9ULW2 581 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 PLSCR5A0PG75 271 aa3.76□□□□□ -1.81
SCFD1-218ENST00000556256 CAPN8A6NHC0 703 aa3.76□□□□□ -1.81
SCFD1-218ENST00000556256 FOXO6A8MYZ6 492 aa3.76□□□□□ -1.81
SCFD1-218ENST00000556256 U2AF1L5P0DN76 240 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-218ENST00000556256 DRD1P21728 446 aa3.76□□□□□ -1.81
SCFD1-218ENST00000556256 U2AF1Q01081 240 aaKnown RBP eCLIP3.76□□□□□ -1.81
SCFD1-218ENST00000556256 RBM39Q14498 530 aaKnown RBP3.76□□□□□ -1.81
SCFD1-218ENST00000556256 ZRSR1Q15695 479 aaKnown RBP3.76□□□□□ -1.81
SCFD1-218ENST00000556256 HSP90AB2PQ58FF8 381 aa3.76□□□□□ -1.81
SCFD1-218ENST00000556256 CREB3L2Q70SY1 520 aa3.76□□□□□ -1.81
SCFD1-218ENST00000556256 H1FNTQ75WM6 255 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-218ENST00000556256 C14orf80Q86SX3 495 aa3.76□□□□□ -1.81
SCFD1-218ENST00000556256 CADM3Q8N126 398 aa3.76□□□□□ -1.81
SCFD1-218ENST00000556256 OR52L2PQ8NGH6 319 aa3.76□□□□□ -1.81
SCFD1-218ENST00000556256 GABPB2Q8TAK5 448 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-218ENST00000556256 RUNDC1Q96C34 613 aa3.76□□□□□ -1.81
SCFD1-218ENST00000556256 RTP4Q96DX8 246 aa3.76□□□□□ -1.81
SCFD1-218ENST00000556256 MAGEH1Q9H213 219 aa3.76□□□□□ -1.81
SCFD1-218ENST00000556256 SLC25A32Q9H2D1 315 aa3.76□□□□□ -1.81
SCFD1-218ENST00000556256 SDF2L1Q9HCN8 221 aa3.76□□□□□ -1.81
SCFD1-218ENST00000556256 GEMIN8Q9NWZ8 242 aaKnown RBP3.76□□□□□ -1.81
SCFD1-218ENST00000556256 TPCN1Q9ULQ1 816 aa3.76□□□□□ -1.81
SCFD1-218ENST00000556256 NOB1Q9ULX3 412 aaKnown RBP3.76□□□□□ -1.81
SCFD1-218ENST00000556256 LOC102724159A0A0B4J2E5 919 aa3.75□□□□□ -1.81
SCFD1-218ENST00000556256 CFAP69A5D8W1 941 aa3.75□□□□□ -1.81
SCFD1-218ENST00000556256 IL18RAPO95256 599 aa3.75□□□□□ -1.81
SCFD1-218ENST00000556256 ZNF12P17014 697 aa3.75□□□□□ -1.81
SCFD1-218ENST00000556256 MMP8P22894 467 aa3.75□□□□□ -1.81
SCFD1-218ENST00000556256 PWP2Q15269 919 aaKnown RBP3.75□□□□□ -1.81
SCFD1-218ENST00000556256 DNTTIP2Q5QJE6 756 aaKnown RBP3.75□□□□□ -1.81
SCFD1-218ENST00000556256 OTUD1Q5VV17 481 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-218ENST00000556256 CLIP4Q8N3C7 705 aa3.75□□□□□ -1.81
SCFD1-218ENST00000556256 SPEM1Q8N4L4 309 aa3.75□□□□□ -1.81
SCFD1-218ENST00000556256 GPR78Q96P69 363 aa3.75□□□□□ -1.81
SCFD1-218ENST00000556256 WDR24Q96S15 920 aa3.75□□□□□ -1.81
SCFD1-218ENST00000556256 ZNF347Q96SE7 839 aa3.75□□□□□ -1.81
SCFD1-218ENST00000556256 KRTAP4-3Q9BYR4 195 aa3.75□□□□□ -1.81
SCFD1-218ENST00000556256 AS3MTQ9HBK9 375 aa3.75□□□□□ -1.81
SCFD1-218ENST00000556256 RXFP3Q9NSD7 469 aa3.75□□□□□ -1.81
SCFD1-218ENST00000556256 I6L893 689 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-218ENST00000556256 FRS3O43559 492 aa3.74□□□□□ -1.81
SCFD1-218ENST00000556256 CARSP49589 748 aaKnown RBP3.74□□□□□ -1.81
SCFD1-218ENST00000556256 TBX4P57082 545 aa3.74□□□□□ -1.81
SCFD1-218ENST00000556256 SEMA3BQ13214 749 aa3.74□□□□□ -1.81
SCFD1-218ENST00000556256 MINDY4Q4G0A6 757 aa3.74□□□□□ -1.81
SCFD1-218ENST00000556256 TMEM196Q5HYL7 178 aa3.74□□□□□ -1.81
SCFD1-218ENST00000556256 LCE3CQ5T5A8 94 aa3.74□□□□□ -1.81
SCFD1-218ENST00000556256 CYB5RLQ6IPT4 315 aa3.74□□□□□ -1.81
SCFD1-218ENST00000556256 ACSM6Q6P461 480 aa3.74□□□□□ -1.81
SCFD1-218ENST00000556256 KDELC2Q7Z4H8 507 aa3.74□□□□□ -1.81
SCFD1-218ENST00000556256 WDR75Q8IWA0 830 aaKnown RBP3.74□□□□□ -1.81
SCFD1-218ENST00000556256 KIAA0319LQ8IZA0 1049 aa3.74□□□□□ -1.81
SCFD1-218ENST00000556256 ENGASEQ8NFI3 743 aa3.74□□□□□ -1.81
SCFD1-218ENST00000556256 OR52N4Q8NGI2 321 aa3.74□□□□□ -1.81
SCFD1-218ENST00000556256 IPCEF1Q8WWN9 437 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-218ENST00000556256 KAT2AQ92830 837 aa3.74□□□□□ -1.81
SCFD1-218ENST00000556256 DUX5Q96PT3 197 aa3.74□□□□□ -1.81
SCFD1-218ENST00000556256 TMEM60Q9H2L4 133 aa3.74□□□□□ -1.81
SCFD1-218ENST00000556256 IL21RQ9HBE5 538 aa3.74□□□□□ -1.81
SCFD1-218ENST00000556256 SLC8A2Q9UPR5 921 aa3.74□□□□□ -1.81
SCFD1-218ENST00000556256 B3GNT3Q9Y2A9 372 aa3.74□□□□□ -1.81
SCFD1-218ENST00000556256 GOLGA6CA6NDK9 693 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 GOLGA6BA6NDN3 693 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 KIF3BO15066 747 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 NFATC1O95644 943 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 SNRNP70P08621 437 aaKnown RBP3.73□□□□□ -1.81
SCFD1-218ENST00000556256 GOLGA6DP0CG33 693 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 ATF3P18847 181 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 GNALP38405 381 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 SELENOVP59797 346 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 GBX1Q14549 363 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 CNN3Q15417 329 aaKnown RBP3.73□□□□□ -1.81
SCFD1-218ENST00000556256 KIF19Q2TAC6 998 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 GFOD2Q3B7J2 385 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 DCAF12L2Q5VW00 463 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 DSTYKQ6XUX3 929 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 CYB5R4Q7L1T6 521 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 RFLNBQ8N5W9 214 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 ABHD5Q8WTS1 349 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 GLMPQ8WWB7 406 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 PKP4Q99569 1192 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 OBP2AQ9NY56 170 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 GOLGA6AQ9NYA3 693 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 L1RE1Q9UN81 338 aa3.73□□□□□ -1.81
SCFD1-218ENST00000556256 VSTM5A8MXK1 200 aa3.72□□□□□ -1.81
SCFD1-218ENST00000556256 BUB3O43684 328 aa3.72□□□□□ -1.81
SCFD1-218ENST00000556256 F7P08709 466 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-218ENST00000556256 ALADP13716 330 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms