RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 DUSP4Q13115 394 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 RASA2Q15283 850 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 PSMD5Q16401 504 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 TAOK1Q7L7X3 1001 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 ANKMY2Q8IV38 441 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 TDHQ8IZJ6 230 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 CCDC33Q8N5R6 958 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 FBXO36Q8NEA4 188 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 HDAC11Q96DB2 347 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 LRRC39Q96DD0 335 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 SEPT5Q99719 369 aaPredicted RBP15.14■□□□□ 0.01
VPS33B-205ENST00000556096 WDR83Q9BRX9 315 aaKnown RBP15.14■□□□□ 0.01
VPS33B-205ENST00000556096 VN1R3Q9BXE9 311 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 VPS37BQ9H9H4 285 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 EURLQ9NYK6 297 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 NEU3Q9UQ49 428 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 TEX264Q9Y6I9 313 aa15.14■□□□□ 0.01
VPS33B-205ENST00000556096 WDR27A2RRH5 827 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 RNF103O00237 685 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 FGF10O15520 208 aaPredicted RBP15.13■□□□□ 0.01
VPS33B-205ENST00000556096 MSI1O43347 362 aaKnown RBP15.13■□□□□ 0.01
VPS33B-205ENST00000556096 BANF1O75531 89 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 SOAT2O75908 522 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 SOD2P04179 222 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 APRTP07741 180 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 ZDHHC11BP0C7U3 371 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 MYOGP15173 224 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 ATP2A2P16615 1042 aaKnown RBP15.13■□□□□ 0.01
VPS33B-205ENST00000556096 BMP8BP34820 402 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 MMP13P45452 471 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 TUFMP49411 452 aaKnown RBP15.13■□□□□ 0.01
VPS33B-205ENST00000556096 DMTNQ08495 405 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 WASHC5Q12768 1159 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 PARP6Q2NL67 630 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 GLIPR1L2Q4G1C9 344 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 HP1BP3Q5SSJ5 553 aaPredicted RBP15.13■□□□□ 0.01
VPS33B-205ENST00000556096 ARTNQ5T4W7 220 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 FAXCQ5TGI0 409 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 RASIP1Q5U651 963 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 ZNF771Q7L3S4 317 aaPredicted RBP15.13■□□□□ 0.01
VPS33B-205ENST00000556096 PALM2Q8IXS6 379 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 LZTR1Q8N653 840 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 NPWQ8N729 165 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 COLGALT1Q8NBJ5 622 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 STKLD1Q8NE28 680 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 TBC1D31Q96DN5 1066 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 FCRL2Q96LA5 508 aaPredicted RBP15.13■□□□□ 0.01
VPS33B-205ENST00000556096 ZNF558Q96NG5 402 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 TTLL2Q9BWV7 592 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 CATSPERBQ9H7T0 1116 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 EIF2B3Q9NR50 452 aaKnown RBP15.13■□□□□ 0.01
VPS33B-205ENST00000556096 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.13■□□□□ 0.01
VPS33B-205ENST00000556096 IGSF9Q9P2J2 1179 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 HSFX1Q9UBD0 423 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 SLC24A2Q9UI40 661 aa15.13■□□□□ 0.01
VPS33B-205ENST00000556096 ZNF638Q14966 1978 aaKnown RBP15.13■□□□□ 0.01
VPS33B-205ENST00000556096 EXOC1LA0A1B0GW35 172 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 SRRM3A6NNA2 597 aaPredicted RBP15.12■□□□□ 0.01
VPS33B-205ENST00000556096 ADAM12O43184 909 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 SPAG6O75602 509 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 ELK3P41970 407 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 MAGEA3P43357 314 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 MLLT6P55198 1093 aaPredicted RBP15.12■□□□□ 0.01
VPS33B-205ENST00000556096 TBX4P57082 545 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 SARNPP82979 210 aaKnown RBP15.12■□□□□ 0.01
VPS33B-205ENST00000556096 TAF10Q12962 218 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 KIAA1841Q6NSI8 718 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 C3orf62Q6ZUJ4 267 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 EXOC3L1Q86VI1 746 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 CAND1Q86VP6 1230 aaKnown RBP15.12■□□□□ 0.01
VPS33B-205ENST00000556096 TP53INP2Q8IXH6 220 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 CMTR2Q8IYT2 770 aaKnown RBP15.12■□□□□ 0.01
VPS33B-205ENST00000556096 SLC39A11Q8N1S5 342 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 ZNF276Q8N554 614 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 GPR152Q8TDT2 470 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 SIK2Q9H0K1 926 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 XAB2Q9HCS7 855 aaKnown RBP15.12■□□□□ 0.01
VPS33B-205ENST00000556096 RABGEF1Q9UJ41 708 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 NUDT5Q9UKK9 219 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 SLC38A8A6NNN8 435 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 SRGAP2BP0DMP2 458 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 MLNP12872 115 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 GCAP28676 217 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 OR1D2P34982 312 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 PBX2P40425 430 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 GARSP41250 739 aaKnown RBP15.12■□□□□ 0.01
VPS33B-205ENST00000556096 COG7P83436 770 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 DSG1Q02413 1049 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 TRIP4Q15650 581 aaPredicted RBP15.12■□□□□ 0.01
VPS33B-205ENST00000556096 SPOUT1Q5T280 376 aaKnown RBP15.12■□□□□ 0.01
VPS33B-205ENST00000556096 ACBD5Q5T8D3 534 aaPredicted RBP15.12■□□□□ 0.01
VPS33B-205ENST00000556096 ZNF567Q8N184 647 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 ARHGEF2Q92974 986 aaKnown RBP15.12■□□□□ 0.01
VPS33B-205ENST00000556096 CENPTQ96BT3 561 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 VAT1Q99536 393 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 ZBED2Q9BTP6 218 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 HERC2P3Q9BVR0 1158 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 MTIF3Q9H2K0 278 aaKnown RBP15.12■□□□□ 0.01
VPS33B-205ENST00000556096 FNIP2Q9P278 1114 aa15.12■□□□□ 0.01
VPS33B-205ENST00000556096 AFF4Q9UHB7 1163 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms