RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 SLC6A14Q9UN76 642 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 SLC27A6Q9Y2P4 619 aa6.98□□□□□ -1.29
PSEN1-216ENST00000556066 HBS1LQ9Y450 684 aaKnown RBP6.98□□□□□ -1.29
PSEN1-216ENST00000556066 PCDH15Q96QU1 1955 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.97□□□□□ -1.29
PSEN1-216ENST00000556066 BICDL2A1A5D9 508 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 MEI4A8MW99 385 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 GOLGA6L22H0YM25 854 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 RNF225M0QZC1 329 aaPredicted RBP6.97□□□□□ -1.29
PSEN1-216ENST00000556066 LAMA5O15230 3695 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 GADD45BO75293 160 aaPredicted RBP6.97□□□□□ -1.29
PSEN1-216ENST00000556066 EPHX1P07099 455 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 PROS1P07225 676 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 SERPINF2P08697 491 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 PAEPP09466 180 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 ACADMP11310 421 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 KRT5P13647 590 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 CEACAM1P13688 526 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 HLA-EP13747 358 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 SPINK2P20155 84 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 BMP6P22004 513 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 LORP23490 312 aaPredicted RBP6.97□□□□□ -1.29
PSEN1-216ENST00000556066 PRKCHP24723 683 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 MAOBP27338 520 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 HOXD9P28356 352 aaPredicted RBP6.97□□□□□ -1.29
PSEN1-216ENST00000556066 CD6P30203 668 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 HOXD12P35452 270 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 DAOAP59103 153 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 EIF4HQ15056 248 aaKnown RBP6.97□□□□□ -1.29
PSEN1-216ENST00000556066 E2F5Q15329 346 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 TRIP4Q15650 581 aaPredicted RBP6.97□□□□□ -1.29
PSEN1-216ENST00000556066 CNGA2Q16280 664 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 PLEKHG6Q3KR16 790 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 FNDC3BQ53EP0 1204 aaKnown RBP6.97□□□□□ -1.29
PSEN1-216ENST00000556066 MPPE1Q53F39 396 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 SYCP2LQ5T4T6 812 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 ADGRF1Q5T601 910 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 TTI2Q6NXR4 508 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 PMF1Q6P1K2 205 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 SLC23A3Q6PIS1 610 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 LCLAT1Q6UWP7 414 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 FAM124AQ86V42 546 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 TMPRSS6Q8IU80 811 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 ARHGEF19Q8IW93 802 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 UBR7Q8N806 425 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 RBBP8NLQ8NC74 664 aaPredicted RBP6.97□□□□□ -1.29
PSEN1-216ENST00000556066 OR2I1PQ8NGU4 316 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 CEP76Q8TAP6 659 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 CYB5D2Q8WUJ1 264 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 SLC35F5Q8WV83 523 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 KCTD13Q8WZ19 329 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 PRCCQ92733 491 aaPredicted RBP6.97□□□□□ -1.29
PSEN1-216ENST00000556066 TMA16Q96EY4 203 aaKnown RBP6.97□□□□□ -1.29
PSEN1-216ENST00000556066 SIPA1Q96FS4 1042 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 TOE1Q96GM8 510 aaKnown RBP6.97□□□□□ -1.29
PSEN1-216ENST00000556066 PIWIL1Q96J94 861 aaKnown RBP6.97□□□□□ -1.29
PSEN1-216ENST00000556066 GPR174Q9BXC1 333 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 SLC2A11Q9BYW1 496 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 MKRN2Q9H000 416 aaKnown RBP6.97□□□□□ -1.29
PSEN1-216ENST00000556066 MIS12Q9H081 205 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 MIR1-1HGQ9H1L0 117 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 SLC32A1Q9H598 525 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 CNGB3Q9NQW8 809 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 ST7Q9NRC1 585 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 ABCB8Q9NUT2 735 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 STIM2Q9P246 746 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 THAP10Q9P2Z0 257 aaPredicted RBP6.97□□□□□ -1.29
PSEN1-216ENST00000556066 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.97□□□□□ -1.29
PSEN1-216ENST00000556066 DOLKQ9UPQ8 538 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 CFAP46Q8IYW2 2715 aa6.97□□□□□ -1.29
PSEN1-216ENST00000556066 TP53BP1Q12888 1972 aaPredicted RBP6.97□□□□□ -1.29
PSEN1-216ENST00000556066 NAV2Q8IVL1 2488 aa6.96□□□□□ -1.29
PSEN1-216ENST00000556066 TMEM131Q92545 1883 aa6.96□□□□□ -1.29
PSEN1-216ENST00000556066 CABIN1Q9Y6J0 2220 aa6.96□□□□□ -1.29
PSEN1-216ENST00000556066 GOLGA6L7A0A1B0GV03 622 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 ERVH48-1M5A8F1 160 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 NPC1O15118 1278 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 P4HA2O15460 535 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 TIMM44O43615 452 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 OPHN1O60890 802 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 TBL1XO60907 577 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 GNA14O95837 355 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 TOP3BO95985 862 aaKnown RBP6.96□□□□□ -1.3
PSEN1-216ENST00000556066 AFPP02771 609 aaKnown RBP6.96□□□□□ -1.3
PSEN1-216ENST00000556066 LTFP02788 710 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 SYPP08247 313 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 NCAM1P13591 858 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 GNSP15586 552 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 CSRP1P21291 193 aaKnown RBP6.96□□□□□ -1.3
PSEN1-216ENST00000556066 HLA-FP30511 346 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 SLC11A2P49281 568 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 TPMTP51580 245 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 SGSHP51688 502 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 TBX4P57082 545 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 ZNF445P59923 1031 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 KCNMA1Q12791 1236 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 PAK1Q13153 545 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 MORC3Q14149 939 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 STILQ15468 1287 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 WDR45BQ5MNZ6 344 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms