RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 GPD1P21695 349 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 RFC1P35251 1148 aaPredicted RBP7.1□□□□□ -1.27
SLIRP-204ENST00000555890 BMPR1AP36894 532 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 MLH1P40692 756 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 ACADSBP45954 432 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 LHX1P48742 406 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 FNTAP49354 379 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 BCAT1P54687 386 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 RPL7AP62424 266 aaKnown RBP7.1□□□□□ -1.27
SLIRP-204ENST00000555890 MRPS25P82663 173 aaKnown RBP7.1□□□□□ -1.27
SLIRP-204ENST00000555890 SOX4Q06945 474 aaPredicted RBP7.1□□□□□ -1.27
SLIRP-204ENST00000555890 BST2Q10589 180 aaKnown RBP7.1□□□□□ -1.27
SLIRP-204ENST00000555890 CAMK2GQ13555 558 aaPredicted RBP7.1□□□□□ -1.27
SLIRP-204ENST00000555890 HLTFQ14527 1009 aaKnown RBP eCLIP7.1□□□□□ -1.27
SLIRP-204ENST00000555890 SMC1AQ14683 1233 aaKnown RBP7.1□□□□□ -1.27
SLIRP-204ENST00000555890 LPIN1Q14693 890 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 CYP1B1Q16678 543 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 HSP90B2PQ58FF3 399 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 DSTYKQ6XUX3 929 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 AGMOQ6ZNB7 445 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 SYDE1Q6ZW31 735 aaPredicted RBP7.1□□□□□ -1.27
SLIRP-204ENST00000555890 LIMS2Q7Z4I7 341 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 ADAT2Q7Z6V5 191 aaKnown RBP7.1□□□□□ -1.27
SLIRP-204ENST00000555890 XYLT1Q86Y38 959 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 CPNE8Q86YQ8 564 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 SLITRK4Q8IW52 837 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 MAML2Q8IZL2 1156 aaPredicted RBP7.1□□□□□ -1.27
SLIRP-204ENST00000555890 EFHBQ8N7U6 833 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 PRELID2Q8N945 189 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 C12orf50Q8NA57 414 aaPredicted RBP7.1□□□□□ -1.27
SLIRP-204ENST00000555890 ANKRD52Q8NB46 1076 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 RNF169Q8NCN4 708 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 VN1R2Q8NFZ6 395 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 GRK7Q8WTQ7 553 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 CASKIN2Q8WXE0 1202 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 CAVIN3Q969G5 261 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 UROC1Q96N76 676 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 CPXM1Q96SM3 734 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 ADAM2Q99965 735 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 TRIM7Q9C029 511 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 ZCCHC2Q9C0B9 1178 aaKnown RBP7.1□□□□□ -1.27
SLIRP-204ENST00000555890 LMAN2LQ9H0V9 348 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 LRRC19Q9H756 370 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 RSAD1Q9HA92 442 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 RC3H2Q9HBD1 1191 aaKnown RBP7.1□□□□□ -1.27
SLIRP-204ENST00000555890 FAM49BQ9NUQ9 324 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 ASNSD1Q9NWL6 643 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 FAM53CQ9NYF3 392 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 PCYOX1Q9UHG3 505 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 AMACRQ9UHK6 382 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 CYTH4Q9UIA0 394 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 NFU1Q9UMS0 254 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 MTORP42345 2549 aa7.1□□□□□ -1.27
SLIRP-204ENST00000555890 B8ZZF3 427 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 F8VP50 259 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 TERTO14746 1132 aaKnown RBP7.09□□□□□ -1.27
SLIRP-204ENST00000555890 PPP1R12AO14974 1030 aaPredicted RBP7.09□□□□□ -1.27
SLIRP-204ENST00000555890 TTI1O43156 1089 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 DNAJC6O75061 913 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 TJP3O95049 919 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 GJB6O95452 261 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 EOMESO95936 686 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 F11P03951 625 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 RB1P06400 928 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 CELA3AP09093 270 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 RARAP10276 462 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 RHOQP17081 205 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 PTPN1P18031 435 aaKnown RBP7.09□□□□□ -1.27
SLIRP-204ENST00000555890 TARSP26639 723 aaKnown RBP7.09□□□□□ -1.27
SLIRP-204ENST00000555890 ADORA2BP29275 332 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 GJC1P36383 396 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 COILP38432 576 aaPredicted RBP7.09□□□□□ -1.27
SLIRP-204ENST00000555890 CARSP49589 748 aaKnown RBP7.09□□□□□ -1.27
SLIRP-204ENST00000555890 ZNF143P52747 638 aaPredicted RBP7.09□□□□□ -1.27
SLIRP-204ENST00000555890 DRG2P55039 364 aaKnown RBP7.09□□□□□ -1.27
SLIRP-204ENST00000555890 TAS2R40P59535 323 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 RPS26P62854 115 aaKnown RBP7.09□□□□□ -1.27
SLIRP-204ENST00000555890 SLC6A3Q01959 620 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 GRIK3Q13003 919 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 LY6DQ14210 128 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 FAM102AQ5T9C2 384 aaPredicted RBP7.09□□□□□ -1.27
SLIRP-204ENST00000555890 STPG1Q5TH74 334 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 ALS2CLQ60I27 953 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 AADACL2Q6P093 401 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 CCDC137Q6PK04 289 aaKnown RBP7.09□□□□□ -1.27
SLIRP-204ENST00000555890 POLNQ7Z5Q5 900 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 TMEM110Q86TL2 294 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 METTL23Q86XA0 190 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 JAMLQ86YT9 394 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 C12orf29Q8N999 325 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 JOSD2Q8TAC2 188 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 SLC35F5Q8WV83 523 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 KBTBD7Q8WVZ9 684 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 HPS1Q92902 700 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 LPPQ93052 612 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 LRRC45Q96CN5 670 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 SHDQ96IW2 340 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 SENP8Q96LD8 212 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 ZFP42Q96MM3 310 aa7.09□□□□□ -1.27
SLIRP-204ENST00000555890 ERP44Q9BS26 406 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms