RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 GJB6O95452 261 aa21.19■□□□□ 0.98
VTI1B-205ENST00000555543 DLDP09622 509 aaKnown RBP21.19■□□□□ 0.98
VTI1B-205ENST00000555543 CSRP2Q16527 193 aa21.19■□□□□ 0.98
VTI1B-205ENST00000555543 SLC25A52Q3SY17 297 aa21.19■□□□□ 0.98
VTI1B-205ENST00000555543 FILIP1LQ4L180 1135 aa21.19■□□□□ 0.98
VTI1B-205ENST00000555543 FNDC3BQ53EP0 1204 aaKnown RBP21.19■□□□□ 0.98
VTI1B-205ENST00000555543 BNIPLQ7Z465 357 aa21.19■□□□□ 0.98
VTI1B-205ENST00000555543 C11orf74Q86VG3 221 aa21.19■□□□□ 0.98
VTI1B-205ENST00000555543 ZNF557Q8N988 423 aaPredicted RBP21.19■□□□□ 0.98
VTI1B-205ENST00000555543 IGSF8Q969P0 613 aa21.19■□□□□ 0.98
VTI1B-205ENST00000555543 CFAP57Q96MR6 1250 aa21.19■□□□□ 0.98
VTI1B-205ENST00000555543 TMEM245Q9H330 911 aa21.19■□□□□ 0.98
VTI1B-205ENST00000555543 TMPRSS4Q9NRS4 437 aa21.19■□□□□ 0.98
VTI1B-205ENST00000555543 ARHGEF38Q9NXL2 777 aa21.19■□□□□ 0.98
VTI1B-205ENST00000555543 THADAQ6YHU6 1953 aa21.19■□□□□ 0.98
VTI1B-205ENST00000555543 RALGAPA1Q6GYQ0 2036 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 H0Y626 953 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 EPHX1P07099 455 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 POLR2EP19388 210 aaKnown RBP21.18■□□□□ 0.98
VTI1B-205ENST00000555543 MPLP40238 635 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 CSKP41240 450 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 NSFP46459 744 aaKnown RBP21.18■□□□□ 0.98
VTI1B-205ENST00000555543 COPAP53621 1224 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 DEUP1Q05D60 604 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 AUHQ13825 339 aaKnown RBP21.18■□□□□ 0.98
VTI1B-205ENST00000555543 RAB6CQ53S08 254 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 PLA2G2CQ5R387 149 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 E4F1Q66K89 784 aaPredicted RBP21.18■□□□□ 0.98
VTI1B-205ENST00000555543 KIAA1324Q6UXG2 1013 aaKnown RBP21.18■□□□□ 0.98
VTI1B-205ENST00000555543 PRR23CQ6ZRP0 262 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 IRF2BP2Q7Z5L9 587 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 C14orf80Q86SX3 495 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 CCAR2Q8N163 923 aaKnown RBP21.18■□□□□ 0.98
VTI1B-205ENST00000555543 JOSD2Q8TAC2 188 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 TTC17Q96AE7 1141 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 RMDN1Q96DB5 314 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 AGPAT1Q99943 283 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 SYT11Q9BT88 431 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 TKTL2Q9H0I9 626 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 RAB6CQ9H0N0 254 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 SEPT11Q9NVA2 429 aaKnown RBP21.18■□□□□ 0.98
VTI1B-205ENST00000555543 VANGL2Q9ULK5 521 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 CYP8B1Q9UNU6 501 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 PCDHGA5Q9Y5G8 931 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 SNX10Q9Y5X0 201 aa21.18■□□□□ 0.98
VTI1B-205ENST00000555543 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 IGHV1OR15-9A0A0B4J2B8 117 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 A0A1W2PQC6 194 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 LRRC53A6NM62 1247 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 ZBTB24O43167 697 aaPredicted RBP21.17■□□□□ 0.98
VTI1B-205ENST00000555543 SYNCRIPO60506 623 aaKnown RBP21.17■□□□□ 0.98
VTI1B-205ENST00000555543 SERPINC1P01008 464 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 FERP16591 822 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 NUMBP49757 651 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 CREB5Q02930 508 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 NR1I3Q14994 352 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 E2F5Q15329 346 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 SF3A2Q15428 464 aaKnown RBP21.17■□□□□ 0.98
VTI1B-205ENST00000555543 PITRM1Q5JRX3 1037 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 BRMS1LQ5PSV4 323 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 RABGAP1LQ5R372 815 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 ARCQ7LC44 396 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 CACUL1Q86Y37 369 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 PHF13Q86YI8 300 aaPredicted RBP21.17■□□□□ 0.98
VTI1B-205ENST00000555543 TMEFF1Q8IYR6 380 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 MYO19Q96H55 970 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 RPRD1AQ96P16 312 aaPredicted RBP21.17■□□□□ 0.98
VTI1B-205ENST00000555543 TTYH3Q9C0H2 523 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 SIK2Q9H0K1 926 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 WDCPQ9H6R7 721 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 MYO6Q9UM54 1294 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 PLA2G4CQ9UP65 541 aa21.17■□□□□ 0.98
VTI1B-205ENST00000555543 A0A1B0GVM2 712 aa21.16■□□□□ 0.98
VTI1B-205ENST00000555543 BCLAF3A2AJT9 711 aaKnown RBP21.16■□□□□ 0.98
VTI1B-205ENST00000555543 TCAF2A6NFQ2 919 aa21.16■□□□□ 0.98
VTI1B-205ENST00000555543 MAP3K13O43283 966 aa21.16■□□□□ 0.98
VTI1B-205ENST00000555543 F9P00740 461 aa21.16■□□□□ 0.98
VTI1B-205ENST00000555543 ATP5BP06576 529 aaKnown RBP21.16■□□□□ 0.98
VTI1B-205ENST00000555543 PTGER3P43115 390 aa21.16■□□□□ 0.98
VTI1B-205ENST00000555543 CTSOP43234 321 aaPredicted RBP21.16■□□□□ 0.98
VTI1B-205ENST00000555543 DHPSP49366 369 aaPredicted RBP21.16■□□□□ 0.98
VTI1B-205ENST00000555543 GSCP56915 257 aaPredicted RBP21.16■□□□□ 0.98
VTI1B-205ENST00000555543 FANCCQ00597 558 aa21.16■□□□□ 0.98
VTI1B-205ENST00000555543 LMNB2Q03252 620 aa21.16■□□□□ 0.98
VTI1B-205ENST00000555543 CAMK2GQ13555 558 aaPredicted RBP21.16■□□□□ 0.98
VTI1B-205ENST00000555543 BYSLQ13895 437 aaKnown RBP21.16■□□□□ 0.98
VTI1B-205ENST00000555543 TTC39BQ5VTQ0 682 aaPredicted RBP21.16■□□□□ 0.98
VTI1B-205ENST00000555543 CXorf57Q6NSI4 855 aaKnown RBP21.16■□□□□ 0.98
VTI1B-205ENST00000555543 SND1Q7KZF4 910 aaKnown RBP eCLIP21.16■□□□□ 0.98
VTI1B-205ENST00000555543 MON1BQ7L1V2 547 aa21.16■□□□□ 0.98
VTI1B-205ENST00000555543 ARMCX6Q7L4S7 300 aa21.16■□□□□ 0.98
VTI1B-205ENST00000555543 CCDC117Q8IWD4 279 aaPredicted RBP21.16■□□□□ 0.98
VTI1B-205ENST00000555543 ZNF683Q8IZ20 524 aa21.16■□□□□ 0.98
VTI1B-205ENST00000555543 APCDD1Q8J025 514 aa21.16■□□□□ 0.98
VTI1B-205ENST00000555543 MRGPRX3Q96LB0 322 aa21.16■□□□□ 0.98
VTI1B-205ENST00000555543 MTG2Q9H4K7 406 aa21.16■□□□□ 0.98
VTI1B-205ENST00000555543 PRDM16Q9HAZ2 1276 aa21.16■□□□□ 0.98
VTI1B-205ENST00000555543 ADAM22Q9P0K1 906 aa21.16■□□□□ 0.98
VTI1B-205ENST00000555543 KIAA1522Q9P206 1035 aaPredicted RBP21.16■□□□□ 0.98
VTI1B-205ENST00000555543 TNRC6BQ9UPQ9 1833 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms