RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 TBX20Q9UMR3 447 aa6□□□□□ -1.45
CKS1BP1-201ENST00000555221 INSL6Q9Y581 213 aa6□□□□□ -1.45
CKS1BP1-201ENST00000555221 ENO1P06733 434 aaKnown RBP5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 PROZP22891 400 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 GDF5P43026 501 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 SLC14A1Q13336 389 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 OLFML1Q6UWY5 402 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 KIAA1324Q6UXG2 1013 aaKnown RBP5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 RANBP10Q6VN20 620 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 DBX2Q6ZNG2 339 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 LRRC8DQ7L1W4 858 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 MAATS1Q7Z4T9 603 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 AMIGO2Q86SJ2 522 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 ADGRF3Q8IZF5 1079 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 PCYOX1LQ8NBM8 494 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 STAMQ92783 540 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 SKA1Q96BD8 255 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 GPR78Q96P69 363 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 ABHD14AQ9BUJ0 271 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 HERC2P3Q9BVR0 1158 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 CLPBQ9H078 707 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 NUAK2Q9H093 628 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 KLK15Q9H2R5 256 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 ARL8BQ9NVJ2 186 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 ASB6Q9NWX5 421 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 MTMR4Q9NYA4 1195 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 ADAM21Q9UKJ8 722 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 SPATA31A5Q5VU36 1347 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 SPATA31A6Q5VVP1 1343 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 SPATA31A7Q8IWB4 1347 aa5.99□□□□□ -1.45
CKS1BP1-201ENST00000555221 TMEM232C9JQI7 657 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 PEX12O00623 359 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 CCNT1O60563 726 aaKnown RBP5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 GUCY1B2O75343 617 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 MBD4O95243 580 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 SGPL1O95470 568 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 HNRNPA1P09651 372 aaKnown RBP eCLIP5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 ALDOCP09972 364 aaKnown RBP5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 WEE2P0C1S8 567 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 TGM2P21980 687 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 PGM1P36871 562 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 TUBP50607 506 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 ZNF84P51523 738 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 OAZ1P54368 228 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 ZXDAP98168 799 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 MPP1Q00013 466 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 DPTQ07507 201 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 DMWDQ09019 674 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 FHL2Q14192 279 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 RSRC2Q7L4I2 434 aaKnown RBP5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 TCP11L2Q8N4U5 519 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 KCNJ9Q92806 393 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 CELF1Q92879 486 aaKnown RBP5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 SH3KBP1Q96B97 665 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 MASTLQ96GX5 879 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 ZNF764Q96H86 408 aaPredicted RBP5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 STN1Q9H668 368 aaKnown RBP5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 ERVK-5Q9HDB9 667 aa5.98□□□□□ -1.45
CKS1BP1-201ENST00000555221 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 CNTN5O94779 1100 aa5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 METTL18O95568 372 aa5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 CYP2D6P10635 497 aa5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 PRPH2P23942 346 aa5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 ACVRL1P37023 503 aa5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 RPS6KA3P51812 740 aa5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 SHC2P98077 582 aa5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 B4GALNT1Q00973 533 aa5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 KPNB1Q14974 876 aaKnown RBP5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 FAAH2Q6GMR7 532 aa5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 UEVLDQ8IX04 471 aa5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 ST8SIA4Q92187 359 aa5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 P2RY11Q96G91 374 aa5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 TRIM31Q9BZY9 425 aa5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 TAOK3Q9H2K8 898 aa5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 SLC22A11Q9NSA0 550 aa5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 SEMA4GQ9NTN9 838 aa5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 THAP1Q9NVV9 213 aa5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 CD207Q9UJ71 328 aa5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 SLC25A13Q9UJS0 675 aa5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 ARHGAP26Q9UNA1 814 aa5.97□□□□□ -1.45
CKS1BP1-201ENST00000555221 NPIPB13A6NJU9 1138 aa5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 NPIPB5A8MRT5 1133 aa5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 NPIPB4C9JG80 1138 aa5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 DHX16O60231 1041 aaKnown RBP5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 RNF8O76064 485 aa5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 RFPL3SP0C7P2 107 aa5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 CYP4B1P13584 511 aa5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 HOXB9P17482 250 aaPredicted RBP5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 TNFAIP3P21580 790 aa5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 GEMIN4P57678 1058 aaKnown RBP5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 GPR68Q15743 365 aa5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 BAK1Q16611 211 aa5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 ANXA2RQ3ZCQ2 193 aa5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 GXYLT1Q4G148 440 aa5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 ATP2A3Q93084 1043 aa5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 RITA1Q96K30 269 aa5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 OSBPL5Q9H0X9 879 aaPredicted RBP5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 PREBQ9HCU5 417 aa5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 ARPP21Q9UBL0 812 aaPredicted RBP5.96□□□□□ -1.46
CKS1BP1-201ENST00000555221 KLQ9UEF7 1012 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms