RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 VWA3BQ502W6 1294 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 MPPE1Q53F39 396 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 FAM133BQ5BKY9 247 aaKnown RBP11□□□□□ -0.65
SHMT2-215ENST00000554656 MIIPQ5JXC2 388 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 WDR45BQ5MNZ6 344 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 ADGRF1Q5T601 910 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 NADSYN1Q6IA69 706 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 PMF1Q6P1K2 205 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 RFWD3Q6PCD5 774 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 LCLAT1Q6UWP7 414 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 SERPINA13PQ6UXR4 307 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 FAM124AQ86V42 546 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 CNGA4Q8IV77 575 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 NAXDQ8IW45 347 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 LRRC8AQ8IWT6 810 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 SIX6OS1Q8N1H7 587 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 CADM4Q8NFZ8 388 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 LMO3Q8TAP4 145 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 SLC35F5Q8WV83 523 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 PRCCQ92733 491 aaPredicted RBP11□□□□□ -0.65
SHMT2-215ENST00000554656 LMLNQ96KR4 655 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 PRICKLE1Q96MT3 831 aaPredicted RBP11□□□□□ -0.65
SHMT2-215ENST00000554656 EDEM3Q9BZQ6 932 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 MIR1-1HGQ9H1L0 117 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 NDST4Q9H3R1 872 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 MTG2Q9H4K7 406 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 C6orf106Q9H6K1 298 aaPredicted RBP11□□□□□ -0.65
SHMT2-215ENST00000554656 CNGB3Q9NQW8 809 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 HESX1Q9UBX0 185 aa11□□□□□ -0.65
SHMT2-215ENST00000554656 ARMCX3Q9UH62 379 aaPredicted RBP11□□□□□ -0.65
SHMT2-215ENST00000554656 EIF2B4Q9UI10 523 aaKnown RBP11□□□□□ -0.65
SHMT2-215ENST00000554656 WDR3Q9UNX4 943 aaKnown RBP eCLIP11□□□□□ -0.65
SHMT2-215ENST00000554656 FNDC3AQ9Y2H6 1198 aaKnown RBP11□□□□□ -0.65
SHMT2-215ENST00000554656 GOLGA6L7A0A1B0GV03 622 aa10.99□□□□□ -0.65
SHMT2-215ENST00000554656 FAM221BA6H8Z2 402 aa10.99□□□□□ -0.65
SHMT2-215ENST00000554656 BCAT2O15382 392 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-215ENST00000554656 LATS1O95835 1130 aa10.99□□□□□ -0.65
SHMT2-215ENST00000554656 FYNP06241 537 aa10.99□□□□□ -0.65
SHMT2-215ENST00000554656 PAEPP09466 180 aa10.99□□□□□ -0.65
SHMT2-215ENST00000554656 PABPC1P11940 636 aaKnown RBP10.99□□□□□ -0.65
SHMT2-215ENST00000554656 GNSP15586 552 aa10.99□□□□□ -0.65
SHMT2-215ENST00000554656 TBXAS1P24557 533 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-215ENST00000554656 CD70P32970 193 aa10.99□□□□□ -0.65
SHMT2-215ENST00000554656 ACSL1P33121 698 aa10.99□□□□□ -0.65
SHMT2-215ENST00000554656 HARS2P49590 506 aaKnown RBP10.99□□□□□ -0.65
SHMT2-215ENST00000554656 YWHAEP62258 255 aaKnown RBP10.99□□□□□ -0.65
SHMT2-215ENST00000554656 SLC14A1Q13336 389 aa10.99□□□□□ -0.65
SHMT2-215ENST00000554656 FNDC3BQ53EP0 1204 aaKnown RBP10.99□□□□□ -0.65
SHMT2-215ENST00000554656 PIK3R6Q5UE93 754 aa10.99□□□□□ -0.65
SHMT2-215ENST00000554656 TMEM270Q6UE05 265 aa10.99□□□□□ -0.65
SHMT2-215ENST00000554656 CHST9Q7L1S5 443 aa10.99□□□□□ -0.65
SHMT2-215ENST00000554656 ARHGEF19Q8IW93 802 aa10.99□□□□□ -0.65
SHMT2-215ENST00000554656 OR2T3Q8NH03 318 aa10.99□□□□□ -0.65
SHMT2-215ENST00000554656 WFIKKN2Q8TEU8 576 aa10.99□□□□□ -0.65
SHMT2-215ENST00000554656 RNF139Q8WU17 664 aa10.99□□□□□ -0.65
SHMT2-215ENST00000554656 MYO19Q96H55 970 aa10.99□□□□□ -0.65
SHMT2-215ENST00000554656 KCNF1Q9H3M0 494 aa10.99□□□□□ -0.65
SHMT2-215ENST00000554656 ABCC13Q9NSE7 274 aa10.99□□□□□ -0.65
SHMT2-215ENST00000554656 GGA2Q9UJY4 613 aa10.99□□□□□ -0.65
SHMT2-215ENST00000554656 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.99□□□□□ -0.65
SHMT2-215ENST00000554656 APC2O95996 2303 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 A0A1B0GVT2 93 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 A0A1W2PQJ5 194 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 GTPBP10A4D1E9 387 aaKnown RBP10.98□□□□□ -0.65
SHMT2-215ENST00000554656 AKR1B15C9JRZ8 316 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-215ENST00000554656 M0QYV0 167 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 TAF4O00268 1085 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 PMM2O15305 246 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 TIMM44O43615 452 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 LTFP02788 710 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 FTH1P19P0C7X4 201 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 OXTRP30559 389 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 RPS14P62263 151 aaKnown RBP10.98□□□□□ -0.65
SHMT2-215ENST00000554656 ARID5BQ14865 1188 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 TRIP6Q15654 476 aaKnown RBP10.98□□□□□ -0.65
SHMT2-215ENST00000554656 CNGA2Q16280 664 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 ZNF423Q2M1K9 1284 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 MBLAC2Q68D91 279 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 LAYNQ6UX15 382 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 SLCO6A1Q86UG4 719 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 PPM1KQ8N3J5 372 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 PNPLA1Q8N8W4 532 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 BAHD1Q8TBE0 780 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-215ENST00000554656 TMA16Q96EY4 203 aaKnown RBP10.98□□□□□ -0.65
SHMT2-215ENST00000554656 FCRL2Q96LA5 508 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-215ENST00000554656 KREMEN1Q96MU8 473 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 NT5C1BQ96P26 610 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 PANX2Q96RD6 677 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 ORAI3Q9BRQ5 295 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 NAA15Q9BXJ9 866 aaKnown RBP10.98□□□□□ -0.65
SHMT2-215ENST00000554656 ZDHHC5Q9C0B5 715 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 LHX5Q9H2C1 402 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 GAREM1Q9H706 876 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 PRSS16Q9NQE7 514 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 PCOLCE2Q9UKZ9 415 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 INTS6Q9UL03 887 aaKnown RBP10.98□□□□□ -0.65
SHMT2-215ENST00000554656 KIAA1257Q9ULG3 409 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 DAAM1Q9Y4D1 1078 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 PCDHB4Q9Y5E5 795 aa10.98□□□□□ -0.65
SHMT2-215ENST00000554656 DOCK9Q9BZ29 2069 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms