RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-215ENST00000554567 PAEPP09466 180 aa27.53■■■□□ 2
KTN1-215ENST00000554567 BRD2P25440 801 aaKnown RBP27.53■■■□□ 2
KTN1-215ENST00000554567 CSKP41240 450 aa27.53■■■□□ 2
KTN1-215ENST00000554567 RPS24P62847 133 aaKnown RBP27.53■■■□□ 2
KTN1-215ENST00000554567 ZNF557Q8N988 423 aaPredicted RBP27.53■■■□□ 2
KTN1-215ENST00000554567 ENGASEQ8NFI3 743 aa27.53■■■□□ 2
KTN1-215ENST00000554567 MYEOVQ96EZ4 313 aa27.53■■■□□ 2
KTN1-215ENST00000554567 MYO19Q96H55 970 aa27.53■■■□□ 2
KTN1-215ENST00000554567 PRICKLE1Q96MT3 831 aaPredicted RBP27.53■■■□□ 2
KTN1-215ENST00000554567 DDX50Q9BQ39 737 aaKnown RBP27.53■■■□□ 2
KTN1-215ENST00000554567 ZSWIM1Q9BR11 485 aa27.53■■■□□ 2
KTN1-215ENST00000554567 ORAI3Q9BRQ5 295 aa27.53■■■□□ 2
KTN1-215ENST00000554567 SERGEFQ9UGK8 458 aa27.53■■■□□ 2
KTN1-215ENST00000554567 ATP6V1DQ9Y5K8 247 aa27.53■■■□□ 2
KTN1-215ENST00000554567 GOLGA4Q13439 2230 aaKnown RBP27.53■■■□□ 2
KTN1-215ENST00000554567 CELSR3Q9NYQ7 3312 aa27.52■■■□□ 2
KTN1-215ENST00000554567 ACACAQ13085 2346 aa27.52■■■□□ 2
KTN1-215ENST00000554567 A0A1W2PP55 124 aa27.52■■■□□ 2
KTN1-215ENST00000554567 TYW5A2RUC4 315 aaKnown RBP27.52■■■□□ 2
KTN1-215ENST00000554567 MID1O15344 667 aa27.52■■■□□ 2
KTN1-215ENST00000554567 GALCP54803 685 aa27.52■■■□□ 2
KTN1-215ENST00000554567 CNGA2Q16280 664 aa27.52■■■□□ 2
KTN1-215ENST00000554567 SOWAHCQ53LP3 525 aaPredicted RBP27.52■■■□□ 2
KTN1-215ENST00000554567 DHRS13Q6UX07 377 aa27.52■■■□□ 2
KTN1-215ENST00000554567 MMS22LQ6ZRQ5 1243 aa27.52■■■□□ 2
KTN1-215ENST00000554567 USP30Q70CQ3 517 aa27.52■■■□□ 2
KTN1-215ENST00000554567 CCDC117Q8IWD4 279 aaPredicted RBP27.52■■■□□ 2
KTN1-215ENST00000554567 CFAP52Q8N1V2 620 aa27.52■■■□□ 2
KTN1-215ENST00000554567 PPM1KQ8N3J5 372 aa27.52■■■□□ 2
KTN1-215ENST00000554567 ERCC4Q92889 916 aaPredicted RBP27.52■■■□□ 2
KTN1-215ENST00000554567 KAT5Q92993 513 aa27.52■■■□□ 2
KTN1-215ENST00000554567 TTC17Q96AE7 1141 aa27.52■■■□□ 2
KTN1-215ENST00000554567 LRIG1Q96JA1 1093 aa27.52■■■□□ 2
KTN1-215ENST00000554567 LMLNQ96KR4 655 aa27.52■■■□□ 2
KTN1-215ENST00000554567 SLC6A18Q96N87 628 aa27.52■■■□□ 2
KTN1-215ENST00000554567 NT5C1BQ96P26 610 aa27.52■■■□□ 2
KTN1-215ENST00000554567 IRX2Q9BZI1 471 aaPredicted RBP27.52■■■□□ 2
KTN1-215ENST00000554567 NEUROG2Q9H2A3 272 aa27.52■■■□□ 2
KTN1-215ENST00000554567 FTSJ1Q9UET6 329 aa27.52■■■□□ 2
KTN1-215ENST00000554567 INTS6Q9UL03 887 aaKnown RBP27.52■■■□□ 2
KTN1-215ENST00000554567 SCML1Q9UN30 329 aa27.52■■■□□ 2
KTN1-215ENST00000554567 FMO5P49326 533 aa27.51■■□□□ 1.99
KTN1-215ENST00000554567 RACK1P63244 317 aaKnown RBP27.51■■□□□ 1.99
KTN1-215ENST00000554567 CDH18Q13634 790 aa27.51■■□□□ 1.99
KTN1-215ENST00000554567 HNRNPA1L2Q32P51 320 aaKnown RBP27.51■■□□□ 1.99
KTN1-215ENST00000554567 NCEH1Q6PIU2 408 aa27.51■■□□□ 1.99
KTN1-215ENST00000554567 GATAD2AQ86YP4 633 aa27.51■■□□□ 1.99
KTN1-215ENST00000554567 MMAAQ8IVH4 418 aaKnown RBP27.51■■□□□ 1.99
KTN1-215ENST00000554567 AZIN2Q96A70 460 aa27.51■■□□□ 1.99
KTN1-215ENST00000554567 OMDQ99983 421 aa27.51■■□□□ 1.99
KTN1-215ENST00000554567 APC2O95996 2303 aa27.51■■□□□ 1.99
KTN1-215ENST00000554567 A0A1W2PPC4 97 aa27.5■■□□□ 1.99
KTN1-215ENST00000554567 RNASEH2AO75792 299 aaKnown RBP27.5■■□□□ 1.99
KTN1-215ENST00000554567 MOCS2O96007 188 aaPredicted RBP27.5■■□□□ 1.99
KTN1-215ENST00000554567 ASLP04424 464 aa27.5■■□□□ 1.99
KTN1-215ENST00000554567 CTSOP43234 321 aaPredicted RBP27.5■■□□□ 1.99
KTN1-215ENST00000554567 CST6Q15828 149 aa27.5■■□□□ 1.99
KTN1-215ENST00000554567 INAVAQ3KP66 663 aa27.5■■□□□ 1.99
KTN1-215ENST00000554567 FSCBQ5H9T9 825 aa27.5■■□□□ 1.99
KTN1-215ENST00000554567 ADAM32Q8TC27 787 aa27.5■■□□□ 1.99
KTN1-215ENST00000554567 FCRL2Q96LA5 508 aaPredicted RBP27.5■■□□□ 1.99
KTN1-215ENST00000554567 MRGPRX3Q96LB0 322 aa27.5■■□□□ 1.99
KTN1-215ENST00000554567 GSDMAQ96QA5 445 aa27.5■■□□□ 1.99
KTN1-215ENST00000554567 NUCKS1Q9H1E3 243 aaKnown RBP27.5■■□□□ 1.99
KTN1-215ENST00000554567 AASDHPPTQ9NRN7 309 aa27.5■■□□□ 1.99
KTN1-215ENST00000554567 ERVW-1Q9UQF0 538 aa27.5■■□□□ 1.99
KTN1-215ENST00000554567 CEP83Q9Y592 693 aa27.5■■□□□ 1.99
KTN1-215ENST00000554567 TTC34A8MYJ7 566 aa27.49■■□□□ 1.99
KTN1-215ENST00000554567 VILLO15195 856 aa27.49■■□□□ 1.99
KTN1-215ENST00000554567 DFNA5O60443 496 aa27.49■■□□□ 1.99
KTN1-215ENST00000554567 FBXO21O94952 628 aa27.49■■□□□ 1.99
KTN1-215ENST00000554567 SFSWAPQ12872 951 aaKnown RBP27.49■■□□□ 1.99
KTN1-215ENST00000554567 COBLL1Q53SF7 1204 aa27.49■■□□□ 1.99
KTN1-215ENST00000554567 C9orf64Q5T6V5 341 aa27.49■■□□□ 1.99
KTN1-215ENST00000554567 SCUBE3Q8IX30 993 aa27.49■■□□□ 1.99
KTN1-215ENST00000554567 DQX1Q8TE96 717 aaKnown RBP27.49■■□□□ 1.99
KTN1-215ENST00000554567 FAM149B1Q96BN6 582 aa27.49■■□□□ 1.99
KTN1-215ENST00000554567 HSFY1Q96LI6 401 aa27.49■■□□□ 1.99
KTN1-215ENST00000554567 EBF2Q9HAK2 575 aa27.49■■□□□ 1.99
KTN1-215ENST00000554567 DKK4Q9UBT3 224 aa27.49■■□□□ 1.99
KTN1-215ENST00000554567 NAALADL1Q9UQQ1 740 aa27.49■■□□□ 1.99
KTN1-215ENST00000554567 PLXNA2O75051 1894 aa27.49■■□□□ 1.99
KTN1-215ENST00000554567 LOC400499M0QZD8 3231 aa27.48■■□□□ 1.99
KTN1-215ENST00000554567 A0A1B0GTQ1 180 aa27.48■■□□□ 1.99
KTN1-215ENST00000554567 LRRC72A6NJI9 287 aa27.48■■□□□ 1.99
KTN1-215ENST00000554567 FYNP06241 537 aa27.48■■□□□ 1.99
KTN1-215ENST00000554567 SLC8A1P32418 973 aa27.48■■□□□ 1.99
KTN1-215ENST00000554567 LRRC63Q05C16 580 aa27.48■■□□□ 1.99
KTN1-215ENST00000554567 CAMK2BQ13554 666 aa27.48■■□□□ 1.99
KTN1-215ENST00000554567 STILQ15468 1287 aa27.48■■□□□ 1.99
KTN1-215ENST00000554567 SMAD1Q15797 465 aaKnown RBP27.48■■□□□ 1.99
KTN1-215ENST00000554567 MS4A13Q5J8X5 152 aa27.48■■□□□ 1.99
KTN1-215ENST00000554567 PITRM1Q5JRX3 1037 aa27.48■■□□□ 1.99
KTN1-215ENST00000554567 RRAGAQ7L523 313 aa27.48■■□□□ 1.99
KTN1-215ENST00000554567 FMR1NBQ8N0W7 255 aaPredicted RBP27.48■■□□□ 1.99
KTN1-215ENST00000554567 SKA1Q96BD8 255 aa27.48■■□□□ 1.99
KTN1-215ENST00000554567 SERPINB11Q96P15 392 aa27.48■■□□□ 1.99
KTN1-215ENST00000554567 METTL14Q9HCE5 456 aaKnown RBP27.48■■□□□ 1.99
KTN1-215ENST00000554567 ST7Q9NRC1 585 aa27.48■■□□□ 1.99
KTN1-215ENST00000554567 TLR6Q9Y2C9 796 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms