RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 NUCKS1Q9H1E3 243 aaKnown RBP19.44■□□□□ 0.7
CPSF2-203ENST00000554290 RSPH9Q9H1X1 276 aaPredicted RBP19.44■□□□□ 0.7
CPSF2-203ENST00000554290 THAP9Q9H5L6 903 aa19.44■□□□□ 0.7
CPSF2-203ENST00000554290 SGK2Q9HBY8 427 aa19.44■□□□□ 0.7
CPSF2-203ENST00000554290 OSGEPQ9NPF4 335 aa19.44■□□□□ 0.7
CPSF2-203ENST00000554290 TM7SF3Q9NS93 570 aa19.44■□□□□ 0.7
CPSF2-203ENST00000554290 KLK13Q9UKR3 277 aa19.44■□□□□ 0.7
CPSF2-203ENST00000554290 PCNX2A6NKB5 2137 aa19.43■□□□□ 0.7
CPSF2-203ENST00000554290 A0A1B0GVT2 93 aa19.43■□□□□ 0.7
CPSF2-203ENST00000554290 E5RJQ4 531 aa19.43■□□□□ 0.7
CPSF2-203ENST00000554290 PAPSS1O43252 624 aaPredicted RBP19.43■□□□□ 0.7
CPSF2-203ENST00000554290 USP8P40818 1118 aa19.43■□□□□ 0.7
CPSF2-203ENST00000554290 CSNK1EP49674 416 aaKnown RBP19.43■□□□□ 0.7
CPSF2-203ENST00000554290 HNRNPA1L2Q32P51 320 aaKnown RBP19.43■□□□□ 0.7
CPSF2-203ENST00000554290 DCAF6Q58WW2 860 aa19.43■□□□□ 0.7
CPSF2-203ENST00000554290 USP30Q70CQ3 517 aa19.43■□□□□ 0.7
CPSF2-203ENST00000554290 RAB44Q7Z6P3 723 aaPredicted RBP19.43■□□□□ 0.7
CPSF2-203ENST00000554290 LGI2Q8N0V4 545 aa19.43■□□□□ 0.7
CPSF2-203ENST00000554290 CFAP52Q8N1V2 620 aa19.43■□□□□ 0.7
CPSF2-203ENST00000554290 GANCQ8TET4 914 aa19.43■□□□□ 0.7
CPSF2-203ENST00000554290 SETD7Q8WTS6 366 aaKnown RBP19.43■□□□□ 0.7
CPSF2-203ENST00000554290 BTN2A3PQ96KV6 586 aa19.43■□□□□ 0.7
CPSF2-203ENST00000554290 KIAA1522Q9P206 1035 aaPredicted RBP19.43■□□□□ 0.7
CPSF2-203ENST00000554290 TJP2Q9UDY2 1190 aa19.43■□□□□ 0.7
CPSF2-203ENST00000554290 SLC12A6Q9UHW9 1150 aa19.43■□□□□ 0.7
CPSF2-203ENST00000554290 RWDD2AQ9UIY3 292 aa19.43■□□□□ 0.7
CPSF2-203ENST00000554290 INTS6Q9UL03 887 aaKnown RBP19.43■□□□□ 0.7
CPSF2-203ENST00000554290 APOBEC2Q9Y235 224 aaKnown RBP19.43■□□□□ 0.7
CPSF2-203ENST00000554290 FAM221BA6H8Z2 402 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 FSBPO95073 299 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 LUC7L3O95232 432 aaKnown RBP19.42■□□□□ 0.7
CPSF2-203ENST00000554290 TRUB2O95900 331 aaKnown RBP19.42■□□□□ 0.7
CPSF2-203ENST00000554290 SRPRAP08240 638 aaKnown RBP19.42■□□□□ 0.7
CPSF2-203ENST00000554290 BNC1Q01954 994 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 ARID5BQ14865 1188 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 ZC3H12AQ5D1E8 599 aaKnown RBP19.42■□□□□ 0.7
CPSF2-203ENST00000554290 PITRM1Q5JRX3 1037 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 TRIM65Q6PJ69 517 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 GBP6Q6ZN66 633 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 CHSY1Q86X52 802 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 ATP6V0D2Q8N8Y2 350 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 BIRC7Q96CA5 298 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 MYEOVQ96EZ4 313 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 MYO19Q96H55 970 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 CRACR2AQ9BSW2 395 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 IL21RQ9HBE5 538 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.42■□□□□ 0.7
CPSF2-203ENST00000554290 KIAA1468Q9P260 1216 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 CYTH4Q9UIA0 394 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 PCOLCE2Q9UKZ9 415 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 ERVW-1Q9UQF0 538 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 CEP83Q9Y592 693 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 PCDHGB2Q9Y5G2 931 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 FRYQ5TBA9 3013 aa19.42■□□□□ 0.7
CPSF2-203ENST00000554290 TARSL2A2RTX5 802 aaKnown RBP19.41■□□□□ 0.7
CPSF2-203ENST00000554290 SLC2A3P11169 496 aa19.41■□□□□ 0.7
CPSF2-203ENST00000554290 TACR2P21452 398 aa19.41■□□□□ 0.7
CPSF2-203ENST00000554290 CD27P26842 260 aa19.41■□□□□ 0.7
CPSF2-203ENST00000554290 PDCLQ13371 301 aa19.41■□□□□ 0.7
CPSF2-203ENST00000554290 SUZ12Q15022 739 aaKnown RBP19.41■□□□□ 0.7
CPSF2-203ENST00000554290 ARHGAP44Q17R89 818 aa19.41■□□□□ 0.7
CPSF2-203ENST00000554290 FSCBQ5H9T9 825 aa19.41■□□□□ 0.7
CPSF2-203ENST00000554290 RNF219Q5W0B1 726 aaPredicted RBP19.41■□□□□ 0.7
CPSF2-203ENST00000554290 RAP1GAP2Q684P5 730 aa19.41■□□□□ 0.7
CPSF2-203ENST00000554290 GLRX5Q86SX6 157 aa19.41■□□□□ 0.7
CPSF2-203ENST00000554290 DHX40Q8IX18 779 aaKnown RBP19.41■□□□□ 0.7
CPSF2-203ENST00000554290 ADAMTS14Q8WXS8 1223 aa19.41■□□□□ 0.7
CPSF2-203ENST00000554290 ZCCHC14Q8WYQ9 949 aaKnown RBP19.41■□□□□ 0.7
CPSF2-203ENST00000554290 MRGPRX3Q96LB0 322 aa19.41■□□□□ 0.7
CPSF2-203ENST00000554290 PABPC3Q9H361 631 aaKnown RBP19.41■□□□□ 0.7
CPSF2-203ENST00000554290 MTG2Q9H4K7 406 aa19.41■□□□□ 0.7
CPSF2-203ENST00000554290 TM9SF3Q9HD45 589 aa19.41■□□□□ 0.7
CPSF2-203ENST00000554290 FNDC3AQ9Y2H6 1198 aaKnown RBP19.41■□□□□ 0.7
CPSF2-203ENST00000554290 MUC22E2RYF6 1773 aaPredicted RBP19.41■□□□□ 0.7
CPSF2-203ENST00000554290 CACNA1EQ15878 2313 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 KCNU1A8MYU2 1149 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 F5H5T6 163 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 FLRT2O43155 660 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 CBFA2T3O75081 653 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 SIN3BO75182 1162 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 FTH1P19P0C7X4 201 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 SLC9A1P19634 815 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 NNMTP40261 264 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 GRIA4P48058 902 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 CDK17Q00537 523 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 ECT2LQ008S8 904 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 SLC12A1Q13621 1099 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 CST6Q15828 149 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 EFHC1Q5JVL4 640 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 SMYD5Q6GMV2 418 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 GJB7Q6PEY0 223 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 MMS22LQ6ZRQ5 1243 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 ACP6Q9NPH0 428 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 FBXL12Q9NXK8 326 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 APEX2Q9UBZ4 518 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 XPO7Q9UIA9 1087 aaKnown RBP19.4■□□□□ 0.7
CPSF2-203ENST00000554290 ANKRD6Q9Y2G4 727 aa19.4■□□□□ 0.7
CPSF2-203ENST00000554290 EDDM13A0A1B0GTR0 161 aa19.39■□□□□ 0.69
CPSF2-203ENST00000554290 IGLV3-25P01717 112 aa19.39■□□□□ 0.69
CPSF2-203ENST00000554290 GLI1P08151 1106 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms