RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 TTLL5Q6EMB2 1281 aa4.5□□□□□ -1.69
SCFD1-210ENST00000553693 PAQR4Q8N4S7 273 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-210ENST00000553693 WDR60Q8WVS4 1066 aa4.5□□□□□ -1.69
SCFD1-210ENST00000553693 CAMK1GQ96NX5 476 aa4.5□□□□□ -1.69
SCFD1-210ENST00000553693 ZNF347Q96SE7 839 aa4.5□□□□□ -1.69
SCFD1-210ENST00000553693 SF3B5Q9BWJ5 86 aaKnown RBP4.5□□□□□ -1.69
SCFD1-210ENST00000553693 CERS4Q9HA82 394 aa4.5□□□□□ -1.69
SCFD1-210ENST00000553693 SLC52A1Q9NWF4 448 aa4.5□□□□□ -1.69
SCFD1-210ENST00000553693 H0YGN5 161 aa4.49□□□□□ -1.69
SCFD1-210ENST00000553693 MDM4O15151 490 aa4.49□□□□□ -1.69
SCFD1-210ENST00000553693 NFATC1O95644 943 aa4.49□□□□□ -1.69
SCFD1-210ENST00000553693 WNT1P04628 370 aa4.49□□□□□ -1.69
SCFD1-210ENST00000553693 CHRNB1P11230 501 aa4.49□□□□□ -1.69
SCFD1-210ENST00000553693 HSPA7P48741 367 aa4.49□□□□□ -1.69
SCFD1-210ENST00000553693 ALDH18A1P54886 795 aaKnown RBP4.49□□□□□ -1.69
SCFD1-210ENST00000553693 RAB30Q15771 203 aa4.49□□□□□ -1.69
SCFD1-210ENST00000553693 NUGGCQ68CJ6 796 aa4.49□□□□□ -1.69
SCFD1-210ENST00000553693 ANKRD40Q6AI12 368 aa4.49□□□□□ -1.69
SCFD1-210ENST00000553693 TRABD2AQ86V40 505 aa4.49□□□□□ -1.69
SCFD1-210ENST00000553693 B4GALNT2Q8NHY0 566 aa4.49□□□□□ -1.69
SCFD1-210ENST00000553693 ASB5Q8WWX0 329 aa4.49□□□□□ -1.69
SCFD1-210ENST00000553693 ZPBPQ9BS86 351 aa4.49□□□□□ -1.69
SCFD1-210ENST00000553693 SELENONQ9NZV5 590 aa4.49□□□□□ -1.69
SCFD1-210ENST00000553693 GAGE12JA6NER3 117 aa4.48□□□□□ -1.69
SCFD1-210ENST00000553693 PRR23D1E9PI22 279 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-210ENST00000553693 IFNA2P01563 188 aa4.48□□□□□ -1.69
SCFD1-210ENST00000553693 ANXA6P08133 673 aa4.48□□□□□ -1.69
SCFD1-210ENST00000553693 PRR23D2P0DMB1 279 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-210ENST00000553693 IGFBP2P18065 325 aa4.48□□□□□ -1.69
SCFD1-210ENST00000553693 AK2P54819 239 aa4.48□□□□□ -1.69
SCFD1-210ENST00000553693 TAS2R50P59544 299 aa4.48□□□□□ -1.69
SCFD1-210ENST00000553693 MPEG1Q2M385 716 aa4.48□□□□□ -1.69
SCFD1-210ENST00000553693 C10orf76Q5T2E6 689 aa4.48□□□□□ -1.69
SCFD1-210ENST00000553693 KSR2Q6VAB6 950 aa4.48□□□□□ -1.69
SCFD1-210ENST00000553693 ADGRF3Q8IZF5 1079 aa4.48□□□□□ -1.69
SCFD1-210ENST00000553693 FBXL14Q8N1E6 418 aa4.48□□□□□ -1.69
SCFD1-210ENST00000553693 SMRP1Q8NCR6 262 aa4.48□□□□□ -1.69
SCFD1-210ENST00000553693 TMEM174Q8WUU8 243 aa4.48□□□□□ -1.69
SCFD1-210ENST00000553693 CCDC138Q96M89 665 aa4.48□□□□□ -1.69
SCFD1-210ENST00000553693 STK33Q9BYT3 514 aa4.48□□□□□ -1.69
SCFD1-210ENST00000553693 ARHGAP39Q9C0H5 1083 aa4.48□□□□□ -1.69
SCFD1-210ENST00000553693 SPAG4Q9NPE6 437 aa4.48□□□□□ -1.69
SCFD1-210ENST00000553693 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.48□□□□□ -1.69
SCFD1-210ENST00000553693 GEMIN8Q9NWZ8 242 aaKnown RBP4.48□□□□□ -1.69
SCFD1-210ENST00000553693 TNFSF13BQ9Y275 285 aa4.48□□□□□ -1.69
SCFD1-210ENST00000553693 LOC105369274A0A096LPK9 316 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 LOC102723532A0A0G2JNH3 316 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 EME2A4GXA9 379 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-210ENST00000553693 FOXO6A8MYZ6 492 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 KAT7O95251 611 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 CER1O95813 267 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 NGFRP08138 427 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 NPPBP16860 134 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 GRK5P34947 590 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 GNALP38405 381 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 ZXDBP98169 803 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 GALNT3Q14435 633 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 GRM4Q14833 912 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 DGKKQ5KSL6 1271 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 ERAP2Q6P179 960 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 NRSN1Q8IZ57 195 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 OR4N4Q8N0Y3 316 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 SPATA3Q8NHX4 192 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 REXO5Q96IC2 774 aaKnown RBP4.47□□□□□ -1.69
SCFD1-210ENST00000553693 ZNF479Q96JC4 524 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 MEIS3Q99687 375 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 NTPCRQ9BSD7 190 aaKnown RBP4.47□□□□□ -1.69
SCFD1-210ENST00000553693 EPS8L2Q9H6S3 715 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 SLC39A10Q9ULF5 831 aa4.47□□□□□ -1.69
SCFD1-210ENST00000553693 RPS10-NUDT3A0A1W2PQS6 291 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 TNFRSF13BO14836 293 aaPredicted RBP4.46□□□□□ -1.7
SCFD1-210ENST00000553693 MSI1O43347 362 aaKnown RBP4.46□□□□□ -1.7
SCFD1-210ENST00000553693 PLA2G6O60733 806 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 CAND2O75155 1236 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 KLKB1P03952 638 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 LCKP06239 509 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 CYP3A4P08684 503 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 ALDOCP09972 364 aaKnown RBP4.46□□□□□ -1.7
SCFD1-210ENST00000553693 ARRB2P32121 409 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 STAT1P42224 750 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 SHC2P98077 582 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 PICALMQ13492 652 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 ODF3L2Q3SX64 289 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 ALG10Q5BKT4 473 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 ALG10BQ5I7T1 473 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 ASPHD1Q5U4P2 390 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 HMBOX1Q6NT76 420 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 KDELC2Q7Z4H8 507 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 GATAD2AQ86YP4 633 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 IPO4Q8TEX9 1081 aaKnown RBP4.46□□□□□ -1.7
SCFD1-210ENST00000553693 ATP2A3Q93084 1043 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 MYLK2Q9H1R3 596 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 CCDC134Q9H6E4 229 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 HIF1ANQ9NWT6 349 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 PCDHA7Q9UN72 937 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 ZBTB1Q9Y2K1 713 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 PCDHGB2Q9Y5G2 931 aa4.46□□□□□ -1.7
SCFD1-210ENST00000553693 LMTK3Q96Q04 1460 aa4.45□□□□□ -1.7
SCFD1-210ENST00000553693 GTPBP1O00178 669 aaKnown RBP4.45□□□□□ -1.7
SCFD1-210ENST00000553693 RPP40O75818 363 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms