RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 BEND5Q7L4P6 421 aa18.85■□□□□ 0.61
SHMT2-206ENST00000553529 XYLT1Q86Y38 959 aa18.85■□□□□ 0.61
SHMT2-206ENST00000553529 SYT12Q8IV01 421 aa18.85■□□□□ 0.61
SHMT2-206ENST00000553529 DHX40Q8IX18 779 aaKnown RBP18.85■□□□□ 0.61
SHMT2-206ENST00000553529 AOPEPQ8N6M6 819 aa18.85■□□□□ 0.61
SHMT2-206ENST00000553529 EMC1Q8N766 993 aa18.85■□□□□ 0.61
SHMT2-206ENST00000553529 FIBINQ8TAL6 211 aa18.85■□□□□ 0.61
SHMT2-206ENST00000553529 WFIKKN2Q8TEU8 576 aa18.85■□□□□ 0.61
SHMT2-206ENST00000553529 AZIN2Q96A70 460 aa18.85■□□□□ 0.61
SHMT2-206ENST00000553529 SIPA1Q96FS4 1042 aa18.85■□□□□ 0.61
SHMT2-206ENST00000553529 FAM81BQ96LP2 452 aa18.85■□□□□ 0.61
SHMT2-206ENST00000553529 PCDHB18PQ96TA0 734 aa18.85■□□□□ 0.61
SHMT2-206ENST00000553529 TBCBQ99426 244 aa18.85■□□□□ 0.61
SHMT2-206ENST00000553529 SYNCQ9H7C4 482 aa18.85■□□□□ 0.61
SHMT2-206ENST00000553529 WSB2Q9NYS7 404 aaPredicted RBP18.85■□□□□ 0.61
SHMT2-206ENST00000553529 SERGEFQ9UGK8 458 aa18.85■□□□□ 0.61
SHMT2-206ENST00000553529 SLCO3A1Q9UIG8 710 aa18.85■□□□□ 0.61
SHMT2-206ENST00000553529 VANGL2Q9ULK5 521 aa18.85■□□□□ 0.61
SHMT2-206ENST00000553529 HS3ST4Q9Y661 456 aa18.85■□□□□ 0.61
SHMT2-206ENST00000553529 AP5Z1O43299 807 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 DLDP09622 509 aaKnown RBP18.84■□□□□ 0.61
SHMT2-206ENST00000553529 PDGFRAP16234 1089 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 ENGP17813 658 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 POLR2EP19388 210 aaKnown RBP18.84■□□□□ 0.61
SHMT2-206ENST00000553529 CD6P30203 668 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 ACSL1P33121 698 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 CDH5P33151 784 aaPredicted RBP18.84■□□□□ 0.61
SHMT2-206ENST00000553529 SULT1E1P49888 294 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 METAP1P53582 386 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 LIMK1P53667 647 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 JAM2P57087 298 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 NOMO3P69849 1222 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 CDK17Q00537 523 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 STX1AQ16623 288 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 IL31Q6EBC2 164 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 SASS6Q6UVJ0 657 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 SLC26A9Q7LBE3 791 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 C11orf74Q86VG3 221 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 OR2T3Q8NH03 318 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 SLC30A5Q8TAD4 765 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 PRCCQ92733 491 aaPredicted RBP18.84■□□□□ 0.61
SHMT2-206ENST00000553529 STK33Q9BYT3 514 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 MAGEB5Q9BZ81 275 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 PDCL3Q9H2J4 239 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 ITM2CQ9NQX7 267 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 GON4LQ3T8J9 2241 aa18.84■□□□□ 0.61
SHMT2-206ENST00000553529 H0Y626 953 aa18.83■□□□□ 0.6
SHMT2-206ENST00000553529 SIN3BO75182 1162 aa18.83■□□□□ 0.6
SHMT2-206ENST00000553529 ZNF217O75362 1048 aa18.83■□□□□ 0.6
SHMT2-206ENST00000553529 PAGE1O75459 146 aa18.83■□□□□ 0.6
SHMT2-206ENST00000553529 CNTN5O94779 1100 aa18.83■□□□□ 0.6
SHMT2-206ENST00000553529 ZNF445P59923 1031 aa18.83■□□□□ 0.6
SHMT2-206ENST00000553529 RPS14P62263 151 aaKnown RBP18.83■□□□□ 0.6
SHMT2-206ENST00000553529 FMO1Q01740 532 aa18.83■□□□□ 0.6
SHMT2-206ENST00000553529 TYRO3Q06418 890 aa18.83■□□□□ 0.6
SHMT2-206ENST00000553529 EFHC1Q5JVL4 640 aa18.83■□□□□ 0.6
SHMT2-206ENST00000553529 MPP7Q5T2T1 576 aa18.83■□□□□ 0.6
SHMT2-206ENST00000553529 CCDC183Q5T5S1 534 aa18.83■□□□□ 0.6
SHMT2-206ENST00000553529 FAM102AQ5T9C2 384 aaPredicted RBP18.83■□□□□ 0.6
SHMT2-206ENST00000553529 N4BP2L1Q5TBK1 243 aaPredicted RBP18.83■□□□□ 0.6
SHMT2-206ENST00000553529 SH3PXD2AQ5TCZ1 1133 aa18.83■□□□□ 0.6
SHMT2-206ENST00000553529 PEAR1Q5VY43 1037 aaPredicted RBP18.83■□□□□ 0.6
SHMT2-206ENST00000553529 CXorf57Q6NSI4 855 aaKnown RBP18.83■□□□□ 0.6
SHMT2-206ENST00000553529 LAYNQ6UX15 382 aa18.83■□□□□ 0.6
SHMT2-206ENST00000553529 CCAR2Q8N163 923 aaKnown RBP18.83■□□□□ 0.6
SHMT2-206ENST00000553529 RNF34Q969K3 372 aa18.83■□□□□ 0.6
SHMT2-206ENST00000553529 BTN2A3PQ96KV6 586 aa18.83■□□□□ 0.6
SHMT2-206ENST00000553529 NPY6RQ99463 290 aa18.83■□□□□ 0.6
SHMT2-206ENST00000553529 GTPBP2Q9BX10 602 aaKnown RBP18.83■□□□□ 0.6
SHMT2-206ENST00000553529 SIK2Q9H0K1 926 aa18.83■□□□□ 0.6
SHMT2-206ENST00000553529 C6orf106Q9H6K1 298 aaPredicted RBP18.83■□□□□ 0.6
SHMT2-206ENST00000553529 ASNSD1Q9NWL6 643 aa18.83■□□□□ 0.6
SHMT2-206ENST00000553529 ERVW-1Q9UQF0 538 aa18.83■□□□□ 0.6
SHMT2-206ENST00000553529 SPTBN2O15020 2390 aa18.83■□□□□ 0.6
SHMT2-206ENST00000553529 F5H5T6 163 aa18.82■□□□□ 0.6
SHMT2-206ENST00000553529 PLK4O00444 970 aa18.82■□□□□ 0.6
SHMT2-206ENST00000553529 NDUFS2O75306 463 aa18.82■□□□□ 0.6
SHMT2-206ENST00000553529 TOP3BO95985 862 aaKnown RBP18.82■□□□□ 0.6
SHMT2-206ENST00000553529 ZNF18P17022 549 aa18.82■□□□□ 0.6
SHMT2-206ENST00000553529 MYL5Q02045 173 aa18.82■□□□□ 0.6
SHMT2-206ENST00000553529 AUHQ13825 339 aaKnown RBP18.82■□□□□ 0.6
SHMT2-206ENST00000553529 ANO6Q4KMQ2 910 aa18.82■□□□□ 0.6
SHMT2-206ENST00000553529 ALFQ53S48 1182 aa18.82■□□□□ 0.6
SHMT2-206ENST00000553529 PSAPL1Q6NUJ1 521 aa18.82■□□□□ 0.6
SHMT2-206ENST00000553529 DNAAF5Q86Y56 855 aa18.82■□□□□ 0.6
SHMT2-206ENST00000553529 RGL4Q8IZJ4 473 aa18.82■□□□□ 0.6
SHMT2-206ENST00000553529 TMEM35BQ8NCS4 154 aa18.82■□□□□ 0.6
SHMT2-206ENST00000553529 TTC17Q96AE7 1141 aa18.82■□□□□ 0.6
SHMT2-206ENST00000553529 ZNF419Q96HQ0 510 aaPredicted RBP18.82■□□□□ 0.6
SHMT2-206ENST00000553529 CFAP57Q96MR6 1250 aa18.82■□□□□ 0.6
SHMT2-206ENST00000553529 METTL5Q9NRN9 209 aaKnown RBP18.82■□□□□ 0.6
SHMT2-206ENST00000553529 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.82■□□□□ 0.6
SHMT2-206ENST00000553529 LIMA1Q9UHB6 759 aaKnown RBP18.82■□□□□ 0.6
SHMT2-206ENST00000553529 PLA2G4CQ9UP65 541 aa18.82■□□□□ 0.6
SHMT2-206ENST00000553529 NCOR2Q9Y618 2525 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 ZBTB24O43167 697 aaPredicted RBP18.81■□□□□ 0.6
SHMT2-206ENST00000553529 TEX33O43247 280 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 TIMM44O43615 452 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 KCNK5O95279 499 aa18.81■□□□□ 0.6
SHMT2-206ENST00000553529 GLI1P08151 1106 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms