RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 VDRP11473 427 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 CSNK1EP49674 416 aaKnown RBP10.31□□□□□ -0.76
ACTN1-208ENST00000553370 CCT8P50990 548 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 COPAP53621 1224 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 TBX4P57082 545 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 FKBP3Q00688 224 aaKnown RBP10.31□□□□□ -0.76
ACTN1-208ENST00000553370 RING1Q06587 406 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 SCAPQ12770 1279 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 TRIP4Q15650 581 aaPredicted RBP10.31□□□□□ -0.76
ACTN1-208ENST00000553370 MBLAC2Q68D91 279 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 RFWD3Q6PCD5 774 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 TMEM270Q6UE05 265 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 UNC45BQ8IWX7 931 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 PPM1KQ8N3J5 372 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 HJURPQ8NCD3 748 aaPredicted RBP10.31□□□□□ -0.76
ACTN1-208ENST00000553370 ADAMTS14Q8WXS8 1223 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 SMARCE1Q969G3 411 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 SKA1Q96BD8 255 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 GOLPH3LQ9H4A5 285 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 C6orf106Q9H6K1 298 aaPredicted RBP10.31□□□□□ -0.76
ACTN1-208ENST00000553370 IL21RQ9HBE5 538 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 CNGB3Q9NQW8 809 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 SUN2Q9UH99 717 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 FKBPLQ9UIM3 349 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 PCOLCE2Q9UKZ9 415 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 CLEC4EQ9ULY5 219 aa10.31□□□□□ -0.76
ACTN1-208ENST00000553370 EIF4E1BA6NMX2 242 aaKnown RBP10.3□□□□□ -0.76
ACTN1-208ENST00000553370 YJEFN3A6XGL0 299 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 E7ENQ6 273 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 TK2O00142 265 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 PSMA7O14818 248 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 GJB3O75712 270 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 MOCS2O96007 188 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-208ENST00000553370 LTFP02788 710 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 DLDP09622 509 aaKnown RBP10.3□□□□□ -0.76
ACTN1-208ENST00000553370 FBXO45P0C2W1 286 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 HLA-FP30511 346 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 ACSL1P33121 698 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 GRK6P43250 576 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 ZBTB16Q05516 673 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 LRRC63Q05C16 580 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 CAMK2GQ13555 558 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-208ENST00000553370 ENPP2Q13822 863 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 COL9A2Q14055 689 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-208ENST00000553370 CBWD6Q4V339 395 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 ZCWPW2Q504Y3 356 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 CBWD3Q5JTY5 395 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 CBWD5Q5RIA9 395 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 ZNF658Q5TYW1 1059 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-208ENST00000553370 PM20D1Q6GTS8 502 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 BLOC1S3Q6QNY0 202 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 C19orf48Q6RUI8 117 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 PROSER1Q86XN7 944 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 FAM217AQ8IXS0 508 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 CARNMT1Q8N4J0 409 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 FAM149B1Q96BN6 582 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 ACE2Q9BYF1 805 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-208ENST00000553370 GTPBP4Q9BZE4 634 aaKnown RBP10.3□□□□□ -0.76
ACTN1-208ENST00000553370 MIS12Q9H081 205 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 SGK2Q9HBY8 427 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 ST7Q9NRC1 585 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 AASDHPPTQ9NRN7 309 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 FTSJ1Q9UET6 329 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 KIAA1257Q9ULG3 409 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.3□□□□□ -0.76
ACTN1-208ENST00000553370 ANKRD6Q9Y2G4 727 aa10.3□□□□□ -0.76
ACTN1-208ENST00000553370 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.3□□□□□ -0.76
ACTN1-208ENST00000553370 FAM237AA0A1B0GTK4 181 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 O00370 1275 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 CAPN9O14815 690 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 IRAK2O43187 625 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 RNASEH2AO75792 299 aaKnown RBP10.29□□□□□ -0.76
ACTN1-208ENST00000553370 FBXO21O94952 628 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 IGLV3-19P01714 112 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 APOEP02649 317 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 PAEPP09466 180 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 KRT5P13647 590 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 ABCB4P21439 1286 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 BRD2P25440 801 aaKnown RBP10.29□□□□□ -0.76
ACTN1-208ENST00000553370 PRCPP42785 496 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 GRIA4P48058 902 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 DAOAP59103 153 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 RPS14P62263 151 aaKnown RBP10.29□□□□□ -0.76
ACTN1-208ENST00000553370 IL9RQ01113 521 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 STILQ15468 1287 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 KIF19Q2TAC6 998 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 TMEM215Q68D42 235 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 LAYNQ6UX15 382 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 DHX40Q8IX18 779 aaKnown RBP10.29□□□□□ -0.76
ACTN1-208ENST00000553370 GALNT15Q8N3T1 639 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 IRGQQ8WZA9 623 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 P2RY11Q96G91 374 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 SERPINB11Q96P15 392 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 OMDQ99983 421 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 TRIM62Q9BVG3 475 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 METTL14Q9HCE5 456 aaKnown RBP10.29□□□□□ -0.76
ACTN1-208ENST00000553370 TM9SF3Q9HD45 589 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 TJP2Q9UDY2 1190 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 PCDHGB2Q9Y5G2 931 aa10.29□□□□□ -0.76
ACTN1-208ENST00000553370 SNX11Q9Y5W9 270 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms