RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 OR6B1O95007 311 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 IQCF3P0C7M6 154 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 MCF2P10911 925 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 TFE3P19532 575 aaPredicted RBP17.99■□□□□ 0.47
SYNE3-202ENST00000553340 TMEM132DQ14C87 1099 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 TLR1Q15399 786 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 ZNF781Q8N8C0 355 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 TRAPPC12Q8WVT3 735 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 SNX15Q9NRS6 342 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 PRPF19Q9UMS4 504 aaKnown RBP17.99■□□□□ 0.47
SYNE3-202ENST00000553340 NOP56O00567 594 aaKnown RBP17.99■□□□□ 0.47
SYNE3-202ENST00000553340 STK10O94804 968 aaKnown RBP17.99■□□□□ 0.47
SYNE3-202ENST00000553340 POLBP06746 335 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 SMIM18P0DKX4 95 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 SETSIPP0DME0 302 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 EDNRBP24530 442 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 PTPN9P43378 593 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 RPL5P46777 297 aaKnown RBP17.99■□□□□ 0.47
SYNE3-202ENST00000553340 ZNF280AP59817 542 aaPredicted RBP17.99■□□□□ 0.47
SYNE3-202ENST00000553340 RBP5P82980 135 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 SLC9B1Q4ZJI4 515 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 GRTP1Q5TC63 336 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 ARMC3Q5W041 872 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 NCBP2-AS2Q69YL0 99 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 TTC30AQ86WT1 665 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 SREK1Q8WXA9 508 aaKnown RBP17.99■□□□□ 0.47
SYNE3-202ENST00000553340 LENG8Q96PV6 779 aaPredicted RBP17.99■□□□□ 0.47
SYNE3-202ENST00000553340 CPNE1Q99829 537 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 ZNF358Q9NW07 568 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 MTMR10Q9NXD2 777 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 HACL1Q9UJ83 578 aa17.99■□□□□ 0.47
SYNE3-202ENST00000553340 LGR5O75473 907 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 DGKIO75912 1065 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 CLPTM1O96005 669 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 ERVK-10P10266 1014 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 THRAP10827 490 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 CLCN3P51790 818 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 SMAD1Q15797 465 aaKnown RBP17.98■□□□□ 0.47
SYNE3-202ENST00000553340 CNGA3Q16281 694 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 SLC10A6Q3KNW5 377 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 PKDCCQ504Y2 493 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 RARS2Q5T160 578 aaKnown RBP17.98■□□□□ 0.47
SYNE3-202ENST00000553340 EFCAB12Q6NXP0 572 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 ZDHHC17Q8IUH5 632 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 TNS4Q8IZW8 715 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 PRICKLE1Q96MT3 831 aaPredicted RBP17.98■□□□□ 0.47
SYNE3-202ENST00000553340 KCTD15Q96SI1 283 aaPredicted RBP17.98■□□□□ 0.47
SYNE3-202ENST00000553340 GPR20Q99678 358 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 B3GNT5Q9BYG0 378 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 MAGEB5Q9BZ81 275 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 SYBUQ9NX95 663 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 E2F8A0AVK6 867 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 PENKP01210 267 aaPredicted RBP17.98■□□□□ 0.47
SYNE3-202ENST00000553340 PMLP29590 882 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 ATXN1P54253 815 aaKnown RBP17.98■□□□□ 0.47
SYNE3-202ENST00000553340 HSDL1Q3SXM5 330 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 PABPC1LQ4VXU2 614 aaKnown RBP17.98■□□□□ 0.47
SYNE3-202ENST00000553340 PLPPR4Q7Z2D5 763 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 CMC1Q7Z7K0 106 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 SLC35F5Q8WV83 523 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 CERS2Q96G23 380 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 MPP4Q96JB8 637 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 LRGUKQ96M69 825 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 LGMNQ99538 433 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 OXCT2Q9BYC2 517 aaPredicted RBP17.98■□□□□ 0.47
SYNE3-202ENST00000553340 OCEL1Q9H607 264 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 TCF7L2Q9NQB0 619 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 GGA3Q9NZ52 723 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 PTTG2Q9NZH5 202 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 TMCO1Q9UM00 188 aa17.98■□□□□ 0.47
SYNE3-202ENST00000553340 MYO18AQ92614 2054 aaKnown RBP17.98■□□□□ 0.47
SYNE3-202ENST00000553340 TMEM114B3SHH9 223 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 AIM2O14862 343 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 YY1P25490 414 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 GMPRP36959 345 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 MLH1P40692 756 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 SERPINB8P50452 374 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 NUDT2P50583 147 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 C16orf89Q6UX73 402 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 FERMT1Q9BQL6 677 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 DPP3Q9NY33 737 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 GTF2IRD1Q9UHL9 959 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 ADAM28Q9UKQ2 775 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 RAB26Q9ULW5 256 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 RPS6KL1Q9Y6S9 549 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 SOWAHBA6NEL2 793 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 KPNA7A9QM74 516 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 DNAJA2O60884 412 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 FBXO21O94952 628 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 STAU1O95793 577 aaKnown RBP17.97■□□□□ 0.47
SYNE3-202ENST00000553340 SPATA31D3P0C874 917 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 SERPINB5P36952 375 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 SPATA31D4Q6ZUB0 917 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 ACOT1Q86TX2 421 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 TMEM126BQ8IUX1 230 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 DCLK2Q8N568 766 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 CATSPER1Q8NEC5 780 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 JDP2Q8WYK2 163 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 FAM49BQ9NUQ9 324 aa17.97■□□□□ 0.47
SYNE3-202ENST00000553340 BCAP29Q9UHQ4 241 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms