RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 SDHBP21912 280 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 SDC4P31431 198 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 CD70P32970 193 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 FLT3P36888 993 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 LMAN2Q12907 356 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 ASIC2Q16515 512 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 ARL13BQ3SXY8 428 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 FNDC3BQ53EP0 1204 aaKnown RBP15.84■□□□□ 0.13
SHMT2-204ENST00000553324 ACAD10Q6JQN1 1059 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 FBXL22Q6P050 247 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 LRRC31Q6UY01 552 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 METTL3Q86U44 580 aaKnown RBP15.84■□□□□ 0.13
SHMT2-204ENST00000553324 KIAA2013Q8IYS2 634 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 KDM1BQ8NB78 822 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 LMLNQ96KR4 655 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 RPRD1AQ96P16 312 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-204ENST00000553324 TBCBQ99426 244 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 SELENOOQ9BVL4 669 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 TMEM245Q9H330 911 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 FBRSQ9HAH7 460 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 CD248Q9HCU0 757 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 METTL5Q9NRN9 209 aaKnown RBP15.84■□□□□ 0.13
SHMT2-204ENST00000553324 HS3ST4Q9Y661 456 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 CFAP54Q96N23 3096 aa15.83■□□□□ 0.13
SHMT2-204ENST00000553324 EP300Q09472 2414 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-204ENST00000553324 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-204ENST00000553324 SIGLEC16A6NMB1 481 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 PRR5-ARHGAP8B1AHC4 643 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 DCLK1O15075 740 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 CLDN11O75508 207 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 EPN2O95208 641 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 ADCY5O95622 1261 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 EPHX1P07099 455 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 DESP17661 470 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 NNMTP40261 264 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 ARHGAP8P85298 464 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 SULT2A1Q06520 285 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 PTP4A2Q12974 167 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 ZNF177Q13360 481 aaPredicted RBP15.83■□□□□ 0.12
SHMT2-204ENST00000553324 CSRP2Q16527 193 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 MAP7D1Q3KQU3 841 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 C5orf22Q49AR2 442 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 KIAA1211LQ6NV74 962 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 LPCAT2Q7L5N7 544 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 BNIPLQ7Z465 357 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 CCAR2Q8N163 923 aaKnown RBP15.83■□□□□ 0.12
SHMT2-204ENST00000553324 C3orf20Q8ND61 904 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 WFDC5Q8TCV5 224 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 RXFP2Q8WXD0 754 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 SORCS1Q8WY21 1168 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 MYEOVQ96EZ4 313 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 MRGPRX1Q96LB2 322 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 CFAP57Q96MR6 1250 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 SIK2Q9H0K1 926 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 PRDM16Q9HAZ2 1276 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 CALCOCO1Q9P1Z2 691 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 VANGL2Q9ULK5 521 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 USP18Q9UMW8 372 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 RAD54BQ9Y620 910 aa15.83■□□□□ 0.12
SHMT2-204ENST00000553324 BZW2Q9Y6E2 419 aaKnown RBP15.83■□□□□ 0.12
SHMT2-204ENST00000553324 KIAA1549LQ6ZVL6 1849 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 GPR179Q6PRD1 2367 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 A0A1W2PQJ5 194 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 C2CD4BA6NLJ0 364 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 AP5Z1O43299 807 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 SRPRAP08240 638 aaKnown RBP15.82■□□□□ 0.12
SHMT2-204ENST00000553324 GZMAP12544 262 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 NDUFV2P19404 249 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 PRKCIP41743 596 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 DPP6P42658 865 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 PTPN9P43378 593 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 PLK1P53350 603 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 CDH4P55283 916 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 LMNB2Q03252 620 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 KLHL30Q0D2K2 578 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 SPEM2Q0P670 501 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 FUT11Q495W5 492 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 FSCBQ5H9T9 825 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 OTUD1Q5VV17 481 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-204ENST00000553324 PMS2CLQ68D20 193 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 MON1BQ7L1V2 547 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 STRADAQ7RTN6 431 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 TMPRSS6Q8IU80 811 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 CYB5D2Q8WUJ1 264 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 RLN3Q8WXF3 142 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 PRCCQ92733 491 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-204ENST00000553324 SYN2Q92777 582 aaPredicted RBP15.82■□□□□ 0.12
SHMT2-204ENST00000553324 SIPA1Q96FS4 1042 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 TTYH3Q9C0H2 523 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 ARRDC1-AS1Q9H2J1 176 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 RETREG1Q9H6L5 497 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 SEMA4GQ9NTN9 838 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 INVSQ9Y283 1065 aa15.82■□□□□ 0.12
SHMT2-204ENST00000553324 WDR87Q6ZQQ6 2873 aa15.81■□□□□ 0.12
SHMT2-204ENST00000553324 DRGXA6NNA5 263 aa15.81■□□□□ 0.12
SHMT2-204ENST00000553324 ACADMP11310 421 aa15.81■□□□□ 0.12
SHMT2-204ENST00000553324 TFE3P19532 575 aaPredicted RBP15.81■□□□□ 0.12
SHMT2-204ENST00000553324 TGM1P22735 817 aa15.81■□□□□ 0.12
SHMT2-204ENST00000553324 PRKCHP24723 683 aa15.81■□□□□ 0.12
SHMT2-204ENST00000553324 OXTRP30559 389 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms