RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 OR52K2Q8NGK3 314 aa19.93■□□□□ 0.78
PTCH1-227ENST00000553256 JOSD2Q8TAC2 188 aa19.93■□□□□ 0.78
PTCH1-227ENST00000553256 CYB5D2Q8WUJ1 264 aa19.93■□□□□ 0.78
PTCH1-227ENST00000553256 UCMAQ8WVF2 138 aa19.93■□□□□ 0.78
PTCH1-227ENST00000553256 CENPIQ92674 756 aaPredicted RBP19.93■□□□□ 0.78
PTCH1-227ENST00000553256 PCMTD1Q96MG8 357 aaPredicted RBP19.93■□□□□ 0.78
PTCH1-227ENST00000553256 C11orf70Q9BRQ4 267 aa19.93■□□□□ 0.78
PTCH1-227ENST00000553256 AIPL1Q9NZN9 384 aa19.93■□□□□ 0.78
PTCH1-227ENST00000553256 STIM2Q9P246 746 aa19.93■□□□□ 0.78
PTCH1-227ENST00000553256 ZNF212Q9UDV6 495 aa19.93■□□□□ 0.78
PTCH1-227ENST00000553256 RAB23Q9ULC3 237 aa19.93■□□□□ 0.78
PTCH1-227ENST00000553256 STAP1Q9ULZ2 295 aa19.93■□□□□ 0.78
PTCH1-227ENST00000553256 PCDHGA5Q9Y5G8 931 aa19.93■□□□□ 0.78
PTCH1-227ENST00000553256 SYNJ2BP-COX16A0A087WUM0 186 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 LRRC53A6NM62 1247 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 GOLGA8SH3BPF8 625 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 GJB6O95452 261 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 FERP16591 822 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 ABCB4P21439 1286 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 PRKCIP41743 596 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 SULT1E1P49888 294 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 PLK1P53350 603 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 FANCCQ00597 558 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 MTA1Q13330 715 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 ARID5BQ14865 1188 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 CSRP2Q16527 193 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 CCDC14Q49A88 953 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.92■□□□□ 0.78
PTCH1-227ENST00000553256 C11orf74Q86VG3 221 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 GPR161Q8N6U8 529 aaKnown RBP19.92■□□□□ 0.78
PTCH1-227ENST00000553256 CFAP57Q96MR6 1250 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 EDEM3Q9BZQ6 932 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 CIPCQ9C0C6 399 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 METTL5Q9NRN9 209 aaKnown RBP19.92■□□□□ 0.78
PTCH1-227ENST00000553256 TMPRSS4Q9NRS4 437 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 SEMA4GQ9NTN9 838 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 COX16Q9P0S2 106 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 OR51B4Q9Y5P0 310 aa19.92■□□□□ 0.78
PTCH1-227ENST00000553256 IGLV3-10A0A075B6K4 115 aa19.91■□□□□ 0.78
PTCH1-227ENST00000553256 IGHV1OR15-9A0A0B4J2B8 117 aa19.91■□□□□ 0.78
PTCH1-227ENST00000553256 DRGXA6NNA5 263 aa19.91■□□□□ 0.78
PTCH1-227ENST00000553256 F5H5T6 163 aa19.91■□□□□ 0.78
PTCH1-227ENST00000553256 F9P00740 461 aa19.91■□□□□ 0.78
PTCH1-227ENST00000553256 IGLV3-19P01714 112 aa19.91■□□□□ 0.78
PTCH1-227ENST00000553256 GGCXP38435 758 aa19.91■□□□□ 0.78
PTCH1-227ENST00000553256 ARID5AQ03989 594 aa19.91■□□□□ 0.78
PTCH1-227ENST00000553256 SKOR2Q2VWA4 1001 aaPredicted RBP19.91■□□□□ 0.78
PTCH1-227ENST00000553256 PITRM1Q5JRX3 1037 aa19.91■□□□□ 0.78
PTCH1-227ENST00000553256 SDE2Q6IQ49 451 aa19.91■□□□□ 0.78
PTCH1-227ENST00000553256 CIR1Q86X95 450 aaPredicted RBP19.91■□□□□ 0.78
PTCH1-227ENST00000553256 CCAR2Q8N163 923 aaKnown RBP19.91■□□□□ 0.78
PTCH1-227ENST00000553256 KDM1BQ8NB78 822 aa19.91■□□□□ 0.78
PTCH1-227ENST00000553256 MSANTD4Q8NCY6 345 aa19.91■□□□□ 0.78
PTCH1-227ENST00000553256 C1orf74Q96LT6 269 aa19.91■□□□□ 0.78
PTCH1-227ENST00000553256 TKTL2Q9H0I9 626 aa19.91■□□□□ 0.78
PTCH1-227ENST00000553256 TMEM51Q9NW97 253 aa19.91■□□□□ 0.78
PTCH1-227ENST00000553256 DLL3Q9NYJ7 618 aa19.91■□□□□ 0.78
PTCH1-227ENST00000553256 TAS2R14Q9NYV8 317 aa19.91■□□□□ 0.78
PTCH1-227ENST00000553256 USP36Q9P275 1121 aaKnown RBP19.91■□□□□ 0.78
PTCH1-227ENST00000553256 TNRC6BQ9UPQ9 1833 aaKnown RBP19.9■□□□□ 0.78
PTCH1-227ENST00000553256 A0A1B0GVM2 712 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 BCLAF3A2AJT9 711 aaKnown RBP19.9■□□□□ 0.78
PTCH1-227ENST00000553256 TCAF2A6NFQ2 919 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 HLA-EP13747 358 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 CSKP41240 450 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 CTSOP43234 321 aaPredicted RBP19.9■□□□□ 0.78
PTCH1-227ENST00000553256 PTPN9P43378 593 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 C1QBPQ07021 282 aaKnown RBP19.9■□□□□ 0.78
PTCH1-227ENST00000553256 PLEKHG6Q3KR16 790 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 FILIP1LQ4L180 1135 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 SPDYCQ5MJ68 293 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 SH3PXD2AQ5TCZ1 1133 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 TTC39BQ5VTQ0 682 aaPredicted RBP19.9■□□□□ 0.78
PTCH1-227ENST00000553256 PEAR1Q5VY43 1037 aaPredicted RBP19.9■□□□□ 0.78
PTCH1-227ENST00000553256 PHLDB2Q86SQ0 1253 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 APCDD1Q8J025 514 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 CARNMT1Q8N4J0 409 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 C3orf20Q8ND61 904 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 RXFP2Q8WXD0 754 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 ERLEC1Q96DZ1 483 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 ARRDC1-AS1Q9H2J1 176 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 WDCPQ9H6R7 721 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 ADAM22Q9P0K1 906 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 SLC12A6Q9UHW9 1150 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 TBC1D30Q9Y2I9 924 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 SNX10Q9Y5X0 201 aa19.9■□□□□ 0.78
PTCH1-227ENST00000553256 CNTN5O94779 1100 aa19.89■□□□□ 0.77
PTCH1-227ENST00000553256 RHOBTB1O94844 696 aa19.89■□□□□ 0.77
PTCH1-227ENST00000553256 ZNF806P0C7X5 589 aa19.89■□□□□ 0.77
PTCH1-227ENST00000553256 MZF1P28698 734 aaPredicted RBP19.89■□□□□ 0.77
PTCH1-227ENST00000553256 RFC1P35251 1148 aaPredicted RBP19.89■□□□□ 0.77
PTCH1-227ENST00000553256 NSFP46459 744 aaKnown RBP19.89■□□□□ 0.77
PTCH1-227ENST00000553256 DEUP1Q05D60 604 aa19.89■□□□□ 0.77
PTCH1-227ENST00000553256 E2F5Q15329 346 aa19.89■□□□□ 0.77
PTCH1-227ENST00000553256 ALFQ53S48 1182 aa19.89■□□□□ 0.77
PTCH1-227ENST00000553256 HGSNATQ68CP4 663 aa19.89■□□□□ 0.77
PTCH1-227ENST00000553256 SERPINA13PQ6UXR4 307 aa19.89■□□□□ 0.77
PTCH1-227ENST00000553256 ITIH6Q6UXX5 1313 aa19.89■□□□□ 0.77
PTCH1-227ENST00000553256 ZNF571Q7Z3V5 609 aaPredicted RBP19.89■□□□□ 0.77
PTCH1-227ENST00000553256 RMDN1Q96DB5 314 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms