RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 MUC22E2RYF6 1773 aaPredicted RBP14.57□□□□□ -0.08
PTCH1-226ENST00000553011 K7ESF4 209 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 SGK1O00141 431 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 CYP1A2P05177 515 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 SP9P0CG40 484 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 PABPC1P11940 636 aaKnown RBP14.57□□□□□ -0.08
PTCH1-226ENST00000553011 TDGF1P13385 188 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 ADRA1BP35368 520 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 WASP42768 502 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 PTPN5P54829 565 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 LMAN2Q12907 356 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 CDH18Q13634 790 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 DMC1Q14565 340 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 C5orf22Q49AR2 442 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 FSCBQ5H9T9 825 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 ARTNQ5T4W7 220 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 SCYL2Q6P3W7 929 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 CHST9Q7L1S5 443 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 ZNF683Q8IZ20 524 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 CCAR2Q8N163 923 aaKnown RBP14.57□□□□□ -0.08
PTCH1-226ENST00000553011 ARFGAP1Q8N6T3 406 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.57□□□□□ -0.08
PTCH1-226ENST00000553011 TXNDC5Q8NBS9 432 aaKnown RBP14.57□□□□□ -0.08
PTCH1-226ENST00000553011 FIBINQ8TAL6 211 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 SORCS1Q8WY21 1168 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 ACDQ96AP0 544 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 LMLNQ96KR4 655 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 HAPLN3Q96S86 360 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 ACOX2Q99424 681 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 NUP85Q9BW27 656 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 MRPL47Q9HD33 250 aaKnown RBP14.57□□□□□ -0.08
PTCH1-226ENST00000553011 GGA2Q9UJY4 613 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 FBXO4Q9UKT5 387 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 MMP17Q9ULZ9 603 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 STARD13Q9Y3M8 1113 aa14.57□□□□□ -0.08
PTCH1-226ENST00000553011 RIF1Q5UIP0 2472 aaKnown RBP14.56□□□□□ -0.08
PTCH1-226ENST00000553011 A0A1B0GVM2 712 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 TCAF2A6NFQ2 919 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 E9PAM4 449 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 H0Y626 953 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 ADAM23O75077 832 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 CNTN5O94779 1100 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 PAPSS2O95340 614 aaPredicted RBP14.56□□□□□ -0.08
PTCH1-226ENST00000553011 HNRNPLP14866 589 aaKnown RBP eCLIP14.56□□□□□ -0.08
PTCH1-226ENST00000553011 ARL13BQ3SXY8 428 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 FUT11Q495W5 492 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 ALFQ53S48 1182 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 SYT13Q7L8C5 426 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 KIAA0907Q7Z7F0 614 aaPredicted RBP14.56□□□□□ -0.08
PTCH1-226ENST00000553011 ADIPOR2Q86V24 386 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 SPC24Q8NBT2 197 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 WFIKKN2Q8TEU8 576 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 FNIP1Q8TF40 1166 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 NTAN1Q96AB6 310 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 BTBD6Q96KE9 485 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 C1orf74Q96LT6 269 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 HHIPQ96QV1 700 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 CIPCQ9C0C6 399 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 FAM86C1Q9NVL1 165 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 ELOVL2Q9NXB9 296 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 MPP6Q9NZW5 540 aa14.56□□□□□ -0.08
PTCH1-226ENST00000553011 INTS6Q9UL03 887 aaKnown RBP14.56□□□□□ -0.08
PTCH1-226ENST00000553011 GPR179Q6PRD1 2367 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 DRGXA6NNA5 263 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 FAM72CH0Y354 149 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 SRGAP2O75044 1071 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 H2AFZP0C0S5 128 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 CDC25BP30305 580 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 NUMBP49757 651 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 DMWDQ09019 674 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 FAM72AQ5TYM5 149 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 TTC39BQ5VTQ0 682 aaPredicted RBP14.55□□□□□ -0.08
PTCH1-226ENST00000553011 DAB2IPQ5VWQ8 1189 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 MBLAC2Q68D91 279 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 FAM72DQ6L9T8 149 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 TMEM92Q6UXU6 159 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 LRRC31Q6UY01 552 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 H2AFVQ71UI9 128 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 SLFN11Q7Z7L1 901 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 FAM72BQ86X60 149 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 CCDC117Q8IWD4 279 aaPredicted RBP14.55□□□□□ -0.08
PTCH1-226ENST00000553011 ABCA7Q8IZY2 2146 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 AHI1Q8N157 1196 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 PYROXD2Q8N2H3 581 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 ZNF557Q8N988 423 aaPredicted RBP14.55□□□□□ -0.08
PTCH1-226ENST00000553011 KCNV2Q8TDN2 545 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 UCMAQ8WVF2 138 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 CTNNBL1Q8WYA6 563 aaPredicted RBP14.55□□□□□ -0.08
PTCH1-226ENST00000553011 ERLEC1Q96DZ1 483 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 PANX2Q96RD6 677 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 PEBP4Q96S96 227 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 OSBPL2Q9H1P3 480 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 CACNA2D2Q9NY47 1150 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 OR12D3Q9UGF7 316 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 SLC8A2Q9UPR5 921 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 GON4LQ3T8J9 2241 aa14.55□□□□□ -0.08
PTCH1-226ENST00000553011 NYNRINQ9P2P1 1898 aaKnown RBP14.55□□□□□ -0.08
PTCH1-226ENST00000553011 IGLV3-10A0A075B6K4 115 aa14.54□□□□□ -0.08
PTCH1-226ENST00000553011 WASH3PC4AMC7 463 aa14.54□□□□□ -0.08
PTCH1-226ENST00000553011 CLDN11O75508 207 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms