RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 MAP3K21Q5TCX8 1036 aa12.68□□□□□ -0.38
HDAC7-230ENST00000552960 ANKRD23Q86SG2 305 aa12.68□□□□□ -0.38
HDAC7-230ENST00000552960 PSAT1Q9Y617 370 aa12.68□□□□□ -0.38
HDAC7-230ENST00000552960 RPS6KL1Q9Y6S9 549 aa12.68□□□□□ -0.38
HDAC7-230ENST00000552960 CXCL8P10145 99 aa12.68□□□□□ -0.38
HDAC7-230ENST00000552960 RALBP11234 206 aa12.68□□□□□ -0.38
HDAC7-230ENST00000552960 FGF3P11487 239 aaPredicted RBP12.68□□□□□ -0.38
HDAC7-230ENST00000552960 FDFT1P37268 417 aa12.68□□□□□ -0.38
HDAC7-230ENST00000552960 PTPN11Q06124 597 aaPredicted RBP12.68□□□□□ -0.38
HDAC7-230ENST00000552960 FAM47CQ5HY64 1035 aa12.68□□□□□ -0.38
HDAC7-230ENST00000552960 MBLAC2Q68D91 279 aa12.68□□□□□ -0.38
HDAC7-230ENST00000552960 NXNQ6DKJ4 435 aa12.68□□□□□ -0.38
HDAC7-230ENST00000552960 ATG14Q6ZNE5 492 aa12.68□□□□□ -0.38
HDAC7-230ENST00000552960 TMC7Q7Z402 723 aa12.68□□□□□ -0.38
HDAC7-230ENST00000552960 MAVSQ7Z434 540 aa12.68□□□□□ -0.38
HDAC7-230ENST00000552960 FBXW8Q8N3Y1 598 aa12.68□□□□□ -0.38
HDAC7-230ENST00000552960 UBR7Q8N806 425 aa12.68□□□□□ -0.38
HDAC7-230ENST00000552960 HAPLN3Q96S86 360 aa12.68□□□□□ -0.38
HDAC7-230ENST00000552960 MRPL4Q9BYD3 311 aaKnown RBP12.68□□□□□ -0.38
HDAC7-230ENST00000552960 SDCBP2Q9H190 292 aa12.68□□□□□ -0.38
HDAC7-230ENST00000552960 DHX35Q9H5Z1 703 aaKnown RBP12.68□□□□□ -0.38
HDAC7-230ENST00000552960 PEX1O43933 1283 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 CCNT2O60583 730 aaKnown RBP12.67□□□□□ -0.38
HDAC7-230ENST00000552960 ALDOAP04075 364 aaKnown RBP12.67□□□□□ -0.38
HDAC7-230ENST00000552960 ENO3P13929 434 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-230ENST00000552960 MYBPC3Q14896 1274 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 NADK2Q4G0N4 442 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 EEF1DP3Q658K8 133 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 ARCQ7LC44 396 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.67□□□□□ -0.38
HDAC7-230ENST00000552960 C12orf29Q8N999 325 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 SHCBP1Q8NEM2 672 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 PCDH19Q8TAB3 1148 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 DCUN1D1Q96GG9 259 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 SIGLEC10Q96LC7 697 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 TMEM216Q9P0N5 145 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 ARHGAP26Q9UNA1 814 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 EVPLQ92817 2033 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 ASB14A6NK59 587 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 OGTO15294 1046 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 BIRC5O15392 142 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 ITGB3P05106 788 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 PRKCBP05771 671 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 ITGA2BP08514 1039 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 SRGAP2BP0DMP2 458 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 ERVK-10P10266 1014 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 COX4I1P13073 169 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 ATXN1P54253 815 aaKnown RBP12.67□□□□□ -0.38
HDAC7-230ENST00000552960 CCNA1P78396 465 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 HNRNPDQ14103 355 aaKnown RBP12.67□□□□□ -0.38
HDAC7-230ENST00000552960 ACAP1Q15027 740 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 C6orf52Q5T4I8 152 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 DGCR14Q96DF8 476 aaKnown RBP12.67□□□□□ -0.38
HDAC7-230ENST00000552960 LENG8Q96PV6 779 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-230ENST00000552960 WDR55Q9H6Y2 383 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-230ENST00000552960 XPNPEP3Q9NQH7 507 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 ADGRA2Q96PE1 1338 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 SYNJ2BP-COX16A0A087WUM0 186 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 PLIN3O60664 434 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 ASLP04424 464 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 SERPINE1P05121 402 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 ARRB2P32121 409 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 MLH1P40692 756 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 GABRB2P47870 512 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 ZNF143P52747 638 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-230ENST00000552960 TUBB3Q13509 450 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 PPM1LQ5SGD2 360 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 TRNP1Q6NT89 227 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 SCUBE3Q8IX30 993 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 ACTRT2Q8TDY3 377 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 FNIP1Q8TF40 1166 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 CDKL2Q92772 493 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 MARK4Q96L34 752 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 CDRT15Q96T59 188 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 C16orf70Q9BSU1 422 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 CNPY3Q9BT09 278 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 COG4Q9H9E3 785 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 PNPLA8Q9NP80 782 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 FAM49BQ9NUQ9 324 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 COX16Q9P0S2 106 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 MORF4L1Q9UBU8 362 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 EMCNQ9ULC0 261 aa12.67□□□□□ -0.38
HDAC7-230ENST00000552960 CCDC78A2IDD5 438 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 ZBTB14O43829 449 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 AMHP03971 560 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 CYP2B6P20813 491 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 CTGFP29279 349 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 CDH5P33151 784 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-230ENST00000552960 SERPINB9P50453 376 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 FLOT2Q14254 428 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 GRB14Q14449 540 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 SLC9B1Q4ZJI4 515 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 KLHDC10Q6PID8 442 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 UGT2A3Q6UWM9 527 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 FAM183BPQ6ZVS7 135 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 PTAR1Q7Z6K3 402 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-230ENST00000552960 PQLC3Q8N755 202 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 ZNF781Q8N8C0 355 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 JADE3Q92613 823 aa12.66□□□□□ -0.38
HDAC7-230ENST00000552960 CPB2Q96IY4 423 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms