RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 FAM71BQ8TC56 605 aa9□□□□□ -0.97
AC055716.2-201ENST00000552545 IGSF8Q969P0 613 aa9□□□□□ -0.97
AC055716.2-201ENST00000552545 CCDC114Q96M63 670 aa9□□□□□ -0.97
AC055716.2-201ENST00000552545 CDX2Q99626 313 aaPredicted RBP9□□□□□ -0.97
AC055716.2-201ENST00000552545 C10orf88Q9H8K7 445 aa9□□□□□ -0.97
AC055716.2-201ENST00000552545 ARHGAP26Q9UNA1 814 aa9□□□□□ -0.97
AC055716.2-201ENST00000552545 H7C0C1 242 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 CNTN5O94779 1100 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 RHOXF2BP0C7M4 288 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 ZFXP17010 805 aaPredicted RBP8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 PFKLP17858 780 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 LTBRP36941 435 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 VIPR2P41587 438 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 ATP5OP48047 213 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 IRAK1P51617 712 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 SATB1Q01826 763 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 GBE1Q04446 702 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 SEMA3BQ13214 749 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 TAZQ16635 292 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 ADGRF1Q5T601 910 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 NCBP2-AS2Q69YL0 99 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 TPGS1Q6ZTW0 290 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 GSTA5Q7RTV2 222 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 ZNF354CQ86Y25 554 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 BBS7Q8IWZ6 715 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 NPAS3Q8IXF0 933 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 ACTL9Q8TC94 416 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 PABPC5Q96DU9 382 aaKnown RBP8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 MYEOVQ96EZ4 313 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 CELF6Q96J87 481 aaKnown RBP8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 RIPOR3Q96MK2 946 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 DDX50Q9BQ39 737 aaKnown RBP8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 RHOXF2Q9BQY4 288 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 ZYG11BQ9C0D3 744 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 CATSPERBQ9H7T0 1116 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 RCOR3Q9P2K3 495 aaPredicted RBP8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 ZNF148Q9UQR1 794 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 EFR3BQ9Y2G0 817 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 ZFP37Q9Y6Q3 630 aaPredicted RBP8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 EYSQ5T1H1 3165 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 CCDC188H7C350 402 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 APOC4-APOC2K7ER74 178 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 PHF2O75151 1096 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 APOC2P02655 101 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 FOSL2P15408 326 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 HCAR3P49019 387 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 EIF3EP60228 445 aaKnown RBP8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 RPS24P62847 133 aaKnown RBP8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 MTA1Q13330 715 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 DPYSQ14117 519 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 SIX1Q15475 284 aaPredicted RBP8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 CTC1Q2NKJ3 1217 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 ALFQ53S48 1182 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 FAM133BQ5BKY9 247 aaKnown RBP8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 CCDC137Q6PK04 289 aaKnown RBP8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 DDX42Q86XP3 938 aaKnown RBP eCLIP8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 TTC13Q8NBP0 860 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 CCNYQ8ND76 341 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 FAF2Q96CS3 445 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 RPGRIP1Q96KN7 1286 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 PRMT1Q99873 361 aaKnown RBP8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 S1PR5Q9H228 398 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 WDR70Q9NW82 654 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 AMACRQ9UHK6 382 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 DNPEPQ9ULA0 475 aa8.99□□□□□ -0.97
AC055716.2-201ENST00000552545 NUP210Q8TEM1 1887 aaPredicted RBP8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 XIRP2A4UGR9 3374 aa8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 TYW5A2RUC4 315 aaKnown RBP8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 DFFAO00273 331 aa8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 MCF2LO15068 1137 aa8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 MFSD11O43934 449 aa8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 POU3F3P20264 500 aaPredicted RBP8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 TGM2P21980 687 aa8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 KCNA5P22460 613 aa8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 SGSHP51688 502 aa8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 ZNF135P52742 658 aaPredicted RBP8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 SLC10A2Q12908 348 aaPredicted RBP8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 BYSLQ13895 437 aaKnown RBP8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 FAM78AQ5JUQ0 283 aa8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 RABGAP1LQ5R372 815 aa8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 FAM182AQ5T1J6 154 aa8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 SLC9A4Q6AI14 798 aa8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 C8orf74Q6P047 294 aa8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 DARS2Q6PI48 645 aaKnown RBP8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 HTR3DQ70Z44 454 aa8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 VSIG1Q86XK7 387 aa8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 TP53INP2Q8IXH6 220 aa8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 CELF5Q8N6W0 485 aaKnown RBP8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 DDI1Q8WTU0 396 aa8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 TMA16Q96EY4 203 aaKnown RBP8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 LRRC1Q9BTT6 524 aa8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 PLK2Q9NYY3 685 aa8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 ZMYM5Q9UJ78 669 aa8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 ZNF510Q9Y2H8 683 aa8.98□□□□□ -0.97
AC055716.2-201ENST00000552545 E2F8A0AVK6 867 aa8.97□□□□□ -0.97
AC055716.2-201ENST00000552545 ZNF487B1APH4 448 aa8.97□□□□□ -0.97
AC055716.2-201ENST00000552545 DCLK1O15075 740 aa8.97□□□□□ -0.97
AC055716.2-201ENST00000552545 FGF10O15520 208 aaPredicted RBP8.97□□□□□ -0.97
AC055716.2-201ENST00000552545 TBL1XO60907 577 aa8.97□□□□□ -0.97
AC055716.2-201ENST00000552545 OR1E1P30953 314 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms