RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 CCDC33Q8N5R6 958 aa13.06□□□□□ -0.32
CACNB3-223ENST00000552480 CCNYQ8ND76 341 aa13.06□□□□□ -0.32
CACNB3-223ENST00000552480 SPPL3Q8TCT6 385 aa13.06□□□□□ -0.32
CACNB3-223ENST00000552480 LRRN4Q8WUT4 740 aa13.06□□□□□ -0.32
CACNB3-223ENST00000552480 POF1BQ8WVV4 589 aa13.06□□□□□ -0.32
CACNB3-223ENST00000552480 DPF3Q92784 378 aa13.06□□□□□ -0.32
CACNB3-223ENST00000552480 PLD4Q96BZ4 506 aa13.06□□□□□ -0.32
CACNB3-223ENST00000552480 HDAC11Q96DB2 347 aa13.06□□□□□ -0.32
CACNB3-223ENST00000552480 SPATA13Q96N96 652 aa13.06□□□□□ -0.32
CACNB3-223ENST00000552480 SH3GL2Q99962 352 aa13.06□□□□□ -0.32
CACNB3-223ENST00000552480 NACA2Q9H009 215 aa13.06□□□□□ -0.32
CACNB3-223ENST00000552480 KLC2Q9H0B6 622 aa13.06□□□□□ -0.32
CACNB3-223ENST00000552480 EPB41L4BQ9H329 900 aa13.06□□□□□ -0.32
CACNB3-223ENST00000552480 CDC42EP4Q9H3Q1 356 aaKnown RBP13.06□□□□□ -0.32
CACNB3-223ENST00000552480 ALG13Q9NP73 1137 aaKnown RBP13.06□□□□□ -0.32
CACNB3-223ENST00000552480 TLR9Q9NR96 1032 aa13.06□□□□□ -0.32
CACNB3-223ENST00000552480 NFS1Q9Y697 457 aa13.06□□□□□ -0.32
CACNB3-223ENST00000552480 IGLV3-10A0A075B6K4 115 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 C2orf71A6NGG8 1288 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 EIF3HO15372 352 aaKnown RBP eCLIP13.05□□□□□ -0.32
CACNB3-223ENST00000552480 MTSS1O43312 755 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 RIPK2O43353 540 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 LPXNO60711 386 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 OPHN1O60890 802 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 SYF2O95926 243 aaKnown RBP13.05□□□□□ -0.32
CACNB3-223ENST00000552480 GLUD1P00367 558 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 OAS1P00973 400 aaKnown RBP13.05□□□□□ -0.32
CACNB3-223ENST00000552480 LRG1P02750 347 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 F11P03951 625 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 SPATA31D3P0C874 917 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 RHOQP17081 205 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 OAS2P29728 719 aaKnown RBP13.05□□□□□ -0.32
CACNB3-223ENST00000552480 FDFT1P37268 417 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 GARSP41250 739 aaKnown RBP13.05□□□□□ -0.32
CACNB3-223ENST00000552480 MAGEA6P43360 314 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 EIF3BP55884 814 aaKnown RBP13.05□□□□□ -0.32
CACNB3-223ENST00000552480 ZNF33AQ06730 810 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 AUHQ13825 339 aaKnown RBP13.05□□□□□ -0.32
CACNB3-223ENST00000552480 PABPC1LQ4VXU2 614 aaKnown RBP13.05□□□□□ -0.32
CACNB3-223ENST00000552480 ANKRD20A2Q5SQ80 823 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 ANKRD20A1Q5TYW2 823 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 ANKRD20A3Q5VUR7 823 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 ANKRD22Q5VYY1 191 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 DENND2CQ68D51 928 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 PPP1R21Q6ZMI0 780 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 ARHGEF18Q6ZSZ5 1173 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 SPATA31D4Q6ZUB0 917 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 NLRP14Q86W24 1093 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 ARHGAP12Q8IWW6 846 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 TP53INP2Q8IXH6 220 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 RTL3Q8N8U3 475 aaKnown RBP13.05□□□□□ -0.32
CACNB3-223ENST00000552480 MRPL43Q8N983 215 aaKnown RBP13.05□□□□□ -0.32
CACNB3-223ENST00000552480 NETO2Q8NC67 525 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 KREMEN2Q8NCW0 462 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 CCDC110Q8TBZ0 833 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 P2RY11Q96G91 374 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 SAMD11Q96NU1 681 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 RBM15Q96T37 977 aaKnown RBP eCLIP13.05□□□□□ -0.32
CACNB3-223ENST00000552480 PRMT1Q99873 361 aaKnown RBP13.05□□□□□ -0.32
CACNB3-223ENST00000552480 C17orf80Q9BSJ5 609 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 ZYG11BQ9C0D3 744 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 SEMA4AQ9H3S1 761 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 ZNF334Q9HCZ1 680 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-223ENST00000552480 RAB6BQ9NRW1 208 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 DONSONQ9NYP3 566 aa13.05□□□□□ -0.32
CACNB3-223ENST00000552480 DRGXA6NNA5 263 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 RNF103O00237 685 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 ACSL4O60488 711 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 TMEM63AO94886 807 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 C1RP00736 705 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 C8AP07357 584 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 TPSB2P20231 275 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 TACR2P21452 398 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 DNAJB1P25685 340 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 HARS2P49590 506 aaKnown RBP13.04□□□□□ -0.32
CACNB3-223ENST00000552480 KCNQ1P51787 676 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 ARL4CP56559 192 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 WASHC5Q12768 1159 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 TPSAB1Q15661 275 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 AFMIDQ63HM1 303 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 RAP1GAP2Q684P5 730 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 CENPUQ71F23 418 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 RTL10Q7L3V2 364 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 TMEM150AQ86TG1 271 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 CHSY1Q86X52 802 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 CCDC13Q8IYE1 715 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 ELMOD1Q8N336 334 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 TAB3Q8N5C8 712 aaPredicted RBP13.04□□□□□ -0.32
CACNB3-223ENST00000552480 GOLGA6L1Q8N7Z2 621 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 EXOC4Q96A65 974 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 AZIN2Q96A70 460 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 CELF6Q96J87 481 aaKnown RBP13.04□□□□□ -0.32
CACNB3-223ENST00000552480 PKNOX2Q96KN3 472 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 PWWP2AQ96N64 755 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 KLF16Q9BXK1 252 aaPredicted RBP13.04□□□□□ -0.32
CACNB3-223ENST00000552480 FRMD8Q9BZ67 464 aaPredicted RBP13.04□□□□□ -0.32
CACNB3-223ENST00000552480 IL21Q9HBE4 155 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 SAYSD1Q9NPB0 183 aa13.04□□□□□ -0.32
CACNB3-223ENST00000552480 DNAJC17Q9NVM6 304 aaKnown RBP13.04□□□□□ -0.32
CACNB3-223ENST00000552480 TMEM248Q9NWD8 314 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms