RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 PHTF1Q9UMS5 762 aa14.41□□□□□ -0.1
RAB3IP-216ENST00000552199 MTSS1O43312 755 aa14.4□□□□□ -0.1
RAB3IP-216ENST00000552199 LPXNO60711 386 aa14.4□□□□□ -0.1
RAB3IP-216ENST00000552199 EDF1O60869 148 aaKnown RBP14.4□□□□□ -0.1
RAB3IP-216ENST00000552199 OAZ2O95190 189 aa14.4□□□□□ -0.1
RAB3IP-216ENST00000552199 CSH1P0DML2 217 aa14.4□□□□□ -0.1
RAB3IP-216ENST00000552199 CSH2P0DML3 217 aa14.4□□□□□ -0.1
RAB3IP-216ENST00000552199 SERPINB6P35237 376 aa14.4□□□□□ -0.1
RAB3IP-216ENST00000552199 OR1G1P47890 313 aa14.4□□□□□ -0.1
RAB3IP-216ENST00000552199 BTBD8Q5XKL5 378 aa14.4□□□□□ -0.1
RAB3IP-216ENST00000552199 CCNJLQ8IV13 435 aa14.4□□□□□ -0.1
RAB3IP-216ENST00000552199 ZNF276Q8N554 614 aa14.4□□□□□ -0.1
RAB3IP-216ENST00000552199 APBB2Q92870 758 aa14.4□□□□□ -0.1
RAB3IP-216ENST00000552199 OXNAD1Q96HP4 312 aaPredicted RBP14.4□□□□□ -0.1
RAB3IP-216ENST00000552199 ZCWPW1Q9H0M4 648 aa14.4□□□□□ -0.1
RAB3IP-216ENST00000552199 C12orf65Q9H3J6 166 aaKnown RBP14.4□□□□□ -0.1
RAB3IP-216ENST00000552199 STARD7Q9NQZ5 370 aa14.4□□□□□ -0.1
RAB3IP-216ENST00000552199 TBC1D13Q9NVG8 400 aa14.4□□□□□ -0.1
RAB3IP-216ENST00000552199 ARHGEF38Q9NXL2 777 aa14.4□□□□□ -0.1
RAB3IP-216ENST00000552199 IRAK2O43187 625 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 UGT1A9O60656 530 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 KRT38O76015 456 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 ALDH1A2O94788 518 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 INHAP05111 366 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 GSTA1P08263 222 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 OR4Q2P0C623 313 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 MGAT1P26572 445 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 GARSP41250 739 aaKnown RBP14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 SESN2P58004 480 aaPredicted RBP14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 SLC39A12Q504Y0 691 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 BRMS1LQ5PSV4 323 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 SCD5Q86SK9 330 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 DCP1BQ8IZD4 617 aaKnown RBP14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 ARNTL2Q8WYA1 636 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 MTBPQ96DY7 904 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 FTHL17Q9BXU8 183 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 VPS11Q9H270 941 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 UGT1A7Q9HAW7 530 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 UGT1A10Q9HAW8 530 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 UGT1A8Q9HAW9 530 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 SLCO1B3Q9NPD5 702 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 CREBZFQ9NS37 354 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 NUP205Q92621 2012 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 ARVCFO00192 962 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 PGFP49763 221 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 SERPINB9P50453 376 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 CRADDP78560 199 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 RNF43Q68DV7 783 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 CASC4Q6P4E1 433 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 SCN4BQ8IWT1 228 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 DEPDC1BQ8WUY9 529 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 HAPLN3Q96S86 360 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 GORASP1Q9BQQ3 440 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 NAT9Q9BTE0 207 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 SMOC2Q9H3U7 446 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 HMX1Q9NP08 348 aaPredicted RBP14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 HAUS2Q9NVX0 235 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 KLHL14Q9P2G3 628 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 DNAJB4Q9UDY4 337 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 TRHDEQ9UKU6 1024 aa14.39□□□□□ -0.11
RAB3IP-216ENST00000552199 H0YHG0 523 aa14.38□□□□□ -0.11
RAB3IP-216ENST00000552199 ZBTB24O43167 697 aaPredicted RBP14.38□□□□□ -0.11
RAB3IP-216ENST00000552199 RFPL1O75677 317 aa14.38□□□□□ -0.11
RAB3IP-216ENST00000552199 GNRH1P01148 92 aa14.38□□□□□ -0.11
RAB3IP-216ENST00000552199 DHRS4L1P0CG22 281 aa14.38□□□□□ -0.11
RAB3IP-216ENST00000552199 COL6A1P12109 1028 aa14.38□□□□□ -0.11
RAB3IP-216ENST00000552199 PGAM1P18669 254 aa14.38□□□□□ -0.11
RAB3IP-216ENST00000552199 ETV4P43268 484 aa14.38□□□□□ -0.11
RAB3IP-216ENST00000552199 CCDC63Q8NA47 563 aa14.38□□□□□ -0.11
RAB3IP-216ENST00000552199 TTC17Q96AE7 1141 aa14.38□□□□□ -0.11
RAB3IP-216ENST00000552199 FAM193BQ96PV7 902 aaPredicted RBP14.38□□□□□ -0.11
RAB3IP-216ENST00000552199 PIH1D1Q9NWS0 290 aaKnown RBP14.38□□□□□ -0.11
RAB3IP-216ENST00000552199 TMEM161AQ9NX61 479 aa14.38□□□□□ -0.11
RAB3IP-216ENST00000552199 ABI2Q9NYB9 513 aaPredicted RBP14.38□□□□□ -0.11
RAB3IP-216ENST00000552199 SLC12A4Q9UP95 1085 aa14.38□□□□□ -0.11
RAB3IP-216ENST00000552199 PRG3Q9Y2Y8 225 aaPredicted RBP14.38□□□□□ -0.11
RAB3IP-216ENST00000552199 SHROOM3Q8TF72 1996 aa14.38□□□□□ -0.11
RAB3IP-216ENST00000552199 WDR91A4D1P6 747 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 COPEO14579 308 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 TADA2AO75478 443 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 AP2A1O95782 977 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 SRGAP2BP0DMP2 458 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 CD68P34810 354 aaPredicted RBP14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 CCNFP41002 786 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 MGAT5Q09328 741 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 ZBTB17Q13105 803 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 GALNTL6Q49A17 601 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 TEX44Q53QW1 395 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 LRRC8DQ7L1W4 858 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 CHSY1Q86X52 802 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 CASP10Q92851 521 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 FUBP3Q96I24 572 aaKnown RBP eCLIP14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 VAT1Q99536 393 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 SIK2Q9H0K1 926 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 GBA3Q9H227 469 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 NMUR1Q9HB89 426 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 SYBUQ9NX95 663 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 SFMBT1Q9UHJ3 866 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 NEU3Q9UQ49 428 aa14.37□□□□□ -0.11
RAB3IP-216ENST00000552199 MYO16Q9Y6X6 1858 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms