RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 KLHDC7BQ96G42 594 aa12.99□□□□□ -0.33
SNRPF-204ENST00000552085 SMARCD1Q96GM5 515 aa12.99□□□□□ -0.33
SNRPF-204ENST00000552085 LLPHQ9BRT6 129 aaKnown RBP12.99□□□□□ -0.33
SNRPF-204ENST00000552085 DUSP23Q9BVJ7 150 aa12.99□□□□□ -0.33
SNRPF-204ENST00000552085 ST6GALNAC4Q9H4F1 302 aa12.99□□□□□ -0.33
SNRPF-204ENST00000552085 INTS13Q9NVM9 706 aa12.99□□□□□ -0.33
SNRPF-204ENST00000552085 KLHL11Q9NVR0 708 aa12.99□□□□□ -0.33
SNRPF-204ENST00000552085 ARHGAP20Q9P2F6 1191 aa12.99□□□□□ -0.33
SNRPF-204ENST00000552085 AGO1Q9UL18 857 aaKnown RBP12.99□□□□□ -0.33
SNRPF-204ENST00000552085 DMTF1Q9Y222 760 aa12.99□□□□□ -0.33
SNRPF-204ENST00000552085 CPED1A4D0V7 1026 aa12.98□□□□□ -0.33
SNRPF-204ENST00000552085 K7ESM1 405 aa12.98□□□□□ -0.33
SNRPF-204ENST00000552085 PLD2O14939 933 aa12.98□□□□□ -0.33
SNRPF-204ENST00000552085 MTSS1O43312 755 aa12.98□□□□□ -0.33
SNRPF-204ENST00000552085 SIN3BO75182 1162 aa12.98□□□□□ -0.33
SNRPF-204ENST00000552085 AP1G2O75843 785 aa12.98□□□□□ -0.33
SNRPF-204ENST00000552085 TNNC2P02585 160 aa12.98□□□□□ -0.33
SNRPF-204ENST00000552085 ATP5BP06576 529 aaKnown RBP12.98□□□□□ -0.33
SNRPF-204ENST00000552085 GOT1P17174 413 aa12.98□□□□□ -0.33
SNRPF-204ENST00000552085 COL8A1P27658 744 aa12.98□□□□□ -0.33
SNRPF-204ENST00000552085 SLC8A1P32418 973 aa12.98□□□□□ -0.33
SNRPF-204ENST00000552085 NUDT1P36639 197 aa12.98□□□□□ -0.33
SNRPF-204ENST00000552085 TOB1P50616 345 aaPredicted RBP12.98□□□□□ -0.33
SNRPF-204ENST00000552085 MBLAC2Q68D91 279 aa12.98□□□□□ -0.33
SNRPF-204ENST00000552085 GUSBP11Q6P575 273 aa12.98□□□□□ -0.33
SNRPF-204ENST00000552085 CRTC1Q6UUV9 634 aa12.98□□□□□ -0.33
SNRPF-204ENST00000552085 EFL1Q7Z2Z2 1120 aaKnown RBP12.98□□□□□ -0.33
SNRPF-204ENST00000552085 GPBP1Q86WP2 473 aa12.98□□□□□ -0.33
SNRPF-204ENST00000552085 MMAAQ8IVH4 418 aaKnown RBP12.98□□□□□ -0.33
SNRPF-204ENST00000552085 ZC3H3Q8IXZ2 948 aaKnown RBP12.98□□□□□ -0.33
SNRPF-204ENST00000552085 AHI1Q8N157 1196 aa12.98□□□□□ -0.33
SNRPF-204ENST00000552085 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.98□□□□□ -0.33
SNRPF-204ENST00000552085 ZMIZ2Q8NF64 920 aa12.98□□□□□ -0.33
SNRPF-204ENST00000552085 OR5B17Q8NGF7 314 aa12.98□□□□□ -0.33
SNRPF-204ENST00000552085 NMUR1Q9HB89 426 aa12.98□□□□□ -0.33
SNRPF-204ENST00000552085 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.98□□□□□ -0.33
SNRPF-204ENST00000552085 SCML2Q9UQR0 700 aa12.98□□□□□ -0.33
SNRPF-204ENST00000552085 SCAMP1O15126 338 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 HMBSP08397 361 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 HOXD9P28356 352 aaPredicted RBP12.97□□□□□ -0.33
SNRPF-204ENST00000552085 MAT2AP31153 395 aaKnown RBP12.97□□□□□ -0.33
SNRPF-204ENST00000552085 UGT1A5P35504 534 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 PDX1P52945 283 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 COG7P83436 770 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 KCNMA1Q12791 1236 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 ZCCHC8Q6NZY4 707 aaKnown RBP12.97□□□□□ -0.33
SNRPF-204ENST00000552085 KIAA0907Q7Z7F0 614 aaPredicted RBP12.97□□□□□ -0.33
SNRPF-204ENST00000552085 TADA2BQ86TJ2 420 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 DENND1CQ8IV53 801 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 FBXO39Q8N4B4 442 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 AADATQ8N5Z0 425 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.97□□□□□ -0.33
SNRPF-204ENST00000552085 HVCN1Q96D96 273 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 CDK5RAP3Q96JB5 506 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 SMOQ99835 787 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 CAAP1Q9H8G2 361 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 KRT82Q9NSB4 513 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 ABCB8Q9NUT2 735 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 NCKIPSDQ9NZQ3 722 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 SEL1LQ9UBV2 794 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 CYTH4Q9UIA0 394 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 GGA2Q9UJY4 613 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 CELSR2Q9HCU4 2923 aa12.97□□□□□ -0.33
SNRPF-204ENST00000552085 UBE4BO95155 1302 aa12.96□□□□□ -0.33
SNRPF-204ENST00000552085 A0A1W2PQH9 124 aa12.96□□□□□ -0.33
SNRPF-204ENST00000552085 SLC12A8A0AV02 714 aa12.96□□□□□ -0.33
SNRPF-204ENST00000552085 EME2A4GXA9 379 aaPredicted RBP12.96□□□□□ -0.33
SNRPF-204ENST00000552085 GOLGA8IPA6NC78 632 aa12.96□□□□□ -0.33
SNRPF-204ENST00000552085 GOLGA8JA6NMD2 632 aa12.96□□□□□ -0.33
SNRPF-204ENST00000552085 PRAMEF26H0Y7S4 382 aa12.96□□□□□ -0.33
SNRPF-204ENST00000552085 RIOK3O14730 519 aaKnown RBP12.96□□□□□ -0.33
SNRPF-204ENST00000552085 SLC26A4O43511 780 aa12.96□□□□□ -0.33
SNRPF-204ENST00000552085 TBCAO75347 108 aaKnown RBP12.96□□□□□ -0.33
SNRPF-204ENST00000552085 BEST1O76090 585 aa12.96□□□□□ -0.33
SNRPF-204ENST00000552085 PRPF6O94906 941 aaKnown RBP12.96□□□□□ -0.33
SNRPF-204ENST00000552085 KRT18P05783 430 aaKnown RBP12.96□□□□□ -0.33
SNRPF-204ENST00000552085 PABPC1P11940 636 aaKnown RBP12.96□□□□□ -0.33
SNRPF-204ENST00000552085 UQCRFS1P47985 274 aa12.96□□□□□ -0.33
SNRPF-204ENST00000552085 NEK4P51957 841 aa12.96□□□□□ -0.33
SNRPF-204ENST00000552085 TNNC1P63316 161 aa12.96□□□□□ -0.33
SNRPF-204ENST00000552085 HMGN5P82970 282 aaKnown RBP12.96□□□□□ -0.33
SNRPF-204ENST00000552085 EIF3IQ13347 325 aaKnown RBP12.96□□□□□ -0.33
SNRPF-204ENST00000552085 DHX8Q14562 1220 aaKnown RBP12.96□□□□□ -0.33
SNRPF-204ENST00000552085 DUOXA2Q1HG44 320 aa12.96□□□□□ -0.33
SNRPF-204ENST00000552085 TMEM119Q4V9L6 283 aa12.96□□□□□ -0.33
SNRPF-204ENST00000552085 MPPE1Q53F39 396 aa12.96□□□□□ -0.33
SNRPF-204ENST00000552085 RAB11FIP2Q7L804 512 aa12.96□□□□□ -0.33
SNRPF-204ENST00000552085 DSG4Q86SJ6 1040 aa12.96□□□□□ -0.33
SNRPF-204ENST00000552085 FAM217AQ8IXS0 508 aa12.96□□□□□ -0.33
SNRPF-204ENST00000552085 WDR48Q8TAF3 677 aa12.96□□□□□ -0.33
SNRPF-204ENST00000552085 NOC3LQ8WTT2 800 aaKnown RBP12.96□□□□□ -0.33
SNRPF-204ENST00000552085 SLC12A9Q9BXP2 914 aa12.96□□□□□ -0.33
SNRPF-204ENST00000552085 ZNF71Q9NQZ8 489 aaPredicted RBP12.96□□□□□ -0.33
SNRPF-204ENST00000552085 CA5BQ9Y2D0 317 aa12.96□□□□□ -0.33
SNRPF-204ENST00000552085 CRYBG3Q68DQ2 2970 aa12.96□□□□□ -0.34
SNRPF-204ENST00000552085 NVLO15381 856 aaKnown RBP12.95□□□□□ -0.34
SNRPF-204ENST00000552085 NEBLO76041 1014 aa12.95□□□□□ -0.34
SNRPF-204ENST00000552085 RNF224P0DH78 156 aa12.95□□□□□ -0.34
SNRPF-204ENST00000552085 POLR2EP19388 210 aaKnown RBP12.95□□□□□ -0.34
SNRPF-204ENST00000552085 C5AR1P21730 350 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms