RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 CYB5D2Q8WUJ1 264 aa19.63■□□□□ 0.73
DDX54-208ENST00000551344 PRDM16Q9HAZ2 1276 aa19.63■□□□□ 0.73
DDX54-208ENST00000551344 ARHGEF38Q9NXL2 777 aa19.63■□□□□ 0.73
DDX54-208ENST00000551344 DLL3Q9NYJ7 618 aa19.63■□□□□ 0.73
DDX54-208ENST00000551344 SUN2Q9UH99 717 aa19.63■□□□□ 0.73
DDX54-208ENST00000551344 MYO6Q9UM54 1294 aa19.63■□□□□ 0.73
DDX54-208ENST00000551344 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.63■□□□□ 0.73
DDX54-208ENST00000551344 GOLGA8SH3BPF8 625 aa19.62■□□□□ 0.73
DDX54-208ENST00000551344 PAGE1O75459 146 aa19.62■□□□□ 0.73
DDX54-208ENST00000551344 MOCS3O95396 460 aa19.62■□□□□ 0.73
DDX54-208ENST00000551344 ASLP04424 464 aa19.62■□□□□ 0.73
DDX54-208ENST00000551344 PRKCHP24723 683 aa19.62■□□□□ 0.73
DDX54-208ENST00000551344 DHPSP49366 369 aaPredicted RBP19.62■□□□□ 0.73
DDX54-208ENST00000551344 SULT1E1P49888 294 aa19.62■□□□□ 0.73
DDX54-208ENST00000551344 OXCT1P55809 520 aa19.62■□□□□ 0.73
DDX54-208ENST00000551344 DEUP1Q05D60 604 aa19.62■□□□□ 0.73
DDX54-208ENST00000551344 CAMK2GQ13555 558 aaPredicted RBP19.62■□□□□ 0.73
DDX54-208ENST00000551344 SLC12A1Q13621 1099 aa19.62■□□□□ 0.73
DDX54-208ENST00000551344 AUHQ13825 339 aaKnown RBP19.62■□□□□ 0.73
DDX54-208ENST00000551344 RSPO4Q2I0M5 234 aaPredicted RBP19.62■□□□□ 0.73
DDX54-208ENST00000551344 FNDC3BQ53EP0 1204 aaKnown RBP19.62■□□□□ 0.73
DDX54-208ENST00000551344 FSCBQ5H9T9 825 aa19.62■□□□□ 0.73
DDX54-208ENST00000551344 OTUD1Q5VV17 481 aaPredicted RBP19.62■□□□□ 0.73
DDX54-208ENST00000551344 FBXL22Q6P050 247 aa19.62■□□□□ 0.73
DDX54-208ENST00000551344 MMS22LQ6ZRQ5 1243 aa19.62■□□□□ 0.73
DDX54-208ENST00000551344 ERLEC1Q96DZ1 483 aa19.62■□□□□ 0.73
DDX54-208ENST00000551344 PCDHB18PQ96TA0 734 aa19.62■□□□□ 0.73
DDX54-208ENST00000551344 MKRN2Q9H000 416 aaKnown RBP19.62■□□□□ 0.73
DDX54-208ENST00000551344 ITM2CQ9NQX7 267 aa19.62■□□□□ 0.73
DDX54-208ENST00000551344 PIGVQ9NUD9 493 aa19.62■□□□□ 0.73
DDX54-208ENST00000551344 INTS6Q9UL03 887 aaKnown RBP19.62■□□□□ 0.73
DDX54-208ENST00000551344 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 IGHV1OR15-9A0A0B4J2B8 117 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 A0A1B0GTH6 734 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 A0A1B0GVM2 712 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 A0A1W2PQC6 194 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 TCAF2A6NFQ2 919 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 AP5Z1O43299 807 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 C7P10643 843 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 FERP16591 822 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 FLT3P36888 993 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 CSKP41240 450 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 DPP6P42658 865 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 SKOR2Q2VWA4 1001 aaPredicted RBP19.61■□□□□ 0.73
DDX54-208ENST00000551344 KIAA1324Q6UXG2 1013 aaKnown RBP19.61■□□□□ 0.73
DDX54-208ENST00000551344 TMEFF1Q8IYR6 380 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 CCAR2Q8N163 923 aaKnown RBP19.61■□□□□ 0.73
DDX54-208ENST00000551344 C12orf50Q8NA57 414 aaPredicted RBP19.61■□□□□ 0.73
DDX54-208ENST00000551344 KDM1BQ8NB78 822 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 SLC30A5Q8TAD4 765 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 NETO1Q8TDF5 533 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 PRCCQ92733 491 aaPredicted RBP19.61■□□□□ 0.73
DDX54-208ENST00000551344 SIPA1Q96FS4 1042 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 C1orf74Q96LT6 269 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 RPRD1AQ96P16 312 aaPredicted RBP19.61■□□□□ 0.73
DDX54-208ENST00000551344 PPP1R9BQ96SB3 815 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 TBCBQ99426 244 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 AGPAT1Q99943 283 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 ADAM33Q9BZ11 813 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 TKTL2Q9H0I9 626 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 SLC6A17Q9H1V8 727 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 FBRSQ9HAH7 460 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 HS3ST4Q9Y661 456 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 THADAQ6YHU6 1953 aa19.61■□□□□ 0.73
DDX54-208ENST00000551344 ENDOD1O94919 500 aa19.6■□□□□ 0.73
DDX54-208ENST00000551344 ADCY5O95622 1261 aa19.6■□□□□ 0.73
DDX54-208ENST00000551344 HLA-EP13747 358 aa19.6■□□□□ 0.73
DDX54-208ENST00000551344 TFE3P19532 575 aaPredicted RBP19.6■□□□□ 0.73
DDX54-208ENST00000551344 NSFP46459 744 aaKnown RBP19.6■□□□□ 0.73
DDX54-208ENST00000551344 COPAP53621 1224 aa19.6■□□□□ 0.73
DDX54-208ENST00000551344 ST8SIA6P61647 398 aa19.6■□□□□ 0.73
DDX54-208ENST00000551344 TPM4P67936 248 aa19.6■□□□□ 0.73
DDX54-208ENST00000551344 RPL6Q02878 288 aaKnown RBP19.6■□□□□ 0.73
DDX54-208ENST00000551344 CENPCQ03188 943 aa19.6■□□□□ 0.73
DDX54-208ENST00000551344 NR1I3Q14994 352 aa19.6■□□□□ 0.73
DDX54-208ENST00000551344 CCDC6Q16204 474 aa19.6■□□□□ 0.73
DDX54-208ENST00000551344 CLEC16AQ2KHT3 1053 aa19.6■□□□□ 0.73
DDX54-208ENST00000551344 C5orf22Q49AR2 442 aa19.6■□□□□ 0.73
DDX54-208ENST00000551344 PITRM1Q5JRX3 1037 aa19.6■□□□□ 0.73
DDX54-208ENST00000551344 CYP2U1Q7Z449 544 aa19.6■□□□□ 0.73
DDX54-208ENST00000551344 BNIPLQ7Z465 357 aa19.6■□□□□ 0.73
DDX54-208ENST00000551344 PHF13Q86YI8 300 aaPredicted RBP19.6■□□□□ 0.73
DDX54-208ENST00000551344 OR2T3Q8NH03 318 aa19.6■□□□□ 0.73
DDX54-208ENST00000551344 NAP1L5Q96NT1 182 aaPredicted RBP19.6■□□□□ 0.73
DDX54-208ENST00000551344 SIK2Q9H0K1 926 aa19.6■□□□□ 0.73
DDX54-208ENST00000551344 ADAM22Q9P0K1 906 aa19.6■□□□□ 0.73
DDX54-208ENST00000551344 CDV3Q9UKY7 258 aaKnown RBP19.6■□□□□ 0.73
DDX54-208ENST00000551344 VANGL2Q9ULK5 521 aa19.6■□□□□ 0.73
DDX54-208ENST00000551344 CYP8B1Q9UNU6 501 aa19.6■□□□□ 0.73
DDX54-208ENST00000551344 GON4LQ3T8J9 2241 aa19.59■□□□□ 0.73
DDX54-208ENST00000551344 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.59■□□□□ 0.73
DDX54-208ENST00000551344 FAM170AA1A519 330 aa19.59■□□□□ 0.73
DDX54-208ENST00000551344 SERPINC1P01008 464 aa19.59■□□□□ 0.73
DDX54-208ENST00000551344 SRPRAP08240 638 aaKnown RBP19.59■□□□□ 0.73
DDX54-208ENST00000551344 OXTRP30559 389 aa19.59■□□□□ 0.73
DDX54-208ENST00000551344 PLK1P53350 603 aa19.59■□□□□ 0.73
DDX54-208ENST00000551344 GSCP56915 257 aaPredicted RBP19.59■□□□□ 0.73
DDX54-208ENST00000551344 PTP4A2Q12974 167 aa19.59■□□□□ 0.73
DDX54-208ENST00000551344 ARID5BQ14865 1188 aa19.59■□□□□ 0.73
DDX54-208ENST00000551344 SF3A2Q15428 464 aaKnown RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms