RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 ZNF419Q96HQ0 510 aaPredicted RBP13.49□□□□□ -0.25
NPAS3-209ENST00000551008 HSPA12BQ96MM6 686 aa13.49□□□□□ -0.25
NPAS3-209ENST00000551008 CAPN10Q9HC96 672 aa13.49□□□□□ -0.25
NPAS3-209ENST00000551008 PRSS16Q9NQE7 514 aa13.49□□□□□ -0.25
NPAS3-209ENST00000551008 DDIT4Q9NX09 232 aa13.49□□□□□ -0.25
NPAS3-209ENST00000551008 SLCO1B1Q9Y6L6 691 aa13.49□□□□□ -0.25
NPAS3-209ENST00000551008 CABIN1Q9Y6J0 2220 aa13.49□□□□□ -0.25
NPAS3-209ENST00000551008 EPG5Q9HCE0 2579 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 CAPN9O14815 690 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 KHNYNO15037 678 aaKnown RBP13.48□□□□□ -0.25
NPAS3-209ENST00000551008 AP5Z1O43299 807 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 MMEP08473 750 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 ADRB1P08588 477 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 DLDP09622 509 aaKnown RBP13.48□□□□□ -0.25
NPAS3-209ENST00000551008 CD6P30203 668 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 KRT9P35527 623 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 NOMO3P69849 1222 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 SLC6A3Q01959 620 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 CENPCQ03188 943 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 FNDC3BQ53EP0 1204 aaKnown RBP13.48□□□□□ -0.25
NPAS3-209ENST00000551008 EFHC1Q5JVL4 640 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 TAF3Q5VWG9 929 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 CXorf57Q6NSI4 855 aaKnown RBP13.48□□□□□ -0.25
NPAS3-209ENST00000551008 BNIPLQ7Z465 357 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 CHSY1Q86X52 802 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 XYLT1Q86Y38 959 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 APCDD1Q8J025 514 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 CARNMT1Q8N4J0 409 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 OR2T3Q8NH03 318 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 IGSF8Q969P0 613 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 NT5C3BQ969T7 300 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 ALG14Q96F25 216 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 TOE1Q96GM8 510 aaKnown RBP13.48□□□□□ -0.25
NPAS3-209ENST00000551008 BTN2A3PQ96KV6 586 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 GBP4Q96PP9 640 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 NPY6RQ99463 290 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 TRIM62Q9BVG3 475 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 STK33Q9BYT3 514 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 FAM204AQ9H8W3 233 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 PIGVQ9NUD9 493 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 TMEM63CQ9P1W3 806 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 CEP295Q9C0D2 2601 aa13.48□□□□□ -0.25
NPAS3-209ENST00000551008 SPEGQ15772 3267 aa13.47□□□□□ -0.25
NPAS3-209ENST00000551008 SYNJ2BP-COX16A0A087WUM0 186 aa13.47□□□□□ -0.25
NPAS3-209ENST00000551008 PES1O00541 588 aaKnown RBP13.47□□□□□ -0.25
NPAS3-209ENST00000551008 GIPC1O14908 333 aa13.47□□□□□ -0.25
NPAS3-209ENST00000551008 APOEP02649 317 aa13.47□□□□□ -0.25
NPAS3-209ENST00000551008 ENGP17813 658 aa13.47□□□□□ -0.25
NPAS3-209ENST00000551008 MAOBP27338 520 aa13.47□□□□□ -0.25
NPAS3-209ENST00000551008 HOXD12P35452 270 aa13.47□□□□□ -0.25
NPAS3-209ENST00000551008 FLT3P36888 993 aa13.47□□□□□ -0.25
NPAS3-209ENST00000551008 NUMBP49757 651 aa13.47□□□□□ -0.25
NPAS3-209ENST00000551008 COPB1P53618 953 aaKnown RBP13.47□□□□□ -0.25
NPAS3-209ENST00000551008 RPS14P62263 151 aaKnown RBP13.47□□□□□ -0.25
NPAS3-209ENST00000551008 CDK17Q00537 523 aa13.47□□□□□ -0.25
NPAS3-209ENST00000551008 PITRM1Q5JRX3 1037 aa13.47□□□□□ -0.25
NPAS3-209ENST00000551008 C14orf80Q86SX3 495 aa13.47□□□□□ -0.25
NPAS3-209ENST00000551008 ZNF683Q8IZ20 524 aa13.47□□□□□ -0.25
NPAS3-209ENST00000551008 OR2I1PQ8NGU4 316 aa13.47□□□□□ -0.25
NPAS3-209ENST00000551008 C1orf216Q8TAB5 229 aa13.47□□□□□ -0.25
NPAS3-209ENST00000551008 SIPA1Q96FS4 1042 aa13.47□□□□□ -0.25
NPAS3-209ENST00000551008 DDX50Q9BQ39 737 aaKnown RBP13.47□□□□□ -0.25
NPAS3-209ENST00000551008 TMPRSS4Q9NRS4 437 aa13.47□□□□□ -0.25
NPAS3-209ENST00000551008 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.47□□□□□ -0.25
NPAS3-209ENST00000551008 COX16Q9P0S2 106 aa13.47□□□□□ -0.25
NPAS3-209ENST00000551008 LIMA1Q9UHB6 759 aaKnown RBP13.47□□□□□ -0.25
NPAS3-209ENST00000551008 ITIH6Q6UXX5 1313 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 C10orf142B7Z368 130 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 SYNCRIPO60506 623 aaKnown RBP13.46□□□□□ -0.25
NPAS3-209ENST00000551008 ADCY5O95622 1261 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 POLR2EP19388 210 aaKnown RBP13.46□□□□□ -0.25
NPAS3-209ENST00000551008 MZF1P28698 734 aaPredicted RBP13.46□□□□□ -0.25
NPAS3-209ENST00000551008 NOS2P35228 1153 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 MATKP42679 507 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 STK19P49842 368 aaPredicted RBP13.46□□□□□ -0.25
NPAS3-209ENST00000551008 BPIFB4P59827 614 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 POLR2FP61218 127 aaKnown RBP13.46□□□□□ -0.25
NPAS3-209ENST00000551008 FMO1Q01740 532 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 PLEKHG6Q3KR16 790 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 RAB6CQ53S08 254 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 IL31Q6EBC2 164 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 FBXL22Q6P050 247 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 CCAR2Q8N163 923 aaKnown RBP13.46□□□□□ -0.25
NPAS3-209ENST00000551008 ATP6V0D2Q8N8Y2 350 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 TMEM35BQ8NCS4 154 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 DNASE2BQ8WZ79 361 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 PRCCQ92733 491 aaPredicted RBP13.46□□□□□ -0.25
NPAS3-209ENST00000551008 TBCBQ99426 244 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 GPR174Q9BXC1 333 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 RAB6CQ9H0N0 254 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 TMEM9BQ9NQ34 198 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 FAM207AQ9NSI2 230 aaPredicted RBP13.46□□□□□ -0.25
NPAS3-209ENST00000551008 TMEM59LQ9UK28 342 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 OR51B4Q9Y5P0 310 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 SNX10Q9Y5X0 201 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 HS3ST4Q9Y661 456 aa13.46□□□□□ -0.25
NPAS3-209ENST00000551008 FRYQ5TBA9 3013 aa13.46□□□□□ -0.26
NPAS3-209ENST00000551008 LGALS16A8MUM7 142 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 TTC34A8MYJ7 566 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 F5H5T6 163 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms