RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 TEX19Q8NA77 164 aa11.78□□□□□ -0.52
GPN3-208ENST00000550974 WFIKKN2Q8TEU8 576 aa11.78□□□□□ -0.52
GPN3-208ENST00000550974 POMGNT1Q8WZA1 660 aa11.78□□□□□ -0.52
GPN3-208ENST00000550974 WASF1Q92558 559 aa11.78□□□□□ -0.52
GPN3-208ENST00000550974 KCNN1Q92952 543 aa11.78□□□□□ -0.52
GPN3-208ENST00000550974 KCNB2Q92953 911 aa11.78□□□□□ -0.52
GPN3-208ENST00000550974 MYOCQ99972 504 aa11.78□□□□□ -0.52
GPN3-208ENST00000550974 FAM213AQ9BRX8 229 aa11.78□□□□□ -0.52
GPN3-208ENST00000550974 MED10Q9BTT4 135 aa11.78□□□□□ -0.52
GPN3-208ENST00000550974 MTMR12Q9C0I1 747 aa11.78□□□□□ -0.52
GPN3-208ENST00000550974 IKZF4Q9H2S9 585 aa11.78□□□□□ -0.52
GPN3-208ENST00000550974 PREBQ9HCU5 417 aa11.78□□□□□ -0.52
GPN3-208ENST00000550974 COMMD8Q9NX08 183 aa11.78□□□□□ -0.52
GPN3-208ENST00000550974 DMTF1Q9Y222 760 aa11.78□□□□□ -0.52
GPN3-208ENST00000550974 SETD2Q9BYW2 2564 aaPredicted RBP11.78□□□□□ -0.52
GPN3-208ENST00000550974 F8P00451 2351 aa11.78□□□□□ -0.52
GPN3-208ENST00000550974 KIF26BQ2KJY2 2108 aa11.78□□□□□ -0.52
GPN3-208ENST00000550974 MED13Q9UHV7 2174 aa11.78□□□□□ -0.52
GPN3-208ENST00000550974 PRAMEF26H0Y7S4 382 aa11.77□□□□□ -0.53
GPN3-208ENST00000550974 MUSKO15146 869 aa11.77□□□□□ -0.53
GPN3-208ENST00000550974 ATP5BP06576 529 aaKnown RBP11.77□□□□□ -0.53
GPN3-208ENST00000550974 DLDP09622 509 aaKnown RBP11.77□□□□□ -0.53
GPN3-208ENST00000550974 ITIH1P19827 911 aa11.77□□□□□ -0.53
GPN3-208ENST00000550974 CORO1AP31146 461 aaKnown RBP11.77□□□□□ -0.53
GPN3-208ENST00000550974 PSMD8P48556 350 aa11.77□□□□□ -0.53
GPN3-208ENST00000550974 NR0B2Q15466 257 aa11.77□□□□□ -0.53
GPN3-208ENST00000550974 C10orf120Q5SQS8 335 aa11.77□□□□□ -0.53
GPN3-208ENST00000550974 MBLAC2Q68D91 279 aa11.77□□□□□ -0.53
GPN3-208ENST00000550974 DTX1Q86Y01 620 aa11.77□□□□□ -0.53
GPN3-208ENST00000550974 DENND1CQ8IV53 801 aa11.77□□□□□ -0.53
GPN3-208ENST00000550974 ZC3H3Q8IXZ2 948 aaKnown RBP11.77□□□□□ -0.53
GPN3-208ENST00000550974 SYT2Q8N9I0 419 aaPredicted RBP11.77□□□□□ -0.53
GPN3-208ENST00000550974 B3GALNT2Q8NCR0 500 aa11.77□□□□□ -0.53
GPN3-208ENST00000550974 CALN1Q9BXU9 219 aa11.77□□□□□ -0.53
GPN3-208ENST00000550974 FOXP3Q9BZS1 431 aa11.77□□□□□ -0.53
GPN3-208ENST00000550974 STRADBQ9C0K7 418 aa11.77□□□□□ -0.53
GPN3-208ENST00000550974 DMAP1Q9NPF5 467 aaPredicted RBP11.77□□□□□ -0.53
GPN3-208ENST00000550974 ABCB8Q9NUT2 735 aa11.77□□□□□ -0.53
GPN3-208ENST00000550974 NCKIPSDQ9NZQ3 722 aa11.77□□□□□ -0.53
GPN3-208ENST00000550974 FOXJ2Q9P0K8 574 aa11.77□□□□□ -0.53
GPN3-208ENST00000550974 CYTH4Q9UIA0 394 aa11.77□□□□□ -0.53
GPN3-208ENST00000550974 AGO1Q9UL18 857 aaKnown RBP11.77□□□□□ -0.53
GPN3-208ENST00000550974 A8MXQ7 604 aa11.76□□□□□ -0.53
GPN3-208ENST00000550974 TMEM191BP0C7N4 346 aa11.76□□□□□ -0.53
GPN3-208ENST00000550974 SLC6A4P31645 630 aa11.76□□□□□ -0.53
GPN3-208ENST00000550974 GNL2Q13823 731 aaKnown RBP11.76□□□□□ -0.53
GPN3-208ENST00000550974 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.76□□□□□ -0.53
GPN3-208ENST00000550974 RUFY3Q7L099 469 aa11.76□□□□□ -0.53
GPN3-208ENST00000550974 FAM35AQ86V20 835 aa11.76□□□□□ -0.53
GPN3-208ENST00000550974 AHI1Q8N157 1196 aa11.76□□□□□ -0.53
GPN3-208ENST00000550974 WDR48Q8TAF3 677 aa11.76□□□□□ -0.53
GPN3-208ENST00000550974 PDCD6IPQ8WUM4 868 aaKnown RBP11.76□□□□□ -0.53
GPN3-208ENST00000550974 PLIN2Q99541 437 aa11.76□□□□□ -0.53
GPN3-208ENST00000550974 CCDC3Q9BQI4 270 aa11.76□□□□□ -0.53
GPN3-208ENST00000550974 ZHX3Q9H4I2 956 aa11.76□□□□□ -0.53
GPN3-208ENST00000550974 FBXO44Q9H4M3 255 aa11.76□□□□□ -0.53
GPN3-208ENST00000550974 DNAJC28Q9NX36 388 aa11.76□□□□□ -0.53
GPN3-208ENST00000550974 GGA2Q9UJY4 613 aa11.76□□□□□ -0.53
GPN3-208ENST00000550974 ITGB1BP2Q9UKP3 347 aa11.76□□□□□ -0.53
GPN3-208ENST00000550974 STYXL1Q9Y6J8 313 aa11.76□□□□□ -0.53
GPN3-208ENST00000550974 UBE4BO95155 1302 aa11.76□□□□□ -0.53
GPN3-208ENST00000550974 POLR2EP19388 210 aaKnown RBP11.75□□□□□ -0.53
GPN3-208ENST00000550974 NR1D1P20393 614 aa11.75□□□□□ -0.53
GPN3-208ENST00000550974 SCP2P22307 547 aa11.75□□□□□ -0.53
GPN3-208ENST00000550974 HOXD9P28356 352 aaPredicted RBP11.75□□□□□ -0.53
GPN3-208ENST00000550974 SLC12A3P55017 1021 aa11.75□□□□□ -0.53
GPN3-208ENST00000550974 ST8SIA6P61647 398 aa11.75□□□□□ -0.53
GPN3-208ENST00000550974 PDE4CQ08493 712 aa11.75□□□□□ -0.53
GPN3-208ENST00000550974 EIF2S3LQ2VIR3 472 aaKnown RBP11.75□□□□□ -0.53
GPN3-208ENST00000550974 DEFB133Q30KQ1 61 aa11.75□□□□□ -0.53
GPN3-208ENST00000550974 KLHDC10Q6PID8 442 aa11.75□□□□□ -0.53
GPN3-208ENST00000550974 BRSK2Q8IWQ3 736 aa11.75□□□□□ -0.53
GPN3-208ENST00000550974 ZSWIM2Q8NEG5 633 aa11.75□□□□□ -0.53
GPN3-208ENST00000550974 NANOS1Q8WY41 292 aaKnown RBP11.75□□□□□ -0.53
GPN3-208ENST00000550974 USP7Q93009 1102 aa11.75□□□□□ -0.53
GPN3-208ENST00000550974 MARVELD3Q96A59 401 aa11.75□□□□□ -0.53
GPN3-208ENST00000550974 SAAL1Q96ER3 474 aa11.75□□□□□ -0.53
GPN3-208ENST00000550974 HEXIM2Q96MH2 286 aaKnown RBP11.75□□□□□ -0.53
GPN3-208ENST00000550974 CATSPER2Q96P56 530 aa11.75□□□□□ -0.53
GPN3-208ENST00000550974 RAB34Q9BZG1 259 aa11.75□□□□□ -0.53
GPN3-208ENST00000550974 NMUR1Q9HB89 426 aa11.75□□□□□ -0.53
GPN3-208ENST00000550974 RBAKQ9NYW8 714 aaPredicted RBP11.75□□□□□ -0.53
GPN3-208ENST00000550974 RASAL2Q9UJF2 1139 aa11.75□□□□□ -0.53
GPN3-208ENST00000550974 TP53TG5Q9Y2B4 290 aa11.75□□□□□ -0.53
GPN3-208ENST00000550974 LOXL2Q9Y4K0 774 aa11.75□□□□□ -0.53
GPN3-208ENST00000550974 ATP8B3O60423 1300 aa11.75□□□□□ -0.53
GPN3-208ENST00000550974 CRYBG3Q68DQ2 2970 aa11.74□□□□□ -0.53
GPN3-208ENST00000550974 A0A1W2PQ27 194 aa11.74□□□□□ -0.53
GPN3-208ENST00000550974 A0A1W2PQ64 194 aa11.74□□□□□ -0.53
GPN3-208ENST00000550974 A0A1W2PQC6 194 aa11.74□□□□□ -0.53
GPN3-208ENST00000550974 A0A1W2PQH9 124 aa11.74□□□□□ -0.53
GPN3-208ENST00000550974 ARHGAP10A1A4S6 786 aa11.74□□□□□ -0.53
GPN3-208ENST00000550974 TTLL8A6PVC2 850 aa11.74□□□□□ -0.53
GPN3-208ENST00000550974 AP1G2O75843 785 aa11.74□□□□□ -0.53
GPN3-208ENST00000550974 FAM13AO94988 1023 aa11.74□□□□□ -0.53
GPN3-208ENST00000550974 CTDNEP1O95476 244 aa11.74□□□□□ -0.53
GPN3-208ENST00000550974 PLA2G4BP0C869 781 aa11.74□□□□□ -0.53
GPN3-208ENST00000550974 PABPC1P11940 636 aaKnown RBP11.74□□□□□ -0.53
GPN3-208ENST00000550974 FDPSP14324 419 aaKnown RBP11.74□□□□□ -0.53
GPN3-208ENST00000550974 C5AR1P21730 350 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms