RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 RAB23Q9ULC3 237 aa26.8■■□□□ 1.88
CPSF6-205ENST00000550075 VANGL2Q9ULK5 521 aa26.8■■□□□ 1.88
CPSF6-205ENST00000550075 SCINQ9Y6U3 715 aa26.8■■□□□ 1.88
CPSF6-205ENST00000550075 TCRBV5S1A1TA0A578 114 aa26.79■■□□□ 1.88
CPSF6-205ENST00000550075 LMNAP02545 664 aaKnown RBP26.79■■□□□ 1.88
CPSF6-205ENST00000550075 FTLP02792 175 aaPredicted RBP26.79■■□□□ 1.88
CPSF6-205ENST00000550075 ATP5BP06576 529 aaKnown RBP26.79■■□□□ 1.88
CPSF6-205ENST00000550075 POLR2EP19388 210 aaKnown RBP26.79■■□□□ 1.88
CPSF6-205ENST00000550075 WASP42768 502 aa26.79■■□□□ 1.88
CPSF6-205ENST00000550075 PXNP49023 591 aaPredicted RBP26.79■■□□□ 1.88
CPSF6-205ENST00000550075 C15orf59Q2T9L4 293 aaPredicted RBP26.79■■□□□ 1.88
CPSF6-205ENST00000550075 ANO7Q6IWH7 933 aa26.79■■□□□ 1.88
CPSF6-205ENST00000550075 TMEM92Q6UXU6 159 aa26.79■■□□□ 1.88
CPSF6-205ENST00000550075 KIAA0907Q7Z7F0 614 aaPredicted RBP26.79■■□□□ 1.88
CPSF6-205ENST00000550075 FAM172AQ8WUF8 416 aa26.79■■□□□ 1.88
CPSF6-205ENST00000550075 ZNF653Q96CK0 615 aa26.79■■□□□ 1.88
CPSF6-205ENST00000550075 HAPLN3Q96S86 360 aa26.79■■□□□ 1.88
CPSF6-205ENST00000550075 GABRG3Q99928 467 aa26.79■■□□□ 1.88
CPSF6-205ENST00000550075 EPC1Q9H2F5 836 aa26.79■■□□□ 1.88
CPSF6-205ENST00000550075 CACNA2D2Q9NY47 1150 aa26.79■■□□□ 1.88
CPSF6-205ENST00000550075 KIAA1522Q9P206 1035 aaPredicted RBP26.79■■□□□ 1.88
CPSF6-205ENST00000550075 BCCIPQ9P287 314 aaKnown RBP eCLIP26.79■■□□□ 1.88
CPSF6-205ENST00000550075 HCN2Q9UL51 889 aa26.79■■□□□ 1.88
CPSF6-205ENST00000550075 TCRBV21S2A2A0A5A6 115 aa26.78■■□□□ 1.88
CPSF6-205ENST00000550075 HNRNPH3P31942 346 aaKnown RBP26.78■■□□□ 1.88
CPSF6-205ENST00000550075 CD70P32970 193 aa26.78■■□□□ 1.88
CPSF6-205ENST00000550075 ZNF143P52747 638 aaPredicted RBP26.78■■□□□ 1.88
CPSF6-205ENST00000550075 ATXN1P54253 815 aaKnown RBP26.78■■□□□ 1.88
CPSF6-205ENST00000550075 LMAN2Q12907 356 aa26.78■■□□□ 1.88
CPSF6-205ENST00000550075 SLC12A1Q13621 1099 aa26.78■■□□□ 1.88
CPSF6-205ENST00000550075 PPP1R15BQ5SWA1 713 aa26.78■■□□□ 1.88
CPSF6-205ENST00000550075 MBLAC2Q68D91 279 aa26.78■■□□□ 1.88
CPSF6-205ENST00000550075 CCAR2Q8N163 923 aaKnown RBP26.78■■□□□ 1.88
CPSF6-205ENST00000550075 C1orf74Q96LT6 269 aa26.78■■□□□ 1.88
CPSF6-205ENST00000550075 ACOX2Q99424 681 aa26.78■■□□□ 1.88
CPSF6-205ENST00000550075 CNPY3Q9BT09 278 aa26.78■■□□□ 1.88
CPSF6-205ENST00000550075 ADAMTS1Q9UHI8 967 aa26.78■■□□□ 1.88
CPSF6-205ENST00000550075 PLA2G4CQ9UP65 541 aa26.78■■□□□ 1.88
CPSF6-205ENST00000550075 STON1Q9Y6Q2 735 aa26.78■■□□□ 1.88
CPSF6-205ENST00000550075 PRR23AA6NEV1 266 aa26.77■■□□□ 1.88
CPSF6-205ENST00000550075 CLDN11O75508 207 aa26.77■■□□□ 1.88
CPSF6-205ENST00000550075 ASLP04424 464 aa26.77■■□□□ 1.88
CPSF6-205ENST00000550075 GGCXP38435 758 aa26.77■■□□□ 1.88
CPSF6-205ENST00000550075 MRE11P49959 708 aa26.77■■□□□ 1.88
CPSF6-205ENST00000550075 ZNF234Q14588 700 aa26.77■■□□□ 1.88
CPSF6-205ENST00000550075 PLEKHA7Q6IQ23 1121 aa26.77■■□□□ 1.88
CPSF6-205ENST00000550075 SERPINA13PQ6UXR4 307 aa26.77■■□□□ 1.88
CPSF6-205ENST00000550075 CEP68Q76N32 757 aa26.77■■□□□ 1.88
CPSF6-205ENST00000550075 RASSF3Q86WH2 238 aa26.77■■□□□ 1.88
CPSF6-205ENST00000550075 DRC7Q8IY82 874 aa26.77■■□□□ 1.88
CPSF6-205ENST00000550075 OR8K1Q8NGG5 319 aa26.77■■□□□ 1.88
CPSF6-205ENST00000550075 CENPIQ92674 756 aaPredicted RBP26.77■■□□□ 1.88
CPSF6-205ENST00000550075 PPP1R9BQ96SB3 815 aa26.77■■□□□ 1.88
CPSF6-205ENST00000550075 ISCUQ9H1K1 167 aa26.77■■□□□ 1.88
CPSF6-205ENST00000550075 CNOT8Q9UFF9 292 aaKnown RBP26.77■■□□□ 1.88
CPSF6-205ENST00000550075 SMG5Q9UPR3 1016 aaKnown RBP26.77■■□□□ 1.88
CPSF6-205ENST00000550075 DLDP09622 509 aaKnown RBP26.76■■□□□ 1.87
CPSF6-205ENST00000550075 FUT11Q495W5 492 aa26.76■■□□□ 1.87
CPSF6-205ENST00000550075 FNDC3BQ53EP0 1204 aaKnown RBP26.76■■□□□ 1.87
CPSF6-205ENST00000550075 TMEM215Q68D42 235 aa26.76■■□□□ 1.87
CPSF6-205ENST00000550075 ADIPOR2Q86V24 386 aa26.76■■□□□ 1.87
CPSF6-205ENST00000550075 CIR1Q86X95 450 aaPredicted RBP26.76■■□□□ 1.87
CPSF6-205ENST00000550075 GAB3Q8WWW8 586 aa26.76■■□□□ 1.87
CPSF6-205ENST00000550075 DNAJC7Q99615 494 aa26.76■■□□□ 1.87
CPSF6-205ENST00000550075 ANP32EQ9BTT0 268 aa26.76■■□□□ 1.87
CPSF6-205ENST00000550075 MRPL47Q9HD33 250 aaKnown RBP26.76■■□□□ 1.87
CPSF6-205ENST00000550075 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.75■■□□□ 1.87
CPSF6-205ENST00000550075 CCP110O43303 1012 aa26.75■■□□□ 1.87
CPSF6-205ENST00000550075 ATMINO43313 823 aaPredicted RBP26.75■■□□□ 1.87
CPSF6-205ENST00000550075 GFRA3O60609 400 aa26.75■■□□□ 1.87
CPSF6-205ENST00000550075 RPP40O75818 363 aaKnown RBP26.75■■□□□ 1.87
CPSF6-205ENST00000550075 IL12RB1P42701 662 aa26.75■■□□□ 1.87
CPSF6-205ENST00000550075 CDH4P55283 916 aa26.75■■□□□ 1.87
CPSF6-205ENST00000550075 RPL7AP62424 266 aaKnown RBP26.75■■□□□ 1.87
CPSF6-205ENST00000550075 ZNF177Q13360 481 aaPredicted RBP26.75■■□□□ 1.87
CPSF6-205ENST00000550075 MAMLD1Q13495 774 aa26.75■■□□□ 1.87
CPSF6-205ENST00000550075 ENPP2Q13822 863 aa26.75■■□□□ 1.87
CPSF6-205ENST00000550075 SIM2Q14190 667 aaPredicted RBP26.75■■□□□ 1.87
CPSF6-205ENST00000550075 C5orf22Q49AR2 442 aa26.75■■□□□ 1.87
CPSF6-205ENST00000550075 PRR23BQ6ZRT6 265 aa26.75■■□□□ 1.87
CPSF6-205ENST00000550075 CNGA4Q8IV77 575 aa26.75■■□□□ 1.87
CPSF6-205ENST00000550075 PGBD3Q8N328 593 aa26.75■■□□□ 1.87
CPSF6-205ENST00000550075 MDGA1Q8NFP4 955 aa26.75■■□□□ 1.87
CPSF6-205ENST00000550075 HMGB4Q8WW32 186 aa26.75■■□□□ 1.87
CPSF6-205ENST00000550075 IGSF8Q969P0 613 aa26.75■■□□□ 1.87
CPSF6-205ENST00000550075 NTAN1Q96AB6 310 aa26.75■■□□□ 1.87
CPSF6-205ENST00000550075 LMLNQ96KR4 655 aa26.75■■□□□ 1.87
CPSF6-205ENST00000550075 ANLNQ9NQW6 1124 aa26.75■■□□□ 1.87
CPSF6-205ENST00000550075 ZFHX2Q9C0A1 2572 aaPredicted RBP26.74■■□□□ 1.87
CPSF6-205ENST00000550075 SYNCRIPO60506 623 aaKnown RBP26.74■■□□□ 1.87
CPSF6-205ENST00000550075 MFAP3LO75121 409 aa26.74■■□□□ 1.87
CPSF6-205ENST00000550075 PLEKP08567 350 aaPredicted RBP26.74■■□□□ 1.87
CPSF6-205ENST00000550075 HOXC13P31276 330 aa26.74■■□□□ 1.87
CPSF6-205ENST00000550075 ADRA1BP35368 520 aa26.74■■□□□ 1.87
CPSF6-205ENST00000550075 HDAC4P56524 1084 aa26.74■■□□□ 1.87
CPSF6-205ENST00000550075 ST8SIA6P61647 398 aa26.74■■□□□ 1.87
CPSF6-205ENST00000550075 USP39Q53GS9 565 aaKnown RBP26.74■■□□□ 1.87
CPSF6-205ENST00000550075 PITRM1Q5JRX3 1037 aa26.74■■□□□ 1.87
CPSF6-205ENST00000550075 SH3PXD2AQ5TCZ1 1133 aa26.74■■□□□ 1.87
CPSF6-205ENST00000550075 TMC6Q7Z403 805 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms