RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 CCDC33Q8N5R6 958 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 ALLCQ8N6M5 410 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 NAT16Q8N8M0 369 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 TERB1Q8NA31 727 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 OLIG1Q8TAK6 271 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 ZNF417Q8TAU3 575 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 SLC35F5Q8WV83 523 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 KCTD13Q8WZ19 329 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 NDRG1Q92597 394 aaKnown RBP6.96□□□□□ -1.3
TMEM116-208ENST00000549537 SECISBP2LQ93073 1101 aaKnown RBP6.96□□□□□ -1.3
TMEM116-208ENST00000549537 LOXL4Q96JB6 756 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 CNOT6LQ96LI5 555 aaKnown RBP6.96□□□□□ -1.3
TMEM116-208ENST00000549537 KREMEN1Q96MU8 473 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 NT5C1BQ96P26 610 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 ZNF587Q96SQ5 575 aaPredicted RBP6.96□□□□□ -1.3
TMEM116-208ENST00000549537 SRRTQ9BXP5 876 aaKnown RBP6.96□□□□□ -1.3
TMEM116-208ENST00000549537 ULBP1Q9BZM6 244 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 NACA2Q9H009 215 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 CD248Q9HCU0 757 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 ARHGEF4Q9NR80 690 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 CHMP5Q9NZZ3 219 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 FBXO10Q9UK96 956 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 RAB23Q9ULC3 237 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 KIAA1257Q9ULG3 409 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 STARD13Q9Y3M8 1113 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 SDK1Q7Z5N4 2213 aa6.96□□□□□ -1.3
TMEM116-208ENST00000549537 DSPP15924 2871 aaKnown RBP6.95□□□□□ -1.3
TMEM116-208ENST00000549537 GFRA2O00451 464 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 DCLK1O15075 740 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 SH3BP5O60239 455 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 KLF8O95600 359 aaPredicted RBP6.95□□□□□ -1.3
TMEM116-208ENST00000549537 ZBED1O96006 694 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 PENKP01210 267 aaPredicted RBP6.95□□□□□ -1.3
TMEM116-208ENST00000549537 CALCAP01258 141 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 AFPP02771 609 aaKnown RBP6.95□□□□□ -1.3
TMEM116-208ENST00000549537 S100BP04271 92 aaPredicted RBP6.95□□□□□ -1.3
TMEM116-208ENST00000549537 CISD3P0C7P0 127 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 SETSIPP0DME0 302 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 RALAP11233 206 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 TYRP14679 529 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 CD19P15391 556 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 MPSTP25325 297 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 RPL34P49207 117 aaKnown RBP6.95□□□□□ -1.3
TMEM116-208ENST00000549537 TKTL1P51854 596 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 DGKEP52429 567 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 YWHAGP61981 247 aaKnown RBP eCLIP6.95□□□□□ -1.3
TMEM116-208ENST00000549537 LMNB2Q03252 620 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 GOLGA8FQ08AF8 430 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 GOLGA8DPQ0D2H9 430 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 ADIGQ0VDE8 80 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 EFEMP1Q12805 493 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 PUM1Q14671 1186 aaKnown RBP eCLIP6.95□□□□□ -1.3
TMEM116-208ENST00000549537 CNGA2Q16280 664 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 CSRP2Q16527 193 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 CAMK4Q16566 473 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 ANO4Q32M45 955 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 C11orf91Q3C1V1 193 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 FYB2Q5VWT5 728 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 ALKBH2Q6NS38 261 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 TMEM270Q6UE05 265 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 CLEC17AQ6ZS10 378 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 TOGARAM2Q6ZUX3 1019 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 CEP68Q76N32 757 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 RRAGAQ7L523 313 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 CACNA2D4Q7Z3S7 1137 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.95□□□□□ -1.3
TMEM116-208ENST00000549537 TADA2BQ86TJ2 420 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 MIB1Q86YT6 1006 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 FMNL3Q8IVF7 1028 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 FAM217AQ8IXS0 508 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 ARHGAP18Q8N392 663 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 PPM1KQ8N3J5 372 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 GPATCH11Q8N954 259 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 TXNDC5Q8NBS9 432 aaKnown RBP6.95□□□□□ -1.3
TMEM116-208ENST00000549537 MDGA1Q8NFP4 955 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 TSTD1Q8NFU3 115 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 UBA3Q8TBC4 463 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 CDK5RAP1Q96SZ6 601 aaKnown RBP6.95□□□□□ -1.3
TMEM116-208ENST00000549537 MDFIQ99750 246 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 INTS2Q9H0H0 1204 aaKnown RBP6.95□□□□□ -1.3
TMEM116-208ENST00000549537 DUSP15Q9H1R2 295 aaPredicted RBP6.95□□□□□ -1.3
TMEM116-208ENST00000549537 ZDHHC4Q9NPG8 344 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 SEMA4GQ9NTN9 838 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 WDR35Q9P2L0 1181 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 DEC1Q9P2X7 70 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 RWDD2AQ9UIY3 292 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 LSM7Q9UK45 103 aaKnown RBP6.95□□□□□ -1.3
TMEM116-208ENST00000549537 USP18Q9UMW8 372 aa6.95□□□□□ -1.3
TMEM116-208ENST00000549537 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.95□□□□□ -1.3
TMEM116-208ENST00000549537 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.95□□□□□ -1.3
TMEM116-208ENST00000549537 TNRC6BQ9UPQ9 1833 aaKnown RBP6.94□□□□□ -1.3
TMEM116-208ENST00000549537 A0A1W2PQF6 199 aa6.94□□□□□ -1.3
TMEM116-208ENST00000549537 TBC1D3BA6NDS4 549 aa6.94□□□□□ -1.3
TMEM116-208ENST00000549537 YJEFN3A6XGL0 299 aa6.94□□□□□ -1.3
TMEM116-208ENST00000549537 PRR5-ARHGAP8B1AHC4 643 aa6.94□□□□□ -1.3
TMEM116-208ENST00000549537 PRRT4C9JH25 899 aa6.94□□□□□ -1.3
TMEM116-208ENST00000549537 E7ENQ6 273 aa6.94□□□□□ -1.3
TMEM116-208ENST00000549537 NEDD8-MDP1E9PL57 170 aa6.94□□□□□ -1.3
TMEM116-208ENST00000549537 DNAJC6O75061 913 aa6.94□□□□□ -1.3
TMEM116-208ENST00000549537 IGLV3-27P01718 113 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms