RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 KCNJ12Q14500 433 aa17.1■□□□□ 0.33
SSH1-208ENST00000548522 SHBQ15464 509 aa17.1■□□□□ 0.33
SSH1-208ENST00000548522 FSCBQ5H9T9 825 aa17.1■□□□□ 0.33
SSH1-208ENST00000548522 PMF1Q6P1K2 205 aa17.1■□□□□ 0.33
SSH1-208ENST00000548522 NCEH1Q6PIU2 408 aa17.1■□□□□ 0.33
SSH1-208ENST00000548522 GALNT15Q8N3T1 639 aa17.1■□□□□ 0.33
SSH1-208ENST00000548522 GANCQ8TET4 914 aa17.1■□□□□ 0.33
SSH1-208ENST00000548522 KCTD13Q8WZ19 329 aa17.1■□□□□ 0.33
SSH1-208ENST00000548522 CNGB3Q9NQW8 809 aa17.1■□□□□ 0.33
SSH1-208ENST00000548522 FBXL12Q9NXK8 326 aa17.1■□□□□ 0.33
SSH1-208ENST00000548522 FTSJ1Q9UET6 329 aa17.1■□□□□ 0.33
SSH1-208ENST00000548522 COQ4Q9Y3A0 265 aa17.1■□□□□ 0.33
SSH1-208ENST00000548522 PLXNA2O75051 1894 aa17.1■□□□□ 0.33
SSH1-208ENST00000548522 A0A1B0GTQ1 180 aa17.09■□□□□ 0.33
SSH1-208ENST00000548522 PLK4O00444 970 aa17.09■□□□□ 0.33
SSH1-208ENST00000548522 CETN3O15182 167 aa17.09■□□□□ 0.33
SSH1-208ENST00000548522 ACSL4O60488 711 aa17.09■□□□□ 0.33
SSH1-208ENST00000548522 STX10O60499 249 aa17.09■□□□□ 0.33
SSH1-208ENST00000548522 GALCP54803 685 aa17.09■□□□□ 0.33
SSH1-208ENST00000548522 DNAJC3Q13217 504 aa17.09■□□□□ 0.33
SSH1-208ENST00000548522 KLHL40Q2TBA0 621 aa17.09■□□□□ 0.33
SSH1-208ENST00000548522 HNRNPA1L2Q32P51 320 aaKnown RBP17.09■□□□□ 0.33
SSH1-208ENST00000548522 KAT5Q92993 513 aa17.09■□□□□ 0.33
SSH1-208ENST00000548522 DCBLD2Q96PD2 775 aa17.09■□□□□ 0.33
SSH1-208ENST00000548522 ACE2Q9BYF1 805 aaPredicted RBP17.09■□□□□ 0.33
SSH1-208ENST00000548522 NUCKS1Q9H1E3 243 aaKnown RBP17.09■□□□□ 0.33
SSH1-208ENST00000548522 ATP6V1DQ9Y5K8 247 aa17.09■□□□□ 0.33
SSH1-208ENST00000548522 ASXL3Q9C0F0 2248 aa17.08■□□□□ 0.33
SSH1-208ENST00000548522 A0A087WV48 116 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 A0A1W2PPC4 97 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 TTC34A8MYJ7 566 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 RNF225M0QZC1 329 aaPredicted RBP17.08■□□□□ 0.32
SSH1-208ENST00000548522 VILLO15195 856 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 PAPSS1O43252 624 aaPredicted RBP17.08■□□□□ 0.32
SSH1-208ENST00000548522 VDRP11473 427 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 BRD2P25440 801 aaKnown RBP17.08■□□□□ 0.32
SSH1-208ENST00000548522 PRCPP42785 496 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 SLC11A2P49281 568 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 C21orf59P57076 290 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 TBX4P57082 545 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 RACK1P63244 317 aaKnown RBP17.08■□□□□ 0.32
SSH1-208ENST00000548522 KRT85P78386 507 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 PNOCQ13519 176 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 CST6Q15828 149 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 MPP7Q5T2T1 576 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 C9orf64Q5T6V5 341 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 LCLAT1Q6UWP7 414 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 MMAAQ8IVH4 418 aaKnown RBP17.08■□□□□ 0.32
SSH1-208ENST00000548522 CFAP52Q8N1V2 620 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 PDCD7Q8N8D1 485 aaKnown RBP17.08■□□□□ 0.32
SSH1-208ENST00000548522 HJURPQ8NCD3 748 aaPredicted RBP17.08■□□□□ 0.32
SSH1-208ENST00000548522 ADAM32Q8TC27 787 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 SLC35F5Q8WV83 523 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 GOLGA1Q92805 767 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 SLC35C1Q96A29 364 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 TTC17Q96AE7 1141 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 FCRL2Q96LA5 508 aaPredicted RBP17.08■□□□□ 0.32
SSH1-208ENST00000548522 NEUROG2Q9H2A3 272 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 SUN2Q9UH99 717 aa17.08■□□□□ 0.32
SSH1-208ENST00000548522 XPO7Q9UIA9 1087 aaKnown RBP17.08■□□□□ 0.32
SSH1-208ENST00000548522 TRIM49BA6NDI0 452 aa17.07■□□□□ 0.32
SSH1-208ENST00000548522 C10orf142B7Z368 130 aa17.07■□□□□ 0.32
SSH1-208ENST00000548522 M0QYV0 167 aa17.07■□□□□ 0.32
SSH1-208ENST00000548522 RNASEH2AO75792 299 aaKnown RBP17.07■□□□□ 0.32
SSH1-208ENST00000548522 ZNF202O95125 648 aa17.07■□□□□ 0.32
SSH1-208ENST00000548522 LTFP02788 710 aa17.07■□□□□ 0.32
SSH1-208ENST00000548522 FYNP06241 537 aa17.07■□□□□ 0.32
SSH1-208ENST00000548522 PSMD8P48556 350 aa17.07■□□□□ 0.32
SSH1-208ENST00000548522 NUGGCQ68CJ6 796 aa17.07■□□□□ 0.32
SSH1-208ENST00000548522 TMEM270Q6UE05 265 aa17.07■□□□□ 0.32
SSH1-208ENST00000548522 USP30Q70CQ3 517 aa17.07■□□□□ 0.32
SSH1-208ENST00000548522 SCML4Q8N228 414 aa17.07■□□□□ 0.32
SSH1-208ENST00000548522 CARNMT1Q8N4J0 409 aa17.07■□□□□ 0.32
SSH1-208ENST00000548522 AADATQ8N5Z0 425 aa17.07■□□□□ 0.32
SSH1-208ENST00000548522 FIBINQ8TAL6 211 aa17.07■□□□□ 0.32
SSH1-208ENST00000548522 DQX1Q8TE96 717 aaKnown RBP17.07■□□□□ 0.32
SSH1-208ENST00000548522 ELF4Q99607 663 aaPredicted RBP17.07■□□□□ 0.32
SSH1-208ENST00000548522 MIS12Q9H081 205 aa17.07■□□□□ 0.32
SSH1-208ENST00000548522 GDPD2Q9HCC8 539 aa17.07■□□□□ 0.32
SSH1-208ENST00000548522 A0A1W2PQ27 194 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 A0A1W2PQ64 194 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 ENC1O14682 589 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 SLC16A3O15427 465 aaKnown RBP17.06■□□□□ 0.32
SSH1-208ENST00000548522 IRAK2O43187 625 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 ZIC2O95409 532 aaPredicted RBP17.06■□□□□ 0.32
SSH1-208ENST00000548522 MOCS2O96007 188 aaPredicted RBP17.06■□□□□ 0.32
SSH1-208ENST00000548522 PRB1P04280 392 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 ITPKBP27987 946 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 METAP1P53582 386 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 ST8SIA6P61647 398 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 PPP2CBP62714 309 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 PPP2CAP67775 309 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 INAVAQ3KP66 663 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 PITRM1Q5JRX3 1037 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 ANKRD40Q6AI12 368 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 UNC45BQ8IWX7 931 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 SCUBE3Q8IX30 993 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 PIP4K2CQ8TBX8 421 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 SAP25Q8TEE9 199 aa17.06■□□□□ 0.32
SSH1-208ENST00000548522 IRGQQ8WZA9 623 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms