RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 TTC17Q96AE7 1141 aa12.9□□□□□ -0.34
GCN1-204ENST00000548132 NAA15Q9BXJ9 866 aaKnown RBP12.9□□□□□ -0.34
GCN1-204ENST00000548132 LHX5Q9H2C1 402 aa12.9□□□□□ -0.34
GCN1-204ENST00000548132 THAP9Q9H5L6 903 aa12.9□□□□□ -0.34
GCN1-204ENST00000548132 C6orf106Q9H6K1 298 aaPredicted RBP12.9□□□□□ -0.34
GCN1-204ENST00000548132 POPDC2Q9HBU9 364 aa12.9□□□□□ -0.34
GCN1-204ENST00000548132 PLCB1Q9NQ66 1216 aa12.9□□□□□ -0.34
GCN1-204ENST00000548132 ANLNQ9NQW6 1124 aa12.9□□□□□ -0.34
GCN1-204ENST00000548132 DNAAF2Q9NVR5 837 aaKnown RBP12.9□□□□□ -0.34
GCN1-204ENST00000548132 STIM2Q9P246 746 aa12.9□□□□□ -0.34
GCN1-204ENST00000548132 ANGPTL2Q9UKU9 493 aa12.9□□□□□ -0.34
GCN1-204ENST00000548132 NFE2L3Q9Y4A8 694 aa12.9□□□□□ -0.34
GCN1-204ENST00000548132 KCNU1A8MYU2 1149 aa12.89□□□□□ -0.35
GCN1-204ENST00000548132 ARHGAP33O14559 1287 aa12.89□□□□□ -0.35
GCN1-204ENST00000548132 TFE3P19532 575 aaPredicted RBP12.89□□□□□ -0.35
GCN1-204ENST00000548132 TACR2P21452 398 aa12.89□□□□□ -0.35
GCN1-204ENST00000548132 SLC11A2P49281 568 aa12.89□□□□□ -0.35
GCN1-204ENST00000548132 DCAF12L1Q5VU92 463 aa12.89□□□□□ -0.35
GCN1-204ENST00000548132 CXorf57Q6NSI4 855 aaKnown RBP12.89□□□□□ -0.35
GCN1-204ENST00000548132 TRNP1Q6NT89 227 aa12.89□□□□□ -0.35
GCN1-204ENST00000548132 CHSY1Q86X52 802 aa12.89□□□□□ -0.35
GCN1-204ENST00000548132 FAM71AQ8IYT1 594 aa12.89□□□□□ -0.35
GCN1-204ENST00000548132 DEFB106AQ8N104 65 aa12.89□□□□□ -0.35
GCN1-204ENST00000548132 CEP76Q8TAP6 659 aa12.89□□□□□ -0.35
GCN1-204ENST00000548132 PRCCQ92733 491 aaPredicted RBP12.89□□□□□ -0.35
GCN1-204ENST00000548132 ASNSD1Q9NWL6 643 aa12.89□□□□□ -0.35
GCN1-204ENST00000548132 CELSR3Q9NYQ7 3312 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 FAM208BQ5VWN6 2430 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 NBEAQ8NFP9 2946 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 SPAARA0A1B0GVQ0 90 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 MEI4A8MW99 385 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 FOXN3O00409 490 aaPredicted RBP12.88□□□□□ -0.35
GCN1-204ENST00000548132 MED7O43513 233 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 SYNCRIPO60506 623 aaKnown RBP12.88□□□□□ -0.35
GCN1-204ENST00000548132 SIN3BO75182 1162 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 GRAP2O75791 330 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 KRT37O76014 449 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 FGFR1OPO95684 399 aaKnown RBP12.88□□□□□ -0.35
GCN1-204ENST00000548132 CEACAM1P13688 526 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 CDH5P33151 784 aaPredicted RBP12.88□□□□□ -0.35
GCN1-204ENST00000548132 MTIF2P46199 727 aaKnown RBP12.88□□□□□ -0.35
GCN1-204ENST00000548132 NUMBP49757 651 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 STK19P49842 368 aaPredicted RBP12.88□□□□□ -0.35
GCN1-204ENST00000548132 YWHAZP63104 245 aaKnown RBP12.88□□□□□ -0.35
GCN1-204ENST00000548132 ARID5BQ14865 1188 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 HNRNPA1L2Q32P51 320 aaKnown RBP12.88□□□□□ -0.35
GCN1-204ENST00000548132 PLEKHG6Q3KR16 790 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 LAYNQ6UX15 382 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 RBM43Q6ZSC3 357 aaKnown RBP12.88□□□□□ -0.35
GCN1-204ENST00000548132 SLC26A9Q7LBE3 791 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 FAM124AQ86V42 546 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 APCDD1Q8J025 514 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 LGI2Q8N0V4 545 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 CARNMT1Q8N4J0 409 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 CADM4Q8NFZ8 388 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 GOLGA1Q92805 767 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 FOXJ1Q92949 421 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 GTPBP2Q9BX10 602 aaKnown RBP12.88□□□□□ -0.35
GCN1-204ENST00000548132 NUP62CLQ9H1M0 184 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 RSPH9Q9H1X1 276 aaPredicted RBP12.88□□□□□ -0.35
GCN1-204ENST00000548132 GANQ9H2C0 597 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 NDST4Q9H3R1 872 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 IL21RQ9HBE5 538 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 SAMSN1Q9NSI8 373 aaKnown RBP12.88□□□□□ -0.35
GCN1-204ENST00000548132 LMBRD1Q9NUN5 540 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 DNAJC12Q9UKB3 198 aa12.88□□□□□ -0.35
GCN1-204ENST00000548132 FNDC3AQ9Y2H6 1198 aaKnown RBP12.88□□□□□ -0.35
GCN1-204ENST00000548132 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.88□□□□□ -0.35
GCN1-204ENST00000548132 FAM170AA1A519 330 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 METTL12A8MUP2 240 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 TTC34A8MYJ7 566 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 EPHB6O15197 1021 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 TIMM44O43615 452 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 HSF2BPO75031 334 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 APOEP02649 317 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 IGHV4-34P06331 123 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 VAV1P15498 845 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 ERCC5P28715 1186 aaPredicted RBP12.87□□□□□ -0.35
GCN1-204ENST00000548132 USP8P40818 1118 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 METAP1P53582 386 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 GFPT1Q06210 699 aaPredicted RBP12.87□□□□□ -0.35
GCN1-204ENST00000548132 FOXC1Q12948 553 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 CDH18Q13634 790 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 VWA3BQ502W6 1294 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 CDKAL1Q5VV42 579 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 BNIPLQ7Z465 357 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 RABEPKQ7Z6M1 372 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 ZNF683Q8IZ20 524 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 ZNF397Q8NF99 534 aaPredicted RBP12.87□□□□□ -0.35
GCN1-204ENST00000548132 BAHD1Q8TBE0 780 aaPredicted RBP12.87□□□□□ -0.35
GCN1-204ENST00000548132 GPT2Q8TD30 523 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 GATA6Q92908 595 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 IGSF8Q969P0 613 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 ALG14Q96F25 216 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 PPP1R13BQ96KQ4 1090 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 BTN2A3PQ96KV6 586 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 CAMK1GQ96NX5 476 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 TUBGCP2Q9BSJ2 902 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 FAM204AQ9H8W3 233 aa12.87□□□□□ -0.35
GCN1-204ENST00000548132 FBRSQ9HAH7 460 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms