RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 SYNJ2BP-COX16A0A087WUM0 186 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 SPAARA0A1B0GVQ0 90 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 FAM170AA1A519 330 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 TYW5A2RUC4 315 aaKnown RBP6.95□□□□□ -1.3
SCAF11-211ENST00000547950 METTL12A8MUP2 240 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 BECN2A8MW95 431 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 E5RJQ4 531 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 H0Y626 953 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 IRAK2O43187 625 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 PAPSS1O43252 624 aaPredicted RBP6.95□□□□□ -1.3
SCAF11-211ENST00000547950 KRT37O76014 449 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 TOP3BO95985 862 aaKnown RBP6.95□□□□□ -1.3
SCAF11-211ENST00000547950 SYPP08247 313 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 DLDP09622 509 aaKnown RBP6.95□□□□□ -1.3
SCAF11-211ENST00000547950 SPINK2P20155 84 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 PON1P27169 355 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 CSKP41240 450 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 SMCPP49901 116 aaPredicted RBP6.95□□□□□ -1.3
SCAF11-211ENST00000547950 RPS24P62847 133 aaKnown RBP6.95□□□□□ -1.3
SCAF11-211ENST00000547950 SIM1P81133 766 aaPredicted RBP6.95□□□□□ -1.3
SCAF11-211ENST00000547950 SKOR1P84550 965 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 RING1Q06587 406 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 CAMK2GQ13555 558 aaPredicted RBP6.95□□□□□ -1.3
SCAF11-211ENST00000547950 ST3GAL2Q16842 350 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 PTPRNQ16849 979 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 EXOC3L4Q17RC7 722 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 HSP90AA4PQ58FG1 418 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 DCAF6Q58WW2 860 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 MS4A13Q5J8X5 152 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 MPP7Q5T2T1 576 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 DCAF12L1Q5VU92 463 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 RAP1GAP2Q684P5 730 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 NADSYN1Q6IA69 706 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 TRIM65Q6PJ69 517 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 MMS22LQ6ZRQ5 1243 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 KIAA0907Q7Z7F0 614 aaPredicted RBP6.95□□□□□ -1.3
SCAF11-211ENST00000547950 TMEM110Q86TL2 294 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 TAC4Q86UU9 113 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 RETREG3Q86VR2 466 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 IRF2BP1Q8IU81 584 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 PASD1Q8IV76 773 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 MFN1Q8IWA4 741 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 LGI2Q8N0V4 545 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 AHI1Q8N157 1196 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 ZCCHC9Q8N567 271 aaKnown RBP6.95□□□□□ -1.3
SCAF11-211ENST00000547950 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.95□□□□□ -1.3
SCAF11-211ENST00000547950 MLKLQ8NB16 471 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 HJURPQ8NCD3 748 aaPredicted RBP6.95□□□□□ -1.3
SCAF11-211ENST00000547950 CADM4Q8NFZ8 388 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 FIBINQ8TAL6 211 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 WFDC5Q8TCV5 224 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 GANCQ8TET4 914 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 SNX19Q92543 992 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 RNF34Q969K3 372 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 AZIN2Q96A70 460 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 FAM81BQ96LP2 452 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 SERPINB11Q96P15 392 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 NUCKS1Q9H1E3 243 aaKnown RBP6.95□□□□□ -1.3
SCAF11-211ENST00000547950 LHX5Q9H2C1 402 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 TMEM245Q9H330 911 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 THAP9Q9H5L6 903 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 POPDC2Q9HBU9 364 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 PRSS16Q9NQE7 514 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 CHMP5Q9NZZ3 219 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 COX16Q9P0S2 106 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 USP36Q9P275 1121 aaKnown RBP6.95□□□□□ -1.3
SCAF11-211ENST00000547950 APEX2Q9UBZ4 518 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 TJP2Q9UDY2 1190 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 SUSD2Q9UGT4 822 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 SUN2Q9UH99 717 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 EIF2B4Q9UI10 523 aaKnown RBP6.95□□□□□ -1.3
SCAF11-211ENST00000547950 CYTH4Q9UIA0 394 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 XPO7Q9UIA9 1087 aaKnown RBP6.95□□□□□ -1.3
SCAF11-211ENST00000547950 TLR6Q9Y2C9 796 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 CEP83Q9Y592 693 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 GREB1Q4ZG55 1949 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 DENND4CQ5VZ89 1909 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 ANAPC1Q9H1A4 1944 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 SPTBN2O15020 2390 aa6.95□□□□□ -1.3
SCAF11-211ENST00000547950 ZNF638Q14966 1978 aaKnown RBP6.95□□□□□ -1.3
SCAF11-211ENST00000547950 PTPRDP23468 1912 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 A0A1B0GTW7 788 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 FAM47DPA6NHR8 397 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 PES1O00541 588 aaKnown RBP6.94□□□□□ -1.3
SCAF11-211ENST00000547950 BCAT2O15382 392 aaPredicted RBP6.94□□□□□ -1.3
SCAF11-211ENST00000547950 SH3BP5O60239 455 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 GRAP2O75791 330 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 FSBPO95073 299 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 TRUB2O95900 331 aaKnown RBP6.94□□□□□ -1.3
SCAF11-211ENST00000547950 APOEP02649 317 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 DNTTP04053 509 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 CD59P13987 128 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 TACR2P21452 398 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 ACSL1P33121 698 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 KRT9P35527 623 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 RPL34P49207 117 aaKnown RBP6.94□□□□□ -1.3
SCAF11-211ENST00000547950 CSNK1EP49674 416 aaKnown RBP6.94□□□□□ -1.3
SCAF11-211ENST00000547950 NUMBP49757 651 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 ST8SIA6P61647 398 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 RPS14P62263 151 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms