RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 ATG14Q6ZNE5 492 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 BPHLQ86WA6 291 aaPredicted RBP12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 SLC26A11Q86WA9 606 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 REM2Q8IYK8 340 aaPredicted RBP12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 SLC4A9Q96Q91 983 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 DHRS4Q9BTZ2 278 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 GPRC5CQ9NQ84 441 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 FETUBQ9UGM5 382 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 PCP4L1A6NKN8 68 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 FAM86B1E9PN63 330 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 AURKAO14965 403 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 ZBTB14O43829 449 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 ENTPD3O75355 529 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 PROSCO94903 275 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 BPGMP07738 259 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 APRTP07741 180 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 LSM3P62310 102 aaKnown RBP12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 PHC1P78364 1004 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 SPIRE1Q08AE8 756 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 KLF10Q13118 480 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 SNRNP35Q16560 246 aaKnown RBP12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 NFIL3Q16649 462 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 HADHQ16836 314 aaKnown RBP12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 AOC3Q16853 763 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 C16orf86Q6ZW13 317 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 KCTD8Q6ZWB6 473 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 FAM20CQ8IXL6 584 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 GOLM1Q8NBJ4 401 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 PSD4Q8NDX1 1056 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 LILRB4Q8NHJ6 448 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 KBTBD7Q8WVZ9 684 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 FEM1CQ96JP0 617 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 ZFYVE19Q96K21 471 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 MCEEQ96PE7 176 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 MIR1-1HGQ9H1L0 117 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 SLC9A2Q9UBY0 812 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 SATB2Q9UPW6 733 aa12.23□□□□□ -0.45
RBFOX1-208ENST00000547372 TIPRLO75663 272 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 FARP2O94887 1054 aaPredicted RBP12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 PSMA2P25787 234 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 GNA15P30679 374 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 SERPINB1P30740 379 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 GRM5P41594 1212 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 LIG4P49917 911 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 SHROOM1Q2M3G4 852 aaPredicted RBP12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 SLC10A5Q5PT55 438 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 TXNRD3NBQ6F5E7 133 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 MMAAQ8IVH4 418 aaKnown RBP12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 CHERPQ8IWX8 916 aaKnown RBP12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 MCOLN2Q8IZK6 566 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 ACTL9Q8TC94 416 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 VCPIP1Q96JH7 1222 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 TSNARE1Q96NA8 513 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 C17orf80Q9BSJ5 609 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 SOX17Q9H6I2 414 aaPredicted RBP12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 AGO2Q9UKV8 859 aaKnown RBP12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 PSTPIP1O43586 416 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 ME2P23368 584 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 OPRL1P41146 370 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 QARSP47897 775 aaKnown RBP12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 TRPC3Q13507 836 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 CEACAM7Q14002 265 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 NFIXQ14938 502 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 CLEC16AQ2KHT3 1053 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 FAM47CQ5HY64 1035 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 EXD1Q8NHP7 514 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 SLC44A1Q8WWI5 657 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 WDR83Q9BRX9 315 aaKnown RBP12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 C1orf50Q9BV19 199 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 KMT5AQ9NQR1 393 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 RAB6BQ9NRW1 208 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 SFMBT1Q9UHJ3 866 aa12.22□□□□□ -0.45
RBFOX1-208ENST00000547372 P4HBP07237 508 aaKnown RBP12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 RPL22P35268 128 aaKnown RBP12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 SEPHS1P49903 392 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 RPL7AP62424 266 aaKnown RBP12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 SLC18A2Q05940 514 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 SLC13A2Q13183 592 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 DMP1Q13316 513 aaPredicted RBP12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 CCDC142Q17RM4 750 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 WDR78Q5VTH9 848 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 ZFP1Q6P2D0 407 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 CCDC81Q6ZN84 652 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 KATNAL2Q8IYT4 538 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 SLC38A6Q8IZM9 456 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 DTX3Q8N9I9 347 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 DEPDC1BQ8WUY9 529 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 SHC3Q92529 594 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 BHMTQ93088 406 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 NPAS2Q99743 824 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 ITM2CQ9NQX7 267 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 TBC1D22BQ9NU19 505 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 ZC3H7BQ9UGR2 993 aaKnown RBP12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 CCDC162PA2VCL2 907 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 ZNF839A8K0R7 811 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 F8VP50 259 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 NRP1O14786 923 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 HSPA4LO95757 839 aa12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 ZNF26P17031 533 aaPredicted RBP12.21□□□□□ -0.45
RBFOX1-208ENST00000547372 TFE3P19532 575 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms