RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 PSME4Q14997 1843 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 CROCCQ5TZA2 2017 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 A0A0G2JLL6 359 aaPredicted RBP15.04■□□□□ -0
HOXC11-202ENST00000546378 CXCL11O14625 94 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 PPEF2O14830 753 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 SUPT20HL2P0C7V6 817 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 XRCC1P18887 633 aaPredicted RBP15.04■□□□□ -0
HOXC11-202ENST00000546378 HUNKP57058 714 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 LBRQ14739 615 aaKnown RBP15.04■□□□□ -0
HOXC11-202ENST00000546378 PMF1Q6P1K2 205 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 PRRT2Q7Z6L0 340 aaPredicted RBP15.04■□□□□ -0
HOXC11-202ENST00000546378 C2orf69Q8N8R5 385 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 COLGALT1Q8NBJ5 622 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 NLRP7Q8WX94 980 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 TMIGD2Q96BF3 282 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 MFSD3Q96ES6 412 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 TUBB6Q9BUF5 446 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 RSAD1Q9HA92 442 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 DRG1Q9Y295 367 aaKnown RBP15.04■□□□□ -0
HOXC11-202ENST00000546378 NEMP2A6NFY4 417 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 SAC3D1A6NKF1 404 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 ZBTB14O43829 449 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 P4HA1P13674 534 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 TLR1Q15399 786 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.04■□□□□ -0
HOXC11-202ENST00000546378 CHST15Q7LFX5 561 aaPredicted RBP15.04■□□□□ -0
HOXC11-202ENST00000546378 FBXO16Q8IX29 292 aaPredicted RBP15.04■□□□□ -0
HOXC11-202ENST00000546378 KIF12Q96FN5 646 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 ZNF778Q96MU6 729 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 SYBUQ9NX95 663 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 KCNK4Q9NYG8 393 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 THEGQ9P2T0 379 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 E7ENQ6 273 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 PDHXO00330 501 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 CCL22O00626 93 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 CDK7P50613 346 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 CCNIQ14094 377 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 TFDP2Q14188 446 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 NADK2Q4G0N4 442 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 SH3D19Q5HYK7 790 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 FASTKD5Q7L8L6 764 aaKnown RBP15.03■□□□□ -0
HOXC11-202ENST00000546378 TDRPQ86YL5 185 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 NAT14Q8WUY8 206 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 RNF34Q969K3 372 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 FBXL18Q96ME1 805 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 POPDC2Q9HBU9 364 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 CCDC167Q9P0B6 97 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 TSPAN3O60637 253 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 ARRB2P32121 409 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 PPP1R26Q5T8A7 1209 aaPredicted RBP15.03■□□□□ -0
HOXC11-202ENST00000546378 ITPRIPL1Q6GPH6 555 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 TRIM67Q6ZTA4 783 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 CDKL2Q92772 493 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 RNF157Q96PX1 679 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 IARS2Q9NSE4 1012 aaKnown RBP15.03■□□□□ -0
HOXC11-202ENST00000546378 PAK5Q9P286 719 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 ASB3Q9Y575 518 aa15.03■□□□□ -0
HOXC11-202ENST00000546378 A0A087WZ62 844 aa15.02■□□□□ -0
HOXC11-202ENST00000546378 CPA3P15088 417 aa15.02■□□□□ -0
HOXC11-202ENST00000546378 UGT1A6P19224 532 aa15.02■□□□□ -0
HOXC11-202ENST00000546378 IDH3AP50213 366 aa15.02■□□□□ -0
HOXC11-202ENST00000546378 CCR3P51677 355 aa15.02■□□□□ -0
HOXC11-202ENST00000546378 THOP1P52888 689 aa15.02■□□□□ -0
HOXC11-202ENST00000546378 OAZ1P54368 228 aa15.02■□□□□ -0
HOXC11-202ENST00000546378 SLC10A2Q12908 348 aaPredicted RBP15.02■□□□□ -0
HOXC11-202ENST00000546378 PPIL2Q13356 520 aa15.02■□□□□ -0
HOXC11-202ENST00000546378 ARHGAP17Q68EM7 881 aa15.02■□□□□ -0
HOXC11-202ENST00000546378 EFCAB12Q6NXP0 572 aa15.02■□□□□ -0
HOXC11-202ENST00000546378 CHST13Q8NET6 341 aa15.02■□□□□ -0
HOXC11-202ENST00000546378 MZB1Q8WU39 189 aa15.02■□□□□ -0
HOXC11-202ENST00000546378 PHF21BQ96EK2 531 aa15.02■□□□□ -0
HOXC11-202ENST00000546378 FDXACB1Q9BRP7 624 aaPredicted RBP15.02■□□□□ -0
HOXC11-202ENST00000546378 GOLGA2P5Q9HBQ8 144 aa15.02■□□□□ -0
HOXC11-202ENST00000546378 THAP1Q9NVV9 213 aa15.02■□□□□ -0
HOXC11-202ENST00000546378 HESX1Q9UBX0 185 aa15.02■□□□□ -0
HOXC11-202ENST00000546378 NUDT5Q9UKK9 219 aa15.02■□□□□ -0
HOXC11-202ENST00000546378 TIMM13Q9Y5L4 95 aaPredicted RBP15.02■□□□□ -0
HOXC11-202ENST00000546378 AP4B1Q9Y6B7 739 aa15.02■□□□□ -0
HOXC11-202ENST00000546378 SOWAHBA6NEL2 793 aa15.02□□□□□ -0.01
HOXC11-202ENST00000546378 GOLGA8CPA6NN73 597 aa15.02□□□□□ -0.01
HOXC11-202ENST00000546378 LIN7AO14910 233 aaPredicted RBP15.02□□□□□ -0.01
HOXC11-202ENST00000546378 LDHAP00338 332 aaKnown RBP15.02□□□□□ -0.01
HOXC11-202ENST00000546378 JUNP05412 331 aaKnown RBP15.02□□□□□ -0.01
HOXC11-202ENST00000546378 NET1Q7Z628 596 aaPredicted RBP15.02□□□□□ -0.01
HOXC11-202ENST00000546378 CCDC185Q8N715 623 aa15.02□□□□□ -0.01
HOXC11-202ENST00000546378 C1orf127Q8N9H9 656 aa15.02□□□□□ -0.01
HOXC11-202ENST00000546378 TDRD5Q8NAT2 981 aaKnown RBP15.02□□□□□ -0.01
HOXC11-202ENST00000546378 TFB1MQ8WVM0 346 aaKnown RBP15.02□□□□□ -0.01
HOXC11-202ENST00000546378 DCUN1D1Q96GG9 259 aa15.02□□□□□ -0.01
HOXC11-202ENST00000546378 ZNF512Q96ME7 567 aaPredicted RBP15.02□□□□□ -0.01
HOXC11-202ENST00000546378 CIB1Q99828 191 aa15.02□□□□□ -0.01
HOXC11-202ENST00000546378 CCT7Q99832 543 aa15.02□□□□□ -0.01
HOXC11-202ENST00000546378 DPEP3Q9H4B8 488 aa15.02□□□□□ -0.01
HOXC11-202ENST00000546378 NRBP2Q9NSY0 501 aa15.02□□□□□ -0.01
HOXC11-202ENST00000546378 LMCD1Q9NZU5 365 aa15.02□□□□□ -0.01
HOXC11-202ENST00000546378 ADAMTS5Q9UNA0 930 aa15.02□□□□□ -0.01
HOXC11-202ENST00000546378 C3orf70A6NLC5 250 aaPredicted RBP15.02□□□□□ -0.01
HOXC11-202ENST00000546378 A8MXQ7 604 aa15.02□□□□□ -0.01
HOXC11-202ENST00000546378 SLC26A4O43511 780 aa15.02□□□□□ -0.01
HOXC11-202ENST00000546378 GSTA2P09210 222 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms