RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 KIAA0895Q8NCT3 520 aa15.32■□□□□ 0.04
RTN3-214ENST00000545432 TAS1R2Q8TE23 839 aa15.32■□□□□ 0.04
RTN3-214ENST00000545432 TTC9Q92623 222 aa15.32■□□□□ 0.04
RTN3-214ENST00000545432 BLZF1Q9H2G9 400 aa15.32■□□□□ 0.04
RTN3-214ENST00000545432 ARHGAP20Q9P2F6 1191 aa15.32■□□□□ 0.04
RTN3-214ENST00000545432 TRAF3IP3Q9Y228 551 aa15.32■□□□□ 0.04
RTN3-214ENST00000545432 ATMQ13315 3056 aa15.32■□□□□ 0.04
RTN3-214ENST00000545432 HECTD1Q9ULT8 2610 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 PLXNA2O75051 1894 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 MID1O15344 667 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 IRAK2O43187 625 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 LZTS3O60299 673 aaPredicted RBP15.31■□□□□ 0.04
RTN3-214ENST00000545432 CUTAO60888 179 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 RNASEH1O60930 286 aaKnown RBP15.31■□□□□ 0.04
RTN3-214ENST00000545432 KIF20AO95235 890 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 MT-CO3P00414 261 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 NR3C1P04150 777 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 GOT1P17174 413 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 PIK3CAP42336 1068 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 TKTL1P51854 596 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 RAD23BP54727 409 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 UCNP55089 124 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 PPP3CAQ08209 521 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 OVGP1Q12889 678 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 ZNF211Q13398 564 aaPredicted RBP15.31■□□□□ 0.04
RTN3-214ENST00000545432 CUL4BQ13620 913 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 NFIL3Q16649 462 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 FAM133BQ5BKY9 247 aaKnown RBP15.31■□□□□ 0.04
RTN3-214ENST00000545432 HEXIM2Q96MH2 286 aaKnown RBP15.31■□□□□ 0.04
RTN3-214ENST00000545432 ULBP1Q9BZM6 244 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 SEMA4CQ9C0C4 833 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 DNAI2Q9GZS0 605 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 AASDHPPTQ9NRN7 309 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 ITIH6Q6UXX5 1313 aa15.31■□□□□ 0.04
RTN3-214ENST00000545432 A0A1W2PP55 124 aa15.3■□□□□ 0.04
RTN3-214ENST00000545432 C6P13671 934 aa15.3■□□□□ 0.04
RTN3-214ENST00000545432 SLC8A1P32418 973 aa15.3■□□□□ 0.04
RTN3-214ENST00000545432 NUDT1P36639 197 aa15.3■□□□□ 0.04
RTN3-214ENST00000545432 VAMP7P51809 220 aa15.3■□□□□ 0.04
RTN3-214ENST00000545432 ERVPABLB-1P60509 514 aa15.3■□□□□ 0.04
RTN3-214ENST00000545432 STK38Q15208 465 aa15.3■□□□□ 0.04
RTN3-214ENST00000545432 BSPRYQ5W0U4 402 aa15.3■□□□□ 0.04
RTN3-214ENST00000545432 NAPEPLDQ6IQ20 393 aa15.3■□□□□ 0.04
RTN3-214ENST00000545432 MSANTD2Q6P1R3 559 aa15.3■□□□□ 0.04
RTN3-214ENST00000545432 IGF2-ASQ6U949 168 aa15.3■□□□□ 0.04
RTN3-214ENST00000545432 LSMEM2Q8N112 164 aa15.3■□□□□ 0.04
RTN3-214ENST00000545432 AADATQ8N5Z0 425 aa15.3■□□□□ 0.04
RTN3-214ENST00000545432 NDRG1Q92597 394 aaKnown RBP15.3■□□□□ 0.04
RTN3-214ENST00000545432 SERAC1Q96JX3 654 aa15.3■□□□□ 0.04
RTN3-214ENST00000545432 IMPG2Q9BZV3 1241 aa15.3■□□□□ 0.04
RTN3-214ENST00000545432 KDM4CQ9H3R0 1056 aa15.3■□□□□ 0.04
RTN3-214ENST00000545432 CLMPQ9H6B4 373 aa15.3■□□□□ 0.04
RTN3-214ENST00000545432 ABCC13Q9NSE7 274 aa15.3■□□□□ 0.04
RTN3-214ENST00000545432 SFMBT1Q9UHJ3 866 aa15.3■□□□□ 0.04
RTN3-214ENST00000545432 FAM47DPA6NHR8 397 aa15.29■□□□□ 0.04
RTN3-214ENST00000545432 YJEFN3A6XGL0 299 aa15.29■□□□□ 0.04
RTN3-214ENST00000545432 E7ENQ6 273 aa15.29■□□□□ 0.04
RTN3-214ENST00000545432 TULP2O00295 520 aa15.29■□□□□ 0.04
RTN3-214ENST00000545432 TRIM38O00635 465 aa15.29■□□□□ 0.04
RTN3-214ENST00000545432 XPO1O14980 1071 aaKnown RBP15.29■□□□□ 0.04
RTN3-214ENST00000545432 POLR2DO15514 142 aaKnown RBP15.29■□□□□ 0.04
RTN3-214ENST00000545432 CLSTN1O94985 981 aa15.29■□□□□ 0.04
RTN3-214ENST00000545432 YEATS4O95619 227 aa15.29■□□□□ 0.04
RTN3-214ENST00000545432 SRPRAP08240 638 aaKnown RBP15.29■□□□□ 0.04
RTN3-214ENST00000545432 CD58P19256 250 aa15.29■□□□□ 0.04
RTN3-214ENST00000545432 C5AR1P21730 350 aa15.29■□□□□ 0.04
RTN3-214ENST00000545432 SLC6A4P31645 630 aa15.29■□□□□ 0.04
RTN3-214ENST00000545432 GCLMP48507 274 aa15.29■□□□□ 0.04
RTN3-214ENST00000545432 ADPRHP54922 357 aa15.29■□□□□ 0.04
RTN3-214ENST00000545432 PCBP4P57723 403 aaKnown RBP15.29■□□□□ 0.04
RTN3-214ENST00000545432 TMPRSS3P57727 454 aa15.29■□□□□ 0.04
RTN3-214ENST00000545432 SKOR1P84550 965 aa15.29■□□□□ 0.04
RTN3-214ENST00000545432 TAF1BQ53T94 588 aaPredicted RBP15.29■□□□□ 0.04
RTN3-214ENST00000545432 SLC45A4Q5BKX6 768 aa15.29■□□□□ 0.04
RTN3-214ENST00000545432 SND1Q7KZF4 910 aaKnown RBP eCLIP15.29■□□□□ 0.04
RTN3-214ENST00000545432 SLC25A45Q8N413 288 aa15.29■□□□□ 0.04
RTN3-214ENST00000545432 KCTD13Q8WZ19 329 aa15.29■□□□□ 0.04
RTN3-214ENST00000545432 DPH1Q9BZG8 443 aa15.29■□□□□ 0.04
RTN3-214ENST00000545432 SIGLEC6O43699 453 aa15.28■□□□□ 0.04
RTN3-214ENST00000545432 RNASEH2AO75792 299 aaKnown RBP15.28■□□□□ 0.04
RTN3-214ENST00000545432 NEFLP07196 543 aa15.28■□□□□ 0.04
RTN3-214ENST00000545432 GIMD1P0DJR0 217 aa15.28■□□□□ 0.04
RTN3-214ENST00000545432 GTF2H1P32780 548 aa15.28■□□□□ 0.04
RTN3-214ENST00000545432 DRD3P35462 400 aa15.28■□□□□ 0.04
RTN3-214ENST00000545432 CSKP41240 450 aa15.28■□□□□ 0.04
RTN3-214ENST00000545432 LSSP48449 732 aa15.28■□□□□ 0.04
RTN3-214ENST00000545432 ST8SIA6P61647 398 aa15.28■□□□□ 0.04
RTN3-214ENST00000545432 ZNF394Q53GI3 561 aa15.28■□□□□ 0.04
RTN3-214ENST00000545432 RFWD3Q6PCD5 774 aa15.28■□□□□ 0.04
RTN3-214ENST00000545432 INTS8Q75QN2 995 aaKnown RBP15.28■□□□□ 0.04
RTN3-214ENST00000545432 MMAAQ8IVH4 418 aaKnown RBP15.28■□□□□ 0.04
RTN3-214ENST00000545432 UNC45BQ8IWX7 931 aa15.28■□□□□ 0.04
RTN3-214ENST00000545432 DHX40Q8IX18 779 aaKnown RBP15.28■□□□□ 0.04
RTN3-214ENST00000545432 GANCQ8TET4 914 aa15.28■□□□□ 0.04
RTN3-214ENST00000545432 PTPRN2Q92932 1015 aa15.28■□□□□ 0.04
RTN3-214ENST00000545432 INTS4Q96HW7 963 aaKnown RBP15.28■□□□□ 0.04
RTN3-214ENST00000545432 LGMNQ99538 433 aa15.28■□□□□ 0.04
RTN3-214ENST00000545432 OMDQ99983 421 aa15.28■□□□□ 0.04
RTN3-214ENST00000545432 CISHQ9NSE2 258 aa15.28■□□□□ 0.04
RTN3-214ENST00000545432 DMTF1Q9Y222 760 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms