RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 PI4K2BG5E9Z4 385 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 FAM72CH0Y354 149 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 GFRA2O00451 464 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 HOXC11O43248 304 aaPredicted RBP13.4□□□□□ -0.26
CDCA3-210ENST00000545368 ZRANB2O95218 330 aaKnown RBP eCLIP13.4□□□□□ -0.26
CDCA3-210ENST00000545368 TYRP14679 529 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 GOT1P17174 413 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 KDELR1P24390 212 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 HOXC13P31276 330 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 MARCKSL1P49006 195 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 SGSHP51688 502 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 RPS24P62847 133 aaKnown RBP13.4□□□□□ -0.26
CDCA3-210ENST00000545368 AMPD2Q01433 879 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 DPYSL3Q14195 570 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 C5orf22Q49AR2 442 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 FAM72AQ5TYM5 149 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 FYB2Q5VWT5 728 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 FAM72DQ6L9T8 149 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 RHBDF2Q6PJF5 856 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 FAM72BQ86X60 149 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 VSIG1Q86XK7 387 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 ZNF683Q8IZ20 524 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 GJD3Q8N144 294 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 CFAP52Q8N1V2 620 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 EXD1Q8NHP7 514 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 IGSF8Q969P0 613 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 RNF25Q96BH1 459 aaPredicted RBP13.4□□□□□ -0.26
CDCA3-210ENST00000545368 XPO6Q96QU8 1125 aaKnown RBP13.4□□□□□ -0.26
CDCA3-210ENST00000545368 MAGEB5Q9BZ81 275 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 RETREG1Q9H6L5 497 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 TRPV5Q9NQA5 729 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 DONSONQ9NYP3 566 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 GTSE1Q9NYZ3 720 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 DUSP12Q9UNI6 340 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 C5orf42Q9H799 3197 aa13.4□□□□□ -0.26
CDCA3-210ENST00000545368 COL4A2P08572 1712 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 ZNF487B1APH4 448 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 H0Y626 953 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 ARNTLO00327 626 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 DDX3YO15523 660 aaKnown RBP13.39□□□□□ -0.27
CDCA3-210ENST00000545368 CLDN11O75508 207 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 PENKP01210 267 aaPredicted RBP13.39□□□□□ -0.27
CDCA3-210ENST00000545368 RHOQP17081 205 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 HOXD9P28356 352 aaPredicted RBP13.39□□□□□ -0.27
CDCA3-210ENST00000545368 HCAR3P49019 387 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 PEX5P50542 639 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 ARSEP51690 589 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 CDH4P55283 916 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 COPS2P61201 443 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 CDH18Q13634 790 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 SEL1L2Q5TEA6 688 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 CHST9Q7L1S5 443 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 CIR1Q86X95 450 aaPredicted RBP13.39□□□□□ -0.27
CDCA3-210ENST00000545368 RNF135Q8IUD6 432 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 MFN1Q8IWA4 741 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 RCOR2Q8IZ40 523 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 CARNMT1Q8N4J0 409 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 TTC8Q8TAM2 541 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 FAM71BQ8TC56 605 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.39□□□□□ -0.27
CDCA3-210ENST00000545368 RAPGEF5Q92565 580 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 MYEOVQ96EZ4 313 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 CSPG4P5Q96PW8 444 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 MAK16Q9BXY0 300 aaKnown RBP13.39□□□□□ -0.27
CDCA3-210ENST00000545368 SLC2A4RGQ9NR83 387 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 PLK2Q9NYY3 685 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 MPP6Q9NZW5 540 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 CWC15Q9P013 229 aaKnown RBP13.39□□□□□ -0.27
CDCA3-210ENST00000545368 COL4A3Q01955 1670 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 DOCK4Q8N1I0 1966 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 MYO10Q9HD67 2058 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 PRUNE2Q8WUY3 3088 aa13.39□□□□□ -0.27
CDCA3-210ENST00000545368 MYOFQ9NZM1 2061 aa13.38□□□□□ -0.27
CDCA3-210ENST00000545368 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.38□□□□□ -0.27
CDCA3-210ENST00000545368 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.38□□□□□ -0.27
CDCA3-210ENST00000545368 NARSO43776 548 aaKnown RBP13.38□□□□□ -0.27
CDCA3-210ENST00000545368 CACNG3O60359 315 aa13.38□□□□□ -0.27
CDCA3-210ENST00000545368 LUC7L3O95232 432 aaKnown RBP13.38□□□□□ -0.27
CDCA3-210ENST00000545368 CD48P09326 243 aa13.38□□□□□ -0.27
CDCA3-210ENST00000545368 ERCC2P18074 760 aa13.38□□□□□ -0.27
CDCA3-210ENST00000545368 OR1E1P30953 314 aa13.38□□□□□ -0.27
CDCA3-210ENST00000545368 MAPKAPK2P49137 400 aa13.38□□□□□ -0.27
CDCA3-210ENST00000545368 OXCT1P55809 520 aa13.38□□□□□ -0.27
CDCA3-210ENST00000545368 ZNF177Q13360 481 aaPredicted RBP13.38□□□□□ -0.27
CDCA3-210ENST00000545368 PREPLQ4J6C6 727 aaPredicted RBP13.38□□□□□ -0.27
CDCA3-210ENST00000545368 ALFQ53S48 1182 aa13.38□□□□□ -0.27
CDCA3-210ENST00000545368 TFDP3Q5H9I0 405 aa13.38□□□□□ -0.27
CDCA3-210ENST00000545368 C6orf118Q5T5N4 469 aa13.38□□□□□ -0.27
CDCA3-210ENST00000545368 SPOCD1Q6ZMY3 1216 aa13.38□□□□□ -0.27
CDCA3-210ENST00000545368 TFAP2DQ7Z6R9 452 aa13.38□□□□□ -0.27
CDCA3-210ENST00000545368 TSC1Q92574 1164 aa13.38□□□□□ -0.27
CDCA3-210ENST00000545368 ALG3Q92685 438 aa13.38□□□□□ -0.27
CDCA3-210ENST00000545368 EXOC4Q96A65 974 aa13.38□□□□□ -0.27
CDCA3-210ENST00000545368 MSANTD3Q96H12 275 aa13.38□□□□□ -0.27
CDCA3-210ENST00000545368 C16orf45Q96MC5 204 aaPredicted RBP13.38□□□□□ -0.27
CDCA3-210ENST00000545368 NAPGQ99747 312 aaPredicted RBP13.38□□□□□ -0.27
CDCA3-210ENST00000545368 TLR10Q9BXR5 811 aa13.38□□□□□ -0.27
CDCA3-210ENST00000545368 C8orf33Q9H7E9 229 aaPredicted RBP13.38□□□□□ -0.27
CDCA3-210ENST00000545368 DNAJC17Q9NVM6 304 aaKnown RBP13.38□□□□□ -0.27
CDCA3-210ENST00000545368 TMEM248Q9NWD8 314 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms