RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 ALKBH8Q96BT7 664 aaKnown RBP13.15□□□□□ -0.3
PDZD4-209ENST00000544474 LENG8Q96PV6 779 aaPredicted RBP13.15□□□□□ -0.3
PDZD4-209ENST00000544474 SHOC2Q9UQ13 582 aa13.15□□□□□ -0.3
PDZD4-209ENST00000544474 RNF103-CHMP3A0A140T963 221 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 ARHGEF37A1IGU5 675 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 PMM2O15305 246 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 CSH1P0DML2 217 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 CSH2P0DML3 217 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 PSMC3P17980 439 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 XRCC1P18887 633 aaPredicted RBP13.14□□□□□ -0.31
PDZD4-209ENST00000544474 HMOX2P30519 316 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 SLC18A1P54219 525 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 ROR1Q01973 937 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 PTP4A2Q12974 167 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 NDUFA5Q16718 116 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 GEN1Q17RS7 908 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 EFHC2Q5JST6 749 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 GPR107Q5VW38 600 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 SWSAP1Q6NVH7 229 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 C11orf74Q86VG3 221 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 PSD4Q8NDX1 1056 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 OR5B17Q8NGF7 314 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 RPL10LQ96L21 214 aaKnown RBP13.14□□□□□ -0.31
PDZD4-209ENST00000544474 CAB39LQ9H9S4 337 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 TBC1D22BQ9NU19 505 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 FAM49BQ9NUQ9 324 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 GABBR1Q9UBS5 961 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 STRCQ7RTU9 1775 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 AKAP10O43572 662 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 ZBTB11O95625 1053 aaPredicted RBP13.14□□□□□ -0.31
PDZD4-209ENST00000544474 ARSAP15289 507 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 NPR1P16066 1061 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 PRPSAP1Q14558 356 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 NR1D2Q14995 579 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 HADHQ16836 314 aaKnown RBP13.14□□□□□ -0.31
PDZD4-209ENST00000544474 MTX3Q5HYI7 312 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 OR6B2Q6IFH4 312 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 NIPAL1Q6NVV3 410 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 SLC26A11Q86WA9 606 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 TMEM161BQ8NDZ6 487 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 DCPSQ96C86 337 aaKnown RBP13.14□□□□□ -0.31
PDZD4-209ENST00000544474 NPAS2Q99743 824 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 VTA1Q9NP79 307 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 RBAKQ9NYW8 714 aaPredicted RBP13.14□□□□□ -0.31
PDZD4-209ENST00000544474 WARS2Q9UGM6 360 aaKnown RBP13.14□□□□□ -0.31
PDZD4-209ENST00000544474 CDK5RAP2Q96SN8 1893 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 NOTOA8MTQ0 251 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 HDCP19113 662 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 RBL1P28749 1068 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 CDK9P50750 372 aaKnown RBP13.14□□□□□ -0.31
PDZD4-209ENST00000544474 NME3Q13232 169 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 DPYSL3Q14195 570 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 DLG2Q15700 870 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 DCAF6Q58WW2 860 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 HABP4Q5JVS0 413 aaKnown RBP13.14□□□□□ -0.31
PDZD4-209ENST00000544474 ADGRD1Q6QNK2 874 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 ABRAQ8N0Z2 381 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 AHI1Q8N157 1196 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 NLGN1Q8N2Q7 840 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 ATP6V1E2Q96A05 226 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 RCN3Q96D15 328 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 MAGEB5Q9BZ81 275 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 EHD1Q9H4M9 534 aa13.14□□□□□ -0.31
PDZD4-209ENST00000544474 SOX17Q9H6I2 414 aaPredicted RBP13.14□□□□□ -0.31
PDZD4-209ENST00000544474 PTPN1P18031 435 aaKnown RBP13.13□□□□□ -0.31
PDZD4-209ENST00000544474 IL1R2P27930 398 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 GSSP48637 474 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 PLIN5Q00G26 463 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 FAM102AQ5T9C2 384 aaPredicted RBP13.13□□□□□ -0.31
PDZD4-209ENST00000544474 TTC39BQ5VTQ0 682 aaPredicted RBP13.13□□□□□ -0.31
PDZD4-209ENST00000544474 MON1BQ7L1V2 547 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 PODNQ7Z5L7 613 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 MAP4K3Q8IVH8 894 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 TSPAN14Q8NG11 270 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 TRIM8Q9BZR9 551 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 PCDH9Q9HC56 1237 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 CYP26B1Q9NR63 512 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 ATRNL1Q5VV63 1379 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 YDJCA8MPS7 323 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 MAN1A2O60476 641 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 KCNA2P16389 499 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 TSPAN8P19075 237 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 CDKL1Q00532 357 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 GNA12Q03113 381 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 TKFCQ3LXA3 575 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 EGFLAMQ63HQ2 1017 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 OFCC1Q8IZS5 231 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 PQLC1Q8N2U9 271 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 PDZD8Q8NEN9 1154 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 MASTLQ96GX5 879 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 PLEKHA8Q96JA3 519 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 WDR83Q9BRX9 315 aaKnown RBP13.13□□□□□ -0.31
PDZD4-209ENST00000544474 IDI2Q9BXS1 227 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 STRIP2Q9ULQ0 834 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 MYO18AQ92614 2054 aaKnown RBP13.13□□□□□ -0.31
PDZD4-209ENST00000544474 hCG_1818297A0A087WSY0 165 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 PFDN6O15212 129 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 DENRO43583 198 aaKnown RBP13.13□□□□□ -0.31
PDZD4-209ENST00000544474 KRT75O95678 551 aa13.13□□□□□ -0.31
PDZD4-209ENST00000544474 THRAP10827 490 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms