RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 TDRD5Q8NAT2 981 aaKnown RBP12.85□□□□□ -0.35
SMCR5-201ENST00000543475 UBA3Q8TBC4 463 aa12.85□□□□□ -0.35
SMCR5-201ENST00000543475 KCNN1Q92952 543 aa12.85□□□□□ -0.35
SMCR5-201ENST00000543475 PCDH18Q9HCL0 1135 aa12.85□□□□□ -0.35
SMCR5-201ENST00000543475 PIH1D1Q9NWS0 290 aaKnown RBP12.85□□□□□ -0.35
SMCR5-201ENST00000543475 ZNF646O15015 1829 aaPredicted RBP12.85□□□□□ -0.35
SMCR5-201ENST00000543475 A0A1B0GTW7 788 aa12.85□□□□□ -0.35
SMCR5-201ENST00000543475 NEMP1O14524 444 aa12.85□□□□□ -0.35
SMCR5-201ENST00000543475 OATP04181 439 aa12.85□□□□□ -0.35
SMCR5-201ENST00000543475 MS4A2Q01362 244 aa12.85□□□□□ -0.35
SMCR5-201ENST00000543475 PTPN11Q06124 597 aaPredicted RBP12.85□□□□□ -0.35
SMCR5-201ENST00000543475 MTA1Q13330 715 aa12.85□□□□□ -0.35
SMCR5-201ENST00000543475 CAPSQ13938 189 aa12.85□□□□□ -0.35
SMCR5-201ENST00000543475 SURF1Q15526 300 aa12.85□□□□□ -0.35
SMCR5-201ENST00000543475 CCDC153Q494R4 210 aa12.85□□□□□ -0.35
SMCR5-201ENST00000543475 ZNF667Q5HYK9 610 aa12.85□□□□□ -0.35
SMCR5-201ENST00000543475 STEAP4Q687X5 459 aa12.85□□□□□ -0.35
SMCR5-201ENST00000543475 ZPBP2Q6X784 338 aa12.85□□□□□ -0.35
SMCR5-201ENST00000543475 LRRC43Q8N309 656 aa12.85□□□□□ -0.35
SMCR5-201ENST00000543475 FNDC8Q8TC99 324 aa12.85□□□□□ -0.35
SMCR5-201ENST00000543475 PDCD6IPQ8WUM4 868 aaKnown RBP12.85□□□□□ -0.35
SMCR5-201ENST00000543475 DLG3Q92796 817 aa12.85□□□□□ -0.35
SMCR5-201ENST00000543475 EME1Q96AY2 570 aa12.85□□□□□ -0.35
SMCR5-201ENST00000543475 ANKRD36BP1Q96IX9 119 aa12.85□□□□□ -0.35
SMCR5-201ENST00000543475 BLOC1S6Q9UL45 172 aa12.85□□□□□ -0.35
SMCR5-201ENST00000543475 OGTO15294 1046 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 GLDCP23378 1020 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 SESN2P58004 480 aaPredicted RBP12.84□□□□□ -0.35
SMCR5-201ENST00000543475 OSTNP61366 133 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 CREB5Q02930 508 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 PPP2R5DQ14738 602 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 NRF1Q16656 503 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 BSPRYQ5W0U4 402 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 LPCAT2Q7L5N7 544 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 RP9Q8TA86 221 aaKnown RBP12.84□□□□□ -0.35
SMCR5-201ENST00000543475 SREK1Q8WXA9 508 aaKnown RBP12.84□□□□□ -0.35
SMCR5-201ENST00000543475 RCN3Q96D15 328 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 TWNKQ96RR1 684 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 WDR55Q9H6Y2 383 aaPredicted RBP12.84□□□□□ -0.35
SMCR5-201ENST00000543475 LIN28AQ9H9Z2 209 aaKnown RBP12.84□□□□□ -0.35
SMCR5-201ENST00000543475 ZNF302Q9NR11 478 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 RNF146Q9NTX7 359 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 HMGXB4Q9UGU5 601 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 CNTNAP1P78357 1384 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 XPO1O14980 1071 aaKnown RBP12.84□□□□□ -0.35
SMCR5-201ENST00000543475 ZNF23P17027 643 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 ME2P23368 584 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 TCF7P36402 384 aaPredicted RBP12.84□□□□□ -0.35
SMCR5-201ENST00000543475 GARSP41250 739 aaKnown RBP12.84□□□□□ -0.35
SMCR5-201ENST00000543475 GPD2P43304 727 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 SLC10A2Q12908 348 aaPredicted RBP12.84□□□□□ -0.35
SMCR5-201ENST00000543475 CEACAM7Q14002 265 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 CA9Q16790 459 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 NAPRTQ6XQN6 538 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 CMC1Q7Z7K0 106 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 RNF168Q8IYW5 571 aaPredicted RBP12.84□□□□□ -0.35
SMCR5-201ENST00000543475 LPAR1Q92633 364 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 PIWIL1Q96J94 861 aaKnown RBP12.84□□□□□ -0.35
SMCR5-201ENST00000543475 MRPL4Q9BYD3 311 aaKnown RBP12.84□□□□□ -0.35
SMCR5-201ENST00000543475 INO80BQ9C086 356 aaPredicted RBP12.84□□□□□ -0.35
SMCR5-201ENST00000543475 SH3GLB1Q9Y371 365 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 PCDHGA4Q9Y5G9 962 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 HEMK1Q9Y5R4 338 aaPredicted RBP12.84□□□□□ -0.35
SMCR5-201ENST00000543475 TRIP11Q15643 1979 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 CROCCQ5TZA2 2017 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 PRSS51A0A1B0GVH4 220 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 HOXC6P09630 235 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 CDK9P50750 372 aaKnown RBP12.84□□□□□ -0.35
SMCR5-201ENST00000543475 GBE1Q04446 702 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 ART3Q13508 389 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 SEMA5AQ13591 1074 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 HEATR6Q6AI08 1181 aaKnown RBP12.84□□□□□ -0.35
SMCR5-201ENST00000543475 TMIGD2Q96BF3 282 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 CDHR1Q96JP9 859 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 HEXIM2Q96MH2 286 aaKnown RBP12.84□□□□□ -0.35
SMCR5-201ENST00000543475 SNRNP25Q9BV90 132 aaKnown RBP12.84□□□□□ -0.35
SMCR5-201ENST00000543475 SLC4A5Q9BY07 1137 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 SLC2A11Q9BYW1 496 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 VPS33BQ9H267 617 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 WDR41Q9HAD4 459 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 TMEM165Q9HC07 324 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 RRN3Q9NYV6 651 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 VPS28Q9UK41 221 aa12.84□□□□□ -0.35
SMCR5-201ENST00000543475 TDRKHQ9Y2W6 561 aaKnown RBP12.84□□□□□ -0.35
SMCR5-201ENST00000543475 H0YIN7 160 aa12.83□□□□□ -0.36
SMCR5-201ENST00000543475 AMHP03971 560 aa12.83□□□□□ -0.36
SMCR5-201ENST00000543475 TCN1P20061 433 aaPredicted RBP12.83□□□□□ -0.36
SMCR5-201ENST00000543475 CYP2F1P24903 491 aa12.83□□□□□ -0.36
SMCR5-201ENST00000543475 MGAT1P26572 445 aa12.83□□□□□ -0.36
SMCR5-201ENST00000543475 NUMBP49757 651 aa12.83□□□□□ -0.36
SMCR5-201ENST00000543475 CBX3Q13185 183 aa12.83□□□□□ -0.36
SMCR5-201ENST00000543475 CCDC14Q49A88 953 aa12.83□□□□□ -0.36
SMCR5-201ENST00000543475 POTEHQ6S545 545 aa12.83□□□□□ -0.36
SMCR5-201ENST00000543475 FAM183BPQ6ZVS7 135 aa12.83□□□□□ -0.36
SMCR5-201ENST00000543475 CROCCP3Q8IVE0 287 aa12.83□□□□□ -0.36
SMCR5-201ENST00000543475 PGAM4Q8N0Y7 254 aa12.83□□□□□ -0.36
SMCR5-201ENST00000543475 NSUN6Q8TEA1 469 aaKnown RBP12.83□□□□□ -0.36
SMCR5-201ENST00000543475 ATXN7L3BQ96GX2 97 aa12.83□□□□□ -0.36
SMCR5-201ENST00000543475 TMEM176AQ96HP8 235 aa12.83□□□□□ -0.36
SMCR5-201ENST00000543475 CNDP1Q96KN2 507 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms