RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 CFAP57Q96MR6 1250 aa15.97■□□□□ 0.15
ECHDC2-223ENST00000542552 HINFPQ9BQA5 517 aa15.97■□□□□ 0.15
ECHDC2-223ENST00000542552 TKTL2Q9H0I9 626 aa15.97■□□□□ 0.15
ECHDC2-223ENST00000542552 TMEM245Q9H330 911 aa15.97■□□□□ 0.15
ECHDC2-223ENST00000542552 WDCPQ9H6R7 721 aa15.97■□□□□ 0.15
ECHDC2-223ENST00000542552 PARD6AQ9NPB6 346 aa15.97■□□□□ 0.15
ECHDC2-223ENST00000542552 METTL5Q9NRN9 209 aaKnown RBP15.97■□□□□ 0.15
ECHDC2-223ENST00000542552 BCCIPQ9P287 314 aaKnown RBP eCLIP15.97■□□□□ 0.15
ECHDC2-223ENST00000542552 INVSQ9Y283 1065 aa15.97■□□□□ 0.15
ECHDC2-223ENST00000542552 HS3ST4Q9Y661 456 aa15.97■□□□□ 0.15
ECHDC2-223ENST00000542552 RALGAPA1Q6GYQ0 2036 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 TCRBV5S1A1TA0A578 114 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 C2CD4BA6NLJ0 364 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 GOLGA6L19H0YKK7 550 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 EPN2O95208 641 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 CALB1P05937 261 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 DLDP09622 509 aaKnown RBP15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 NDUFV2P19404 249 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 BCKDHBP21953 392 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 PRKCHP24723 683 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 PRKCIP41743 596 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 ATXN1P54253 815 aaKnown RBP15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 UBASH3AP57075 661 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 C1QBPQ07021 282 aaKnown RBP15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 RABGAP1LQ5R372 815 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 E4F1Q66K89 784 aaPredicted RBP15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 SND1Q7KZF4 910 aaKnown RBP eCLIP15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 C14orf80Q86SX3 495 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 ZNF683Q8IZ20 524 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 CARNMT1Q8N4J0 409 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 EMC1Q8N766 993 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 CYB5D2Q8WUJ1 264 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 RLN3Q8WXF3 142 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 IGSF8Q969P0 613 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 MRGPRX1Q96LB2 322 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 C1orf74Q96LT6 269 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 MBD1Q9UIS9 605 aaPredicted RBP15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 PLA2G4CQ9UP65 541 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 PAXBP1Q9Y5B6 917 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 THADAQ6YHU6 1953 aa15.96■□□□□ 0.15
ECHDC2-223ENST00000542552 A0A1B0GVM2 712 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 TCAF2A6NFQ2 919 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 RHOBTB1O94844 696 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 ATP5BP06576 529 aaKnown RBP15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 POLR2EP19388 210 aaKnown RBP15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 CSKP41240 450 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 PTPN9P43378 593 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 SLC12A1Q13621 1099 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 CDH18Q13634 790 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 BYSLQ13895 437 aaKnown RBP15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 STARD3Q14849 445 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 ELF2Q15723 593 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 CCDC14Q49A88 953 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 ACBD5Q5T8D3 534 aaPredicted RBP15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 PMS2CLQ68D20 193 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 ACAD10Q6JQN1 1059 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 PHLDB2Q86SQ0 1253 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 METTL3Q86U44 580 aaKnown RBP15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 KIAA2013Q8IYS2 634 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 CCAR2Q8N163 923 aaKnown RBP15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 PGBD3Q8N328 593 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 FRMD1Q8N878 549 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 C3orf20Q8ND61 904 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 JOSD2Q8TAC2 188 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 RXFP2Q8WXD0 754 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 CENPIQ92674 756 aaPredicted RBP15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 MYO19Q96H55 970 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 KIAA1522Q9P206 1035 aaPredicted RBP15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 VANGL2Q9ULK5 521 aa15.95■□□□□ 0.14
ECHDC2-223ENST00000542552 A0A1W2PQJ5 194 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 SIGLEC16A6NMB1 481 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 H0Y626 953 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 GJB6O95452 261 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 ASLP04424 464 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 KRT3P12035 628 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 PDGFRAP16234 1089 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 RDXP35241 583 aaKnown RBP15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 RFC1P35251 1148 aaPredicted RBP15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 IRAK1P51617 712 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 PLK1P53350 603 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 COPAP53621 1224 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 SPEM2Q0P670 501 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 CAMK2GQ13555 558 aaPredicted RBP15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 ASIC2Q16515 512 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 FNDC3BQ53EP0 1204 aaKnown RBP15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 PITRM1Q5JRX3 1037 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 PLA2G2CQ5R387 149 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 PPP1R15BQ5SWA1 713 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 SFMBT2Q5VUG0 894 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 CXorf57Q6NSI4 855 aaKnown RBP15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 SERPINA13PQ6UXR4 307 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 ZNF571Q7Z3V5 609 aaPredicted RBP15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 CIR1Q86X95 450 aaPredicted RBP15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 CCDC117Q8IWD4 279 aaPredicted RBP15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 KDM1BQ8NB78 822 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 ERLEC1Q96DZ1 483 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 MRGPRX3Q96LB0 322 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 RPRD1AQ96P16 312 aaPredicted RBP15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 HAPLN3Q96S86 360 aa15.94■□□□□ 0.14
ECHDC2-223ENST00000542552 NUP58Q9BVL2 599 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms