RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 SNX11Q9Y5W9 270 aa20.61■□□□□ 0.89
DDX11-220ENST00000542244 BICDL2A1A5D9 508 aa20.6■□□□□ 0.89
DDX11-220ENST00000542244 TTC34A8MYJ7 566 aa20.6■□□□□ 0.89
DDX11-220ENST00000542244 CAMK4Q16566 473 aa20.6■□□□□ 0.89
DDX11-220ENST00000542244 MARCH9Q86YJ5 346 aa20.6■□□□□ 0.89
DDX11-220ENST00000542244 LGI2Q8N0V4 545 aa20.6■□□□□ 0.89
DDX11-220ENST00000542244 HJURPQ8NCD3 748 aaPredicted RBP20.6■□□□□ 0.89
DDX11-220ENST00000542244 EBF2Q9HAK2 575 aa20.6■□□□□ 0.89
DDX11-220ENST00000542244 TM9SF3Q9HD45 589 aa20.6■□□□□ 0.89
DDX11-220ENST00000542244 SLCO3A1Q9UIG8 710 aa20.6■□□□□ 0.89
DDX11-220ENST00000542244 PCOLCE2Q9UKZ9 415 aa20.6■□□□□ 0.89
DDX11-220ENST00000542244 MSRB2Q9Y3D2 182 aa20.6■□□□□ 0.89
DDX11-220ENST00000542244 FAM170AA1A519 330 aa20.59■□□□□ 0.89
DDX11-220ENST00000542244 TAF4O00268 1085 aa20.59■□□□□ 0.89
DDX11-220ENST00000542244 IRAK2O43187 625 aa20.59■□□□□ 0.89
DDX11-220ENST00000542244 THAP12O43422 761 aa20.59■□□□□ 0.89
DDX11-220ENST00000542244 FSBPO95073 299 aa20.59■□□□□ 0.89
DDX11-220ENST00000542244 SEMA4FO95754 770 aa20.59■□□□□ 0.89
DDX11-220ENST00000542244 IGLV3-25P01717 112 aa20.59■□□□□ 0.89
DDX11-220ENST00000542244 FTH1P19P0C7X4 201 aa20.59■□□□□ 0.89
DDX11-220ENST00000542244 PPP1R2P41236 205 aa20.59■□□□□ 0.89
DDX11-220ENST00000542244 IRAK1P51617 712 aa20.59■□□□□ 0.89
DDX11-220ENST00000542244 CETN1Q12798 172 aa20.59■□□□□ 0.89
DDX11-220ENST00000542244 SLC14A1Q13336 389 aa20.59■□□□□ 0.89
DDX11-220ENST00000542244 EIF4EBP2Q13542 120 aaPredicted RBP20.59■□□□□ 0.89
DDX11-220ENST00000542244 ARHGAP44Q17R89 818 aa20.59■□□□□ 0.89
DDX11-220ENST00000542244 PITRM1Q5JRX3 1037 aa20.59■□□□□ 0.89
DDX11-220ENST00000542244 PASD1Q8IV76 773 aa20.59■□□□□ 0.89
DDX11-220ENST00000542244 GOLGA1Q92805 767 aa20.59■□□□□ 0.89
DDX11-220ENST00000542244 SERPINB11Q96P15 392 aa20.59■□□□□ 0.89
DDX11-220ENST00000542244 RSPH9Q9H1X1 276 aaPredicted RBP20.59■□□□□ 0.89
DDX11-220ENST00000542244 SRRM3A6NNA2 597 aaPredicted RBP20.58■□□□□ 0.89
DDX11-220ENST00000542244 CAPNS1P04632 268 aa20.58■□□□□ 0.89
DDX11-220ENST00000542244 IGHV4-34P06331 123 aa20.58■□□□□ 0.89
DDX11-220ENST00000542244 ATP5BP06576 529 aaKnown RBP20.58■□□□□ 0.89
DDX11-220ENST00000542244 PNMA6AP0CW24 399 aaPredicted RBP20.58■□□□□ 0.89
DDX11-220ENST00000542244 VAV1P15498 845 aa20.58■□□□□ 0.89
DDX11-220ENST00000542244 GNA15P30679 374 aa20.58■□□□□ 0.89
DDX11-220ENST00000542244 STK19P49842 368 aaPredicted RBP20.58■□□□□ 0.89
DDX11-220ENST00000542244 C9orf64Q5T6V5 341 aa20.58■□□□□ 0.89
DDX11-220ENST00000542244 TRIM65Q6PJ69 517 aa20.58■□□□□ 0.89
DDX11-220ENST00000542244 TMEM110Q86TL2 294 aa20.58■□□□□ 0.89
DDX11-220ENST00000542244 SETD7Q8WTS6 366 aaKnown RBP20.58■□□□□ 0.89
DDX11-220ENST00000542244 ZCCHC14Q8WYQ9 949 aaKnown RBP20.58■□□□□ 0.89
DDX11-220ENST00000542244 RPL10LQ96L21 214 aaKnown RBP20.58■□□□□ 0.89
DDX11-220ENST00000542244 CPXM1Q96SM3 734 aa20.58■□□□□ 0.89
DDX11-220ENST00000542244 FAM129BQ96TA1 746 aa20.58■□□□□ 0.89
DDX11-220ENST00000542244 TM7SF3Q9NS93 570 aa20.58■□□□□ 0.89
DDX11-220ENST00000542244 TOR4AQ9NXH8 423 aa20.58■□□□□ 0.89
DDX11-220ENST00000542244 ERVW-1Q9UQF0 538 aa20.58■□□□□ 0.89
DDX11-220ENST00000542244 WNT9AO14904 365 aa20.57■□□□□ 0.88
DDX11-220ENST00000542244 MID1O15344 667 aa20.57■□□□□ 0.88
DDX11-220ENST00000542244 GRAP2O75791 330 aa20.57■□□□□ 0.88
DDX11-220ENST00000542244 LUC7L3O95232 432 aaKnown RBP20.57■□□□□ 0.88
DDX11-220ENST00000542244 GNA14O95837 355 aa20.57■□□□□ 0.88
DDX11-220ENST00000542244 TRUB2O95900 331 aaKnown RBP20.57■□□□□ 0.88
DDX11-220ENST00000542244 DNTTP04053 509 aa20.57■□□□□ 0.88
DDX11-220ENST00000542244 TACR2P21452 398 aa20.57■□□□□ 0.88
DDX11-220ENST00000542244 MATKP42679 507 aa20.57■□□□□ 0.88
DDX11-220ENST00000542244 METAP1P53582 386 aa20.57■□□□□ 0.88
DDX11-220ENST00000542244 PDCLQ13371 301 aa20.57■□□□□ 0.88
DDX11-220ENST00000542244 HNRNPA1L2Q32P51 320 aaKnown RBP20.57■□□□□ 0.88
DDX11-220ENST00000542244 ZNF776Q68DI1 518 aaPredicted RBP20.57■□□□□ 0.88
DDX11-220ENST00000542244 CREBRFQ8IUR6 639 aa20.57■□□□□ 0.88
DDX11-220ENST00000542244 OR52K2Q8NGK3 314 aa20.57■□□□□ 0.88
DDX11-220ENST00000542244 BAHD1Q8TBE0 780 aaPredicted RBP20.57■□□□□ 0.88
DDX11-220ENST00000542244 PRMT1Q99873 361 aaKnown RBP20.57■□□□□ 0.88
DDX11-220ENST00000542244 ZDHHC5Q9C0B5 715 aa20.57■□□□□ 0.88
DDX11-220ENST00000542244 BTBD1Q9H0C5 482 aa20.57■□□□□ 0.88
DDX11-220ENST00000542244 PABPC3Q9H361 631 aaKnown RBP20.57■□□□□ 0.88
DDX11-220ENST00000542244 SIX2Q9NPC8 291 aa20.57■□□□□ 0.88
DDX11-220ENST00000542244 SYNJ2BP-COX16A0A087WUM0 186 aa20.56■□□□□ 0.88
DDX11-220ENST00000542244 FAM221BA6H8Z2 402 aa20.56■□□□□ 0.88
DDX11-220ENST00000542244 FAM47DPA6NHR8 397 aa20.56■□□□□ 0.88
DDX11-220ENST00000542244 ATXN1LP0C7T5 689 aaKnown RBP20.56■□□□□ 0.88
DDX11-220ENST00000542244 MZF1P28698 734 aaPredicted RBP20.56■□□□□ 0.88
DDX11-220ENST00000542244 GGCXP38435 758 aa20.56■□□□□ 0.88
DDX11-220ENST00000542244 USP8P40818 1118 aa20.56■□□□□ 0.88
DDX11-220ENST00000542244 ACADSBP45954 432 aa20.56■□□□□ 0.88
DDX11-220ENST00000542244 IL9RQ01113 521 aa20.56■□□□□ 0.88
DDX11-220ENST00000542244 NNTQ13423 1086 aa20.56■□□□□ 0.88
DDX11-220ENST00000542244 CDH18Q13634 790 aa20.56■□□□□ 0.88
DDX11-220ENST00000542244 PRAMEF14Q5SWL7 426 aa20.56■□□□□ 0.88
DDX11-220ENST00000542244 DBX2Q6ZNG2 339 aa20.56■□□□□ 0.88
DDX11-220ENST00000542244 CHSY1Q86X52 802 aa20.56■□□□□ 0.88
DDX11-220ENST00000542244 MMAAQ8IVH4 418 aaKnown RBP20.56■□□□□ 0.88
DDX11-220ENST00000542244 STK32AQ8WU08 396 aa20.56■□□□□ 0.88
DDX11-220ENST00000542244 NEUROG2Q9H2A3 272 aa20.56■□□□□ 0.88
DDX11-220ENST00000542244 COX16Q9P0S2 106 aa20.56■□□□□ 0.88
DDX11-220ENST00000542244 SUN2Q9UH99 717 aa20.56■□□□□ 0.88
DDX11-220ENST00000542244 ANKRD6Q9Y2G4 727 aa20.56■□□□□ 0.88
DDX11-220ENST00000542244 TMEM131Q92545 1883 aa20.56■□□□□ 0.88
DDX11-220ENST00000542244 A0A1W2PP55 124 aa20.55■□□□□ 0.88
DDX11-220ENST00000542244 H0Y8X5 98 aa20.55■□□□□ 0.88
DDX11-220ENST00000542244 PLK4O00444 970 aa20.55■□□□□ 0.88
DDX11-220ENST00000542244 CAPN9O14815 690 aa20.55■□□□□ 0.88
DDX11-220ENST00000542244 WNT1P04628 370 aa20.55■□□□□ 0.88
DDX11-220ENST00000542244 GALCP54803 685 aa20.55■□□□□ 0.88
DDX11-220ENST00000542244 YWHAZP63104 245 aaKnown RBP20.55■□□□□ 0.88
DDX11-220ENST00000542244 CENPCQ03188 943 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms