RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 C3orf70A6NLC5 250 aaPredicted RBP3.62□□□□□ -1.83
USP28-210ENST00000542033 J3KRW8 73 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 M0QYT0 321 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 PRYO14603 147 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 ALDOAP04075 364 aaKnown RBP3.62□□□□□ -1.83
USP28-210ENST00000542033 CD63P08962 238 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 VEGFAP15692 232 aaPredicted RBP3.62□□□□□ -1.83
USP28-210ENST00000542033 STAT6P42226 847 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 ARHGAP25P42331 645 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 RBM6P78332 1123 aaKnown RBP3.62□□□□□ -1.83
USP28-210ENST00000542033 TLE3Q04726 772 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 SEC23BQ15437 767 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 TAF12Q16514 161 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 TIGD6Q17RP2 521 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 TRIM60Q495X7 471 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 MTX3Q5HYI7 312 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 HYIQ5T013 277 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 MORN5Q5VZ52 161 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 LAS2Q8IYD9 372 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 OR4N4Q8N0Y3 316 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 GALNT15Q8N3T1 639 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 ADPRHL1Q8NDY3 354 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 OR1N1Q8NGS0 311 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 ZNF398Q8TD17 642 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 ASB12Q8WXK4 309 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 CPT1BQ92523 772 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 CELF1Q92879 486 aaKnown RBP3.62□□□□□ -1.83
USP28-210ENST00000542033 MAP4K1Q92918 833 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 CUL5Q93034 780 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 C3orf49Q96BT1 292 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 ZNF845Q96IR2 970 aaPredicted RBP3.62□□□□□ -1.83
USP28-210ENST00000542033 MAP7D2Q96T17 732 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 SORBS1Q9BX66 1292 aaKnown RBP3.62□□□□□ -1.83
USP28-210ENST00000542033 QTRT1Q9BXR0 403 aaKnown RBP3.62□□□□□ -1.83
USP28-210ENST00000542033 PABPC3Q9H361 631 aaKnown RBP3.62□□□□□ -1.83
USP28-210ENST00000542033 UNC45AQ9H3U1 944 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 PRDM8Q9NQV8 689 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 RAB21Q9UL25 225 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 TRPC5Q9UL62 973 aaPredicted RBP3.62□□□□□ -1.83
USP28-210ENST00000542033 C19orf53Q9UNZ5 99 aaPredicted RBP3.62□□□□□ -1.83
USP28-210ENST00000542033 SLC12A4Q9UP95 1085 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 ZBTB1Q9Y2K1 713 aa3.62□□□□□ -1.83
USP28-210ENST00000542033 FAM90A18PA6NE21 464 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 FAM90A16PA6NEW6 464 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 RRN3P2A6NIE6 340 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 TTC36A6NLP5 189 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 FAM90A9PA6NNJ1 464 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 SLC38A8A6NNN8 435 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 FAM90A5PA8MXJ8 464 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 KCNU1A8MYU2 1149 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 INO80B-WBP1J3KQ70 363 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 EIF3FO00303 357 aaPredicted RBP3.61□□□□□ -1.83
USP28-210ENST00000542033 PLAUP00749 431 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 ENO1P06733 434 aaKnown RBP3.61□□□□□ -1.83
USP28-210ENST00000542033 FAM90A15PP0C7V4 464 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 FAM90A14PP0C7W9 464 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 TAS2R50P59544 299 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 RPL15P61313 204 aaKnown RBP3.61□□□□□ -1.83
USP28-210ENST00000542033 YPEL5P62699 121 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 HSF1Q00613 529 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 SLC20A2Q08357 652 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 MTA1Q13330 715 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 POSTNQ15063 836 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 TBRG1Q3YBR2 411 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 ANXA2RQ3ZCQ2 193 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 SUPT20HL1Q3ZLR7 823 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 MEX3CQ5U5Q3 659 aaKnown RBP3.61□□□□□ -1.83
USP28-210ENST00000542033 ZNF626Q68DY1 528 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 TANGO2Q6ICL3 276 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 LIN54Q6MZP7 749 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 CASC1Q6TDU7 716 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 DHRS13Q6UX07 377 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 SLC39A5Q6ZMH5 540 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 FAM43BQ6ZT52 329 aaPredicted RBP3.61□□□□□ -1.83
USP28-210ENST00000542033 MAATS1Q7Z4T9 603 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 PRSS3P2Q8NHM4 247 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 OTUD7AQ8TE49 926 aaPredicted RBP3.61□□□□□ -1.83
USP28-210ENST00000542033 KAT2BQ92831 832 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 TRMT61AQ96FX7 289 aaKnown RBP3.61□□□□□ -1.83
USP28-210ENST00000542033 GPR78Q96P69 363 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 TRAPPC9Q96Q05 1148 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 FCRL5Q96RD9 977 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 EIF2AK1Q9BQI3 630 aaKnown RBP3.61□□□□□ -1.83
USP28-210ENST00000542033 FAM167BQ9BTA0 163 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 ABHD14AQ9BUJ0 271 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 MECRQ9BV79 373 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 TMX4Q9H1E5 349 aaPredicted RBP3.61□□□□□ -1.83
USP28-210ENST00000542033 VPS16Q9H269 839 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 YY1AP1Q9H869 796 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 MLXIPQ9HAP2 919 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 NDUFAF4Q9P032 175 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 ZNF70Q9UC06 446 aaPredicted RBP3.61□□□□□ -1.83
USP28-210ENST00000542033 IPO11Q9UI26 975 aaKnown RBP3.61□□□□□ -1.83
USP28-210ENST00000542033 FBXO2Q9UK22 296 aaPredicted RBP3.61□□□□□ -1.83
USP28-210ENST00000542033 BAG5Q9UL15 447 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 DAPP1Q9UN19 280 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 B3GNT3Q9Y2A9 372 aa3.61□□□□□ -1.83
USP28-210ENST00000542033 CYP2D7A0A087X1C5 515 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.6□□□□□ -1.83
USP28-210ENST00000542033 WDR91A4D1P6 747 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms