RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 RABGGTAQ92696 567 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 ARL8AQ96BM9 186 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 NLRP4Q96MN2 994 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 SH2D3AQ9BRG2 576 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 TMEM60Q9H2L4 133 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 DHX33Q9H6R0 707 aaKnown RBP5.88□□□□□ -1.47
CPSF7-220ENST00000541963 TMEM161AQ9NX61 479 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 MOCS1Q9NZB8 636 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 CALCOCO1Q9P1Z2 691 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 PCDHB1Q9Y5F3 818 aa5.88□□□□□ -1.47
CPSF7-220ENST00000541963 A0A0U1RQF3 1178 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 ARHGEF35A5YM69 484 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 TMEM150BA6NC51 233 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 CAPN8A6NHC0 703 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 H3BNC9 293 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 B3GALT2O43825 422 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 ERLIN2O94905 339 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 ALDH2P05091 517 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 HSP90AA1P07900 732 aaKnown RBP5.87□□□□□ -1.47
CPSF7-220ENST00000541963 AXLP30530 894 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 CTNNB1P35222 781 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 BMPR1AP36894 532 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 RARRES1P49788 294 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 TOB1P50616 345 aaPredicted RBP5.87□□□□□ -1.47
CPSF7-220ENST00000541963 DSC2Q02487 901 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 CREMQ03060 361 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 LAMTOR4Q0VGL1 99 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 BIRC2Q13490 618 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 EMC2Q15006 297 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 SURF1Q15526 300 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 AAK1Q2M2I8 961 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 ANO6Q4KMQ2 910 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 EPC2Q52LR7 807 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 ARL6IP4Q66PJ3 421 aaKnown RBP5.87□□□□□ -1.47
CPSF7-220ENST00000541963 TWF2Q6IBS0 349 aaKnown RBP5.87□□□□□ -1.47
CPSF7-220ENST00000541963 ARHGEF18Q6ZSZ5 1173 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 Q6ZVL8 140 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 OVCH2Q7RTZ1 564 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 HSCBQ8IWL3 235 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 HACE1Q8IYU2 909 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 C4orf32Q8N8J7 132 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 RNF149Q8NC42 400 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 CNNM3Q8NE01 707 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 PJA1Q8NG27 643 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 PIGOQ8TEQ8 1089 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 HOXB13Q92826 284 aaPredicted RBP5.87□□□□□ -1.47
CPSF7-220ENST00000541963 PPP2R3CQ969Q6 453 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 SNX21Q969T3 373 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 TMEM143Q96AN5 459 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 ZNF689Q96CS4 500 aaPredicted RBP5.87□□□□□ -1.47
CPSF7-220ENST00000541963 PGBD4Q96DM1 585 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 NT5C3AQ9H0P0 336 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 LMAN2LQ9H0V9 348 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 LDAHQ9H6V9 325 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 LMBRD1Q9NUN5 540 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 WRAP73Q9P2S5 460 aaPredicted RBP5.87□□□□□ -1.47
CPSF7-220ENST00000541963 TRPS1Q9UHF7 1281 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 MTUS1Q9ULD2 1270 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 COG5Q9UP83 839 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 FAM50BQ9Y247 325 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 MTCH2Q9Y6C9 303 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 ADGRA3Q8IWK6 1321 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 LOXHD1Q8IVV2 1947 aa5.87□□□□□ -1.47
CPSF7-220ENST00000541963 TTC3P53804 2025 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 PMS2P1A4D2B8 440 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 VPS37CA5D8V6 355 aaPredicted RBP5.86□□□□□ -1.47
CPSF7-220ENST00000541963 TBKBP1A7MCY6 615 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 C5orf67F2Z3F1 127 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 H3BUI4 141 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 INO80B-WBP1J3KQ70 363 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 TPP1O14773 563 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 SLC26A4O43511 780 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 NCK2O43639 380 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 RRP9O43818 475 aaKnown RBP5.86□□□□□ -1.47
CPSF7-220ENST00000541963 MGEA5O60502 916 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 MED24O75448 989 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 HRGP04196 525 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 RHCEP18577 417 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 CYP11B2P19099 503 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 DDCP20711 480 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 ARL2P36404 184 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 MAP2K6P52564 334 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 HK3P52790 923 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 RHDQ02161 417 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 APBA1Q02410 837 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 DRP2Q13474 957 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 FGL2Q14314 439 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 KHDC1Q4VXA5 237 aaKnown RBP5.86□□□□□ -1.47
CPSF7-220ENST00000541963 L1TD1Q5T7N2 865 aaKnown RBP5.86□□□□□ -1.47
CPSF7-220ENST00000541963 NT5DC1Q5TFE4 455 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 NPNTQ6UXI9 565 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 ECHDC2Q86YB7 292 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 ZBTB8OSQ8IWT0 167 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 ZDHHC14Q8IZN3 488 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 TP53I13Q8NBR0 393 aaPredicted RBP5.86□□□□□ -1.47
CPSF7-220ENST00000541963 RNF169Q8NCN4 708 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 ZSCAN18Q8TBC5 510 aaPredicted RBP5.86□□□□□ -1.47
CPSF7-220ENST00000541963 ATXN2LQ8WWM7 1075 aaKnown RBP5.86□□□□□ -1.47
CPSF7-220ENST00000541963 P2RX5Q93086 422 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 MBD6Q96DN6 1003 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms