RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 DCLK1O15075 740 aa8.95□□□□□ -0.98
THBS3-210ENST00000541576 CPP00450 1065 aa8.95□□□□□ -0.98
THBS3-210ENST00000541576 APOEP02649 317 aa8.95□□□□□ -0.98
THBS3-210ENST00000541576 ERCC2P18074 760 aa8.95□□□□□ -0.98
THBS3-210ENST00000541576 EPHB2P29323 1055 aa8.95□□□□□ -0.98
THBS3-210ENST00000541576 STIP1P31948 543 aaKnown RBP8.95□□□□□ -0.98
THBS3-210ENST00000541576 GCKP35557 465 aa8.95□□□□□ -0.98
THBS3-210ENST00000541576 MAGEA10P43363 369 aaPredicted RBP8.95□□□□□ -0.98
THBS3-210ENST00000541576 ITGA8P53708 1063 aa8.95□□□□□ -0.98
THBS3-210ENST00000541576 UBE3AQ05086 875 aa8.95□□□□□ -0.98
THBS3-210ENST00000541576 DHX9Q08211 1270 aaKnown RBP8.95□□□□□ -0.98
THBS3-210ENST00000541576 SNX30Q5VWJ9 437 aa8.95□□□□□ -0.98
THBS3-210ENST00000541576 PLPP4Q5VZY2 271 aa8.95□□□□□ -0.98
THBS3-210ENST00000541576 RHBDF2Q6PJF5 856 aa8.95□□□□□ -0.98
THBS3-210ENST00000541576 ITIH5Q86UX2 942 aa8.95□□□□□ -0.98
THBS3-210ENST00000541576 ZNF276Q8N554 614 aa8.95□□□□□ -0.98
THBS3-210ENST00000541576 MREGQ8N565 214 aa8.95□□□□□ -0.98
THBS3-210ENST00000541576 TXLNGYQ9BZA5 131 aa8.95□□□□□ -0.98
THBS3-210ENST00000541576 FAM129AQ9BZQ8 928 aa8.95□□□□□ -0.98
THBS3-210ENST00000541576 NACA2Q9H009 215 aa8.95□□□□□ -0.98
THBS3-210ENST00000541576 VIPAS39Q9H9C1 493 aa8.95□□□□□ -0.98
THBS3-210ENST00000541576 USP29Q9HBJ7 922 aa8.95□□□□□ -0.98
THBS3-210ENST00000541576 TLR9Q9NR96 1032 aa8.95□□□□□ -0.98
THBS3-210ENST00000541576 UXTQ9UBK9 157 aaPredicted RBP8.95□□□□□ -0.98
THBS3-210ENST00000541576 SLC12A8A0AV02 714 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 CFAP69A5D8W1 941 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 C2orf71A6NGG8 1288 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 HIDE1A8MVS5 230 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 MFSD11O43934 449 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 SRGAP2BP0DMP2 458 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 DNAJB1P25685 340 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 LSP1P33241 339 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 KPNA1P52294 538 aaPredicted RBP8.94□□□□□ -0.98
THBS3-210ENST00000541576 XRCC4Q13426 336 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 UAP1Q16222 522 aaPredicted RBP8.94□□□□□ -0.98
THBS3-210ENST00000541576 SPRED3Q2MJR0 410 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 HECTD3Q5T447 861 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 FAM109BQ6ICB4 259 aaPredicted RBP8.94□□□□□ -0.98
THBS3-210ENST00000541576 PDZD4Q76G19 769 aaPredicted RBP8.94□□□□□ -0.98
THBS3-210ENST00000541576 TMC3Q7Z5M5 1100 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 SPRED2Q7Z698 418 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 CDKL3Q8IVW4 592 aaPredicted RBP8.94□□□□□ -0.98
THBS3-210ENST00000541576 IQCKQ8N0W5 287 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 MRPL43Q8N983 215 aaKnown RBP8.94□□□□□ -0.98
THBS3-210ENST00000541576 BBOF1Q8ND07 529 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 MICAL1Q8TDZ2 1067 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 ZNF473Q8WTR7 871 aaKnown RBP8.94□□□□□ -0.98
THBS3-210ENST00000541576 PSMG2Q969U7 264 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 PWWP2AQ96N64 755 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 SLC40A1Q9NP59 571 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 MTRF1LQ9UGC7 380 aaKnown RBP8.94□□□□□ -0.98
THBS3-210ENST00000541576 SLC12A6Q9UHW9 1150 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 XPO7Q9UIA9 1087 aaKnown RBP8.94□□□□□ -0.98
THBS3-210ENST00000541576 CHD9Q3L8U1 2897 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 LAMA3Q16787 3333 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 PDE4DIPQ5VU43 2346 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 CCDC85CA6NKD9 419 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 C5orf67F2Z3F1 127 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 CHUKO15111 745 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 ARHGEF15O94989 841 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 RB1P06400 928 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 CA3P07451 260 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 HMBSP08397 361 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 ATP5C1P36542 298 aaKnown RBP8.94□□□□□ -0.98
THBS3-210ENST00000541576 PPP3CCP48454 512 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 GPS1Q13098 491 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 PAFAH1B3Q15102 231 aaKnown RBP8.94□□□□□ -0.98
THBS3-210ENST00000541576 SHHQ15465 462 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 P3H1Q32P28 736 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 RWDD4Q6NW29 188 aaKnown RBP8.94□□□□□ -0.98
THBS3-210ENST00000541576 LILRA6Q6PI73 481 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 CCDC149Q6ZUS6 474 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 CCT8L2Q96SF2 557 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 DNMT3LQ9UJW3 386 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 ANAPC5Q9UJX4 755 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 HS3ST4Q9Y661 456 aa8.94□□□□□ -0.98
THBS3-210ENST00000541576 BCLAF3A2AJT9 711 aaKnown RBP8.93□□□□□ -0.98
THBS3-210ENST00000541576 KCNN4O15554 427 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 LPXNO60711 386 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 GLUD1P00367 558 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 LRG1P02750 347 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 C8AP07357 584 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 RBL1P28749 1068 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 HTR7P34969 479 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 RPL22P35268 128 aaKnown RBP8.93□□□□□ -0.98
THBS3-210ENST00000541576 HSD17B3P37058 310 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 RING1Q06587 406 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 SLC45A4Q5BKX6 768 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 UBAP2Q5T6F2 1119 aaKnown RBP8.93□□□□□ -0.98
THBS3-210ENST00000541576 IZUMO3Q5VZ72 239 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 KLHDC10Q6PID8 442 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 TP53INP2Q8IXH6 220 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 TAB3Q8N5C8 712 aaPredicted RBP8.93□□□□□ -0.98
THBS3-210ENST00000541576 ATP6V0D2Q8N8Y2 350 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 KREMEN2Q8NCW0 462 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 LRRC45Q96CN5 670 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 BTN2A3PQ96KV6 586 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 C1orf74Q96LT6 269 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 OLFM3Q96PB7 478 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 HBS1LQ9Y450 684 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms