RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 TTC39CQ8N584 583 aa10.71□□□□□ -0.69
CHFR-219ENST00000541341 COLGALT1Q8NBJ5 622 aa10.71□□□□□ -0.69
CHFR-219ENST00000541341 SMRP1Q8NCR6 262 aa10.71□□□□□ -0.69
CHFR-219ENST00000541341 ICA1LQ8NDH6 482 aa10.71□□□□□ -0.69
CHFR-219ENST00000541341 B4GALNT2Q8NHY0 566 aa10.71□□□□□ -0.69
CHFR-219ENST00000541341 TTC8Q8TAM2 541 aa10.71□□□□□ -0.69
CHFR-219ENST00000541341 SLC35B2Q8TB61 432 aa10.71□□□□□ -0.69
CHFR-219ENST00000541341 PPP4R1Q8TF05 950 aa10.71□□□□□ -0.69
CHFR-219ENST00000541341 SLC44A1Q8WWI5 657 aa10.71□□□□□ -0.69
CHFR-219ENST00000541341 ATG4AQ8WYN0 398 aa10.71□□□□□ -0.69
CHFR-219ENST00000541341 E2F7Q96AV8 911 aa10.71□□□□□ -0.69
CHFR-219ENST00000541341 CATSPER2Q96P56 530 aa10.71□□□□□ -0.69
CHFR-219ENST00000541341 CBWD1Q9BRT8 395 aa10.71□□□□□ -0.69
CHFR-219ENST00000541341 PCIF1Q9H4Z3 704 aa10.71□□□□□ -0.69
CHFR-219ENST00000541341 RSAD1Q9HA92 442 aa10.71□□□□□ -0.69
CHFR-219ENST00000541341 SLCO1B3Q9NPD5 702 aa10.71□□□□□ -0.69
CHFR-219ENST00000541341 TLR9Q9NR96 1032 aa10.71□□□□□ -0.69
CHFR-219ENST00000541341 THAP1Q9NVV9 213 aa10.71□□□□□ -0.69
CHFR-219ENST00000541341 PAK5Q9P286 719 aa10.71□□□□□ -0.69
CHFR-219ENST00000541341 TDRD15B5MCY1 1934 aaKnown RBP10.7□□□□□ -0.7
CHFR-219ENST00000541341 hCG_1818297A0A087WSY0 165 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 TMEM191CA6NGB0 347 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 HIDE1A8MVS5 230 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 H0YJX3 145 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 H2AFYO75367 372 aaKnown RBP10.7□□□□□ -0.7
CHFR-219ENST00000541341 PDGFBP01127 241 aaPredicted RBP10.7□□□□□ -0.7
CHFR-219ENST00000541341 TMEM191BP0C7N4 346 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 IMPDH2P12268 514 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 GM2AP17900 193 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 MMP8P22894 467 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 ADRA1DP25100 572 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 RPL5P46777 297 aaKnown RBP10.7□□□□□ -0.7
CHFR-219ENST00000541341 VPS41P49754 854 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 SERPINB8P50452 374 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 SESN3P58005 492 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 ZXDAP98168 799 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 CDC42EP1Q00587 391 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 PPARDQ03181 441 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 CUL2Q13617 745 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 CYLC2Q14093 348 aaPredicted RBP10.7□□□□□ -0.7
CHFR-219ENST00000541341 MXD4Q14582 209 aaPredicted RBP10.7□□□□□ -0.7
CHFR-219ENST00000541341 ZACNQ401N2 412 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 BORAQ6PGQ7 559 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 C15orf39Q6ZRI6 1047 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 TRIM67Q6ZTA4 783 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 RASSF3Q86WH2 238 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 IFNLR1Q8IU57 520 aaPredicted RBP10.7□□□□□ -0.7
CHFR-219ENST00000541341 RBM12BQ8IXT5 1001 aaKnown RBP10.7□□□□□ -0.7
CHFR-219ENST00000541341 LRRC71Q8N4P6 559 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 CCDC33Q8N5R6 958 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 NAT8LQ8N9F0 302 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 OR6Y1Q8NGX8 325 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 FAM172AQ8WUF8 416 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 NDNQ99608 321 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 FERMT1Q9BQL6 677 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 HAUS8Q9BT25 410 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 HEMGNQ9BXL5 484 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 MAK16Q9BXY0 300 aaKnown RBP10.7□□□□□ -0.7
CHFR-219ENST00000541341 NFKBIZQ9BYH8 718 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 CWH43Q9H720 699 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 NRDE2Q9H7Z3 1164 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 ENTPD7Q9NQZ7 604 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 RGS18Q9NS28 235 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 ARL8BQ9NVJ2 186 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 MID2Q9UJV3 735 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 DCTN4Q9UJW0 460 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 GRID1Q9ULK0 1009 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 RAB26Q9ULW5 256 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.7□□□□□ -0.7
CHFR-219ENST00000541341 PDCD11Q14690 1871 aaKnown RBP10.7□□□□□ -0.7
CHFR-219ENST00000541341 DENND4AQ7Z401 1863 aa10.7□□□□□ -0.7
CHFR-219ENST00000541341 EME2A4GXA9 379 aaPredicted RBP10.69□□□□□ -0.7
CHFR-219ENST00000541341 CAPN14A8MX76 684 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 LOC730098B7Z3J9 87 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 C9IYK1 514 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 NT5C1B-RDH14C9J2C7 533 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 APOC4-APOC2K7ER74 178 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 ATMINO43313 823 aaPredicted RBP10.69□□□□□ -0.7
CHFR-219ENST00000541341 CCNT2O60583 730 aaKnown RBP10.69□□□□□ -0.7
CHFR-219ENST00000541341 OPHN1O60890 802 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 AP1G2O75843 785 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 KRT36O76013 467 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 APOC2P02655 101 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 MYL2P10916 166 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 ATF7P17544 494 aaPredicted RBP10.69□□□□□ -0.7
CHFR-219ENST00000541341 GLRA2P23416 452 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 PIK3CAP42336 1068 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 ETV4P43268 484 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 PRKAA2P54646 552 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 PEX3P56589 373 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 MYL6P60660 151 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 SF3A3Q12874 501 aaKnown RBP eCLIP10.69□□□□□ -0.79e-7■■■□□ 17.8
CHFR-219ENST00000541341 MAPK6Q16659 721 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 DUSP6Q16828 381 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 INSCQ1MX18 579 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 RNF220Q5VTB9 566 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 IZUMO2Q6UXV1 221 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 DSTYKQ6XUX3 929 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 TIFABQ6ZNK6 161 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 DHDDSQ86SQ9 333 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms