RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 FEZ2Q9UHY8 353 aaPredicted RBP16.65■□□□□ 0.26
TRAF3-204ENST00000539721 ZMYM5Q9UJ78 669 aa16.65■□□□□ 0.26
TRAF3-204ENST00000539721 ARHGAP26Q9UNA1 814 aa16.65■□□□□ 0.26
TRAF3-204ENST00000539721 DRG1Q9Y295 367 aaKnown RBP16.65■□□□□ 0.26
TRAF3-204ENST00000539721 SH3BP1Q9Y3L3 701 aa16.65■□□□□ 0.26
TRAF3-204ENST00000539721 FAM187AA6NFU0 413 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 H7C0C1 242 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 HEXIM1O94992 359 aaKnown RBP16.64■□□□□ 0.25
TRAF3-204ENST00000539721 LATS1O95835 1130 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 RBP3P10745 1247 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 SLC6A4P31645 630 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 SERPINB6P35237 376 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 ATP5OP48047 213 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 LMNB2Q03252 620 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 SLC10A2Q12908 348 aaPredicted RBP16.64■□□□□ 0.25
TRAF3-204ENST00000539721 OASLQ15646 514 aaKnown RBP16.64■□□□□ 0.25
TRAF3-204ENST00000539721 FAM133BQ5BKY9 247 aaKnown RBP16.64■□□□□ 0.25
TRAF3-204ENST00000539721 ARTNQ5T4W7 220 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 JAMLQ86YT9 394 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 ITFG1Q8TB96 612 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 DDX50Q9BQ39 737 aaKnown RBP16.64■□□□□ 0.25
TRAF3-204ENST00000539721 MPP6Q9NZW5 540 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 DMGDHQ9UI17 866 aaKnown RBP16.64■□□□□ 0.25
TRAF3-204ENST00000539721 IGLV3-10A0A075B6K4 115 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 TARSL2A2RTX5 802 aaKnown RBP16.64■□□□□ 0.25
TRAF3-204ENST00000539721 LEFTY2O00292 366 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 ITGAVP06756 1048 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 ADAM15Q13444 863 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 ADGRF1Q5T601 910 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 RFWD3Q6PCD5 774 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 DARS2Q6PI48 645 aaKnown RBP16.64■□□□□ 0.25
TRAF3-204ENST00000539721 GSTA5Q7RTV2 222 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 GPR149Q86SP6 731 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 DDX42Q86XP3 938 aaKnown RBP eCLIP16.64■□□□□ 0.25
TRAF3-204ENST00000539721 CCDC33Q8N5R6 958 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 SLCO2A1Q92959 643 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 IGSF8Q969P0 613 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 TRIM51Q9BSJ1 452 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 MTCH2Q9Y6C9 303 aa16.64■□□□□ 0.25
TRAF3-204ENST00000539721 NUP210Q8TEM1 1887 aaPredicted RBP16.63■□□□□ 0.25
TRAF3-204ENST00000539721 DRGXA6NNA5 263 aa16.63■□□□□ 0.25
TRAF3-204ENST00000539721 SCAMP3O14828 347 aaKnown RBP16.63■□□□□ 0.25
TRAF3-204ENST00000539721 GREM1O60565 184 aa16.63■□□□□ 0.25
TRAF3-204ENST00000539721 GAS8O95995 478 aa16.63■□□□□ 0.25
TRAF3-204ENST00000539721 RHOQP17081 205 aa16.63■□□□□ 0.25
TRAF3-204ENST00000539721 IRAK1P51617 712 aa16.63■□□□□ 0.25
TRAF3-204ENST00000539721 PPP1R7Q15435 360 aa16.63■□□□□ 0.25
TRAF3-204ENST00000539721 KCTD19Q17RG1 926 aaPredicted RBP16.63■□□□□ 0.25
TRAF3-204ENST00000539721 RABGAP1LQ5R372 815 aa16.63■□□□□ 0.25
TRAF3-204ENST00000539721 SYCE2Q6PIF2 218 aa16.63■□□□□ 0.25
TRAF3-204ENST00000539721 Q6ZNB5 142 aa16.63■□□□□ 0.25
TRAF3-204ENST00000539721 NPWQ8N729 165 aa16.63■□□□□ 0.25
TRAF3-204ENST00000539721 RTL3Q8N8U3 475 aaKnown RBP16.63■□□□□ 0.25
TRAF3-204ENST00000539721 NETO2Q8NC67 525 aa16.63■□□□□ 0.25
TRAF3-204ENST00000539721 HINFPQ9BQA5 517 aa16.63■□□□□ 0.25
TRAF3-204ENST00000539721 TMEM121Q9BTD3 319 aa16.63■□□□□ 0.25
TRAF3-204ENST00000539721 C10orf88Q9H8K7 445 aa16.63■□□□□ 0.25
TRAF3-204ENST00000539721 ZNF510Q9Y2H8 683 aa16.63■□□□□ 0.25
TRAF3-204ENST00000539721 RAD54BQ9Y620 910 aa16.63■□□□□ 0.25
TRAF3-204ENST00000539721 WASH4PA8MWX3 477 aa16.62■□□□□ 0.25
TRAF3-204ENST00000539721 SGK1O00141 431 aa16.62■□□□□ 0.25
TRAF3-204ENST00000539721 CNTN5O94779 1100 aa16.62■□□□□ 0.25
TRAF3-204ENST00000539721 HOXB8P17481 243 aaPredicted RBP16.62■□□□□ 0.25
TRAF3-204ENST00000539721 FSHRP23945 695 aa16.62■□□□□ 0.25
TRAF3-204ENST00000539721 GUCY2DQ02846 1103 aa16.62■□□□□ 0.25
TRAF3-204ENST00000539721 XRCC4Q13426 336 aa16.62■□□□□ 0.25
TRAF3-204ENST00000539721 SYDE1Q6ZW31 735 aaPredicted RBP16.62■□□□□ 0.25
TRAF3-204ENST00000539721 HTR3DQ70Z44 454 aa16.62■□□□□ 0.25
TRAF3-204ENST00000539721 B4GALNT4Q76KP1 1039 aa16.62■□□□□ 0.25
TRAF3-204ENST00000539721 CDKL3Q8IVW4 592 aaPredicted RBP16.62■□□□□ 0.25
TRAF3-204ENST00000539721 ALLCQ8N6M5 410 aa16.62■□□□□ 0.25
TRAF3-204ENST00000539721 SH3RF2Q8TEC5 729 aa16.62■□□□□ 0.25
TRAF3-204ENST00000539721 RSAD2Q8WXG1 361 aa16.62■□□□□ 0.25
TRAF3-204ENST00000539721 USP13Q92995 863 aaPredicted RBP16.62■□□□□ 0.25
TRAF3-204ENST00000539721 MYEOVQ96EZ4 313 aa16.62■□□□□ 0.25
TRAF3-204ENST00000539721 ZSWIM3Q96MP5 696 aa16.62■□□□□ 0.25
TRAF3-204ENST00000539721 OLFM3Q96PB7 478 aa16.62■□□□□ 0.25
TRAF3-204ENST00000539721 RAB17Q9H0T7 212 aa16.62■□□□□ 0.25
TRAF3-204ENST00000539721 TDP1Q9NUW8 608 aa16.62■□□□□ 0.25
TRAF3-204ENST00000539721 TMEM248Q9NWD8 314 aa16.62■□□□□ 0.25
TRAF3-204ENST00000539721 STOML2Q9UJZ1 356 aa16.62■□□□□ 0.25
TRAF3-204ENST00000539721 CCL26Q9Y258 94 aa16.62■□□□□ 0.25
TRAF3-204ENST00000539721 UTP11Q9Y3A2 253 aaKnown RBP16.62■□□□□ 0.25
TRAF3-204ENST00000539721 PRRC2BQ5JSZ5 2229 aaKnown RBP16.62■□□□□ 0.25
TRAF3-204ENST00000539721 TRDMT1O14717 391 aaKnown RBP16.61■□□□□ 0.25
TRAF3-204ENST00000539721 PPP1R12AO14974 1030 aaPredicted RBP16.61■□□□□ 0.25
TRAF3-204ENST00000539721 TSPAN3O60637 253 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 IGFBP4P22692 258 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 CBX2Q14781 532 aaPredicted RBP16.61■□□□□ 0.25
TRAF3-204ENST00000539721 PDK1Q15118 436 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 C5orf22Q49AR2 442 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 ALFQ53S48 1182 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 EP400NLQ6ZTU2 488 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 TFAP2DQ7Z6R9 452 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 NLRP14Q86W24 1093 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 CIR1Q86X95 450 aaPredicted RBP16.61■□□□□ 0.25
TRAF3-204ENST00000539721 LZTR1Q8N653 840 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 CELF6Q96J87 481 aaKnown RBP16.61■□□□□ 0.25
TRAF3-204ENST00000539721 QKIQ96PU8 341 aaKnown RBP eCLIP16.61■□□□□ 0.25
TRAF3-204ENST00000539721 PNKPQ96T60 521 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms