RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 PRG3Q9Y2Y8 225 aaPredicted RBP10.46□□□□□ -0.73
SPARC-209ENST00000539687 WASH4PA8MWX3 477 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 NBNO60934 754 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 SUN1O94901 812 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 METTL18O95568 372 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 MT-ND3P03897 115 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 ITGB1P05556 798 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 VIMP08670 466 aaKnown RBP10.45□□□□□ -0.74
SPARC-209ENST00000539687 VAV1P15498 845 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 PGAM1P18669 254 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 DRD4P21917 467 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 CCNCP24863 283 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 GCAP28676 217 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 GARSP41250 739 aaKnown RBP10.45□□□□□ -0.74
SPARC-209ENST00000539687 SEC24CP53992 1094 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 PITX1P78337 314 aaPredicted RBP10.45□□□□□ -0.74
SPARC-209ENST00000539687 GPR17Q13304 367 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 FRG1Q14331 258 aaKnown RBP10.45□□□□□ -0.74
SPARC-209ENST00000539687 MSS51Q4VC12 460 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 UBAP2Q5T6F2 1119 aaKnown RBP10.45□□□□□ -0.74
SPARC-209ENST00000539687 FAM171A1Q5VUB5 890 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 C1orf53Q5VUE5 145 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 DENND5BQ6ZUT9 1274 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 PID1Q7Z2X4 250 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 CTU1Q7Z7A3 348 aaKnown RBP10.45□□□□□ -0.74
SPARC-209ENST00000539687 SRLQ86TD4 932 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 CAND1Q86VP6 1230 aaKnown RBP10.45□□□□□ -0.74
SPARC-209ENST00000539687 TRIM42Q8IWZ5 723 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 ATP6V0D2Q8N8Y2 350 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 ANKRD42Q8N9B4 389 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 PDZD8Q8NEN9 1154 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 EDEM1Q92611 657 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 FATE1Q969F0 183 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 TTC17Q96AE7 1141 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 CASD1Q96PB1 797 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 TSGA13Q96PP4 275 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 GBA3Q9H227 469 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 TLR8Q9NR97 1041 aaKnown RBP10.45□□□□□ -0.74
SPARC-209ENST00000539687 IL37Q9NZH6 218 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 STK39Q9UEW8 545 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 METRNQ9UJH8 293 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 AAR2Q9Y312 384 aaKnown RBP10.45□□□□□ -0.74
SPARC-209ENST00000539687 PCDHA11Q9Y5I1 949 aa10.45□□□□□ -0.74
SPARC-209ENST00000539687 FAM92AA1XBS5 289 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 EFCAB14O75071 495 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 LRIG2O94898 1065 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 SNRPAP09012 282 aaKnown RBP10.44□□□□□ -0.74
SPARC-209ENST00000539687 CPB1P15086 417 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 CA4P22748 312 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 IGFBP6P24592 240 aaPredicted RBP10.44□□□□□ -0.74
SPARC-209ENST00000539687 YWHAQP27348 245 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 NPY2RP49146 381 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 TUFMP49411 452 aaKnown RBP10.44□□□□□ -0.74
SPARC-209ENST00000539687 DBN1Q16643 649 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 SPANXN3Q5MJ09 141 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 HP1BP3Q5SSJ5 553 aaPredicted RBP10.44□□□□□ -0.74
SPARC-209ENST00000539687 HHATQ5VTY9 493 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 STEAP4Q687X5 459 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 NAPEPLDQ6IQ20 393 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 FUT10Q6P4F1 479 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 CAPN12Q6ZSI9 719 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 CYP4X1Q8N118 509 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 ZNF567Q8N184 647 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 ZNF276Q8N554 614 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 ATPAF2Q8N5M1 289 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 OTUD6BQ8N6M0 293 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 GBP7Q8N8V2 638 aaPredicted RBP10.44□□□□□ -0.74
SPARC-209ENST00000539687 ADAM32Q8TC27 787 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 DCAKDQ8WVC6 231 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 OVCA2Q8WZ82 227 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 CFAP36Q96G28 342 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 SEC16BQ96JE7 1060 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 TMEM209Q96SK2 561 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 LGMNQ99538 433 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 IQCGQ9H095 443 aaKnown RBP10.44□□□□□ -0.74
SPARC-209ENST00000539687 HIPK3Q9H422 1215 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 LRRC40Q9H9A6 602 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 ACTR5Q9H9F9 607 aaPredicted RBP10.44□□□□□ -0.74
SPARC-209ENST00000539687 TMEM30AQ9NV96 361 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 MKS1Q9NXB0 559 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 BFARQ9NZS9 450 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 PPARGC1AQ9UBK2 798 aaKnown RBP10.44□□□□□ -0.74
SPARC-209ENST00000539687 RRP15Q9Y3B9 282 aaKnown RBP10.44□□□□□ -0.74
SPARC-209ENST00000539687 BACE2Q9Y5Z0 518 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 MAD1L1Q9Y6D9 718 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 FAM169AQ9Y6X4 670 aa10.44□□□□□ -0.74
SPARC-209ENST00000539687 KCNU1A8MYU2 1149 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 ANXA9O76027 345 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 ALDH1A2O94788 518 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 MAP3K6O95382 1288 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 ASMTLO95671 621 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 AP2A1O95782 977 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 POLBP06746 335 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 ALADP13716 330 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 PTPN3P26045 913 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 IFNAR2P48551 515 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 NDST2P52849 883 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 RING1Q06587 406 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 WASHC5Q12768 1159 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 ILF2Q12905 390 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms