RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 CITED2Q99967 270 aaPredicted RBP4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 RTKNQ9BST9 563 aa4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 TEX13BQ9BXU2 312 aa4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 TRIM54Q9BYV2 358 aa4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 DPH1Q9BZG8 443 aa4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 TNMDQ9H2S6 317 aa4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 TAF1DQ9H5J8 278 aaPredicted RBP4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 COPS7BQ9H9Q2 264 aaPredicted RBP4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 BRF2Q9HAW0 419 aa4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 NOD2Q9HC29 1040 aa4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 MCM9Q9NXL9 1143 aa4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 PLA2G3Q9NZ20 509 aa4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 NDUFAF4Q9P032 175 aa4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 PCSK1NQ9UHG2 260 aa4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 SCOCQ9UIL1 159 aa4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 MTO1Q9Y2Z2 717 aaKnown RBP4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 CCL27Q9Y4X3 112 aa4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 ANGPTL3Q9Y5C1 460 aa4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 PCDHA3Q9Y5H8 950 aa4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 LYVE1Q9Y5Y7 322 aa4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 PSAT1Q9Y617 370 aa4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 PTPN13Q12923 2485 aa4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 KIF13BQ9NQT8 1826 aa4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 TPRP12270 2363 aaKnown RBP4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 N4BP2Q86UW6 1770 aaPredicted RBP4.06□□□□□ -1.76
AC055720.1-201ENST00000539552 DMXL1Q9Y485 3027 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 FYCO1Q9BQS8 1478 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 WNK3Q9BYP7 1800 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 LAMB2P55268 1798 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 SCN11AQ9UI33 1791 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 RPTORQ8N122 1335 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 IGSF1Q8N6C5 1336 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 A0A0U1RQK1 487 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 ZNF320A2RRD8 509 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 CCDC151A5D8V7 595 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 KRT87PA6NCN2 255 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 BOLA2-SMG1P6H3BVE0 249 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 PRPSAP2O60256 369 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 PPP1R11O60927 126 aaPredicted RBP4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 SNX4O95219 450 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 TNNT1P13805 278 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 ZNF28P17035 718 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 PTPN2P17706 415 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 FGFR4P22455 802 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 ADSLP30566 484 aaPredicted RBP4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 HOXA11P31270 313 aaPredicted RBP4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 TLX1P31314 330 aaPredicted RBP4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 IL13P35225 146 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 TCF7P36402 384 aaPredicted RBP4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 GPC3P51654 580 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 MLLT6P55198 1093 aaPredicted RBP4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 SESN2P58004 480 aaPredicted RBP4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 KLHL30Q0D2K2 578 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 COASYQ13057 564 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 MORF4L2Q15014 288 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 SEC23BQ15437 767 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 OASLQ15646 514 aaKnown RBP4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 DGKDQ16760 1214 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 TXNRD1Q16881 649 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 TRIM71Q2Q1W2 868 aaKnown RBP4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 KHDC1Q4VXA5 237 aaKnown RBP4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 BMP2KLQ5H9B9 411 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 PRR31Q5SQ13 230 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 TAF2Q6P1X5 1199 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 SLC2A7Q6PXP3 512 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 CYP20A1Q6UW02 462 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 ATF7IPQ6VMQ6 1270 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 DENND5BQ6ZUT9 1274 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 SCN4BQ8IWT1 228 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 KLHL36Q8N4N3 616 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 VGLL2Q8N8G2 317 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 ANKRD20A12PQ8NF67 263 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 Q8NFD4 153 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 OR1N1Q8NGS0 311 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 SCAMP5Q8TAC9 235 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 KCNG4Q8TDN1 519 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 SLC22A17Q8WUG5 538 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 MAML1Q92585 1016 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 FAM162AQ96A26 154 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 FOXRED1Q96CU9 486 aaPredicted RBP4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 KTI12Q96EK9 354 aaPredicted RBP4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 LRRC46Q96FV0 321 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 TMX3Q96JJ7 454 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 PPP1R13BQ96KQ4 1090 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 RUNDC3BQ96NL0 473 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 POLR3CQ9BUI4 534 aaPredicted RBP4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 OSBPL6Q9BZF3 934 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 NT5C3AQ9H0P0 336 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 C1orf21Q9H246 121 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 LIN28AQ9H9Z2 209 aaKnown RBP4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 G6PC2Q9NQR9 355 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 GALNT8Q9NY28 637 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 TAS2R10Q9NYW0 307 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 DTLQ9NZJ0 730 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 CALCOCO1Q9P1Z2 691 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 C5AR2Q9P296 337 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 ZNF624Q9P2J8 865 aaPredicted RBP4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 CACNG4Q9UBN1 327 aa4.05□□□□□ -1.76
AC055720.1-201ENST00000539552 EXTL2Q9UBQ6 330 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms