RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 SIT1Q9Y3P8 196 aa13.52□□□□□ -0.25
CHFR-216ENST00000538235 MFHAS1Q9Y4C4 1052 aa13.52□□□□□ -0.25
CHFR-216ENST00000538235 HYOU1Q9Y4L1 999 aa13.52□□□□□ -0.25
CHFR-216ENST00000538235 EPN1Q9Y6I3 576 aaPredicted RBP13.52□□□□□ -0.25
CHFR-216ENST00000538235 SCINQ9Y6U3 715 aa13.52□□□□□ -0.25
CHFR-216ENST00000538235 DUSP10Q9Y6W6 482 aa13.52□□□□□ -0.25
CHFR-216ENST00000538235 ANKRD36A6QL64 1941 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 A0A0A0MRY4 1105 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 E9PAM4 449 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 F5H5T6 163 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 MAN2B1O00754 1011 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 ADAM23O75077 832 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 MTA2O94776 668 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 LRIG2O94898 1065 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 LUC7L3O95232 432 aaKnown RBP13.51□□□□□ -0.25
CHFR-216ENST00000538235 TDGF1P13385 188 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 MZF1P28698 734 aaPredicted RBP13.51□□□□□ -0.25
CHFR-216ENST00000538235 DGKGP49619 791 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 CLCN5P51795 746 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 SMTNL2Q2TAL5 461 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 ATP13A4Q4VNC1 1196 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 GRAMD4Q6IC98 578 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 NLRP14Q86W24 1093 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 APCDD1Q8J025 514 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.51□□□□□ -0.25
CHFR-216ENST00000538235 NETO2Q8NC67 525 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 PRSS33Q8NF86 280 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 SLC35G2Q8TBE7 412 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 USP33Q8TEY7 942 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 RFFLQ8WZ73 363 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 ERLEC1Q96DZ1 483 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 TMA16Q96EY4 203 aaKnown RBP13.51□□□□□ -0.25
CHFR-216ENST00000538235 ALG14Q96F25 216 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 MYO19Q96H55 970 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 SHDQ96IW2 340 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 PDLIM2Q96JY6 352 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 OSBPL6Q9BZF3 934 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 ABCB8Q9NUT2 735 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 CTTNBP2NLQ9P2B4 639 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 SLC27A6Q9Y2P4 619 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 PCDHA13Q9Y5I0 950 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 DMDP11532 3685 aa13.51□□□□□ -0.25
CHFR-216ENST00000538235 TNRC6BQ9UPQ9 1833 aaKnown RBP13.5□□□□□ -0.25
CHFR-216ENST00000538235 VPS13AQ96RL7 3174 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 DRGXA6NNA5 263 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 F9P00740 461 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 SLC2A3P11169 496 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 COL9A1P20849 921 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 CSKP41240 450 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 CTSOP43234 321 aaPredicted RBP13.5□□□□□ -0.25
CHFR-216ENST00000538235 MAGEA1P43355 309 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 SATB1Q01826 763 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 NRG1Q02297 640 aaPredicted RBP13.5□□□□□ -0.25
CHFR-216ENST00000538235 DMWDQ09019 674 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 NR1H3Q13133 447 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 TCEAL1Q15170 157 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 PTPRNQ16849 979 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 KCNT1Q5JUK3 1230 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 DGKKQ5KSL6 1271 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 C10orf76Q5T2E6 689 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 SCYL2Q6P3W7 929 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 TSSK4Q6SA08 328 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 ANKS1BQ7Z6G8 1248 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 TFAP2DQ7Z6R9 452 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 TMTC1Q8IUR5 882 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 CCDC170Q8IYT3 715 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 CARNMT1Q8N4J0 409 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 RPLP0P6Q8NHW5 317 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 CTNNBL1Q8WYA6 563 aaPredicted RBP13.5□□□□□ -0.25
CHFR-216ENST00000538235 RPRD1AQ96P16 312 aaPredicted RBP13.5□□□□□ -0.25
CHFR-216ENST00000538235 HAPLN3Q96S86 360 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 PSMB7Q99436 277 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 C1QTNF1Q9BXJ1 281 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 NOL6Q9H6R4 1146 aaKnown RBP13.5□□□□□ -0.25
CHFR-216ENST00000538235 KLHL11Q9NVR0 708 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 DEC1Q9P2X7 70 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 AP4E1Q9UPM8 1137 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 OR51B4Q9Y5P0 310 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 CEP192Q8TEP8 1941 aa13.5□□□□□ -0.25
CHFR-216ENST00000538235 MYO15AQ9UKN7 3530 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 CACNA1HO95180 2353 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 TMEM110-MUSTN1A8MSY1 372 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 WASH3PC4AMC7 463 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 SGK1O00141 431 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 STK25O00506 426 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 PROSCO94903 275 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 CD48P09326 243 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 PABPC1P11940 636 aaKnown RBP13.49□□□□□ -0.25
CHFR-216ENST00000538235 GLDCP23378 1020 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 GRIA2P42262 883 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 WASP42768 502 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 RPS9P46781 194 aaKnown RBP13.49□□□□□ -0.25
CHFR-216ENST00000538235 MARCKSL1P49006 195 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 ARSEP51690 589 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 TSR1Q2NL82 804 aaKnown RBP13.49□□□□□ -0.25
CHFR-216ENST00000538235 C2orf27AQ580R0 203 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 MPP7Q5T2T1 576 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 TMEM92Q6UXU6 159 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 SLFN11Q7Z7L1 901 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 MFN1Q8IWA4 741 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms